prot_M-pyrifera_M_contig9367.21638.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9367.21638.1
Unique Nameprot_M-pyrifera_M_contig9367.21638.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length267
Homology
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BLAST of mRNA_M-pyrifera_M_contig9367.21638.1 vs. uniprot
Match: D7FIT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIT6_ECTSI)

HSP 1 Score: 168 bits (425), Expect = 1.430e-43
Identity = 94/177 (53.11%), Postives = 117/177 (66.10%), Query Frame = 0 
Query:    9 STLVFFLFVRQVVIPSNRHFWVGKALDAWVSPQKQAFFHLVESVLLLRFPSGLEASILAASIMAAARVQSEAEKASPSSPVPNLVGGSLMTCLGAFGGNMLASLLLETHNMILAEDLVFTVAVGTWALVGGRFWGSKAGSAFGLRTFFSLPVIHHALVLLAESFRASLVCWAVDSAR 185
            S +V FL VRQVV+ SNR FW  K L AWVS  +QAF        LL F  G EA   AA++++AARV+  AE  +P+ P+P L  GSL+TCLGAFGGN+LA L+  T +M+L   +V+  AV  W LVGGR W  + G AF LR   SLPV HH LV L+E+FRASL+C A+D AR
Sbjct:  794 SAVVAFL-VRQVVLESNRAFWATKVLGAWVSHGRQAF--------LLSFRFGPEAGAFAAAVVSAARVRHLAEMRTPAYPLPGLALGSLLTCLGAFGGNVLACLVTGTRSMVLTGFVVWPAAVAAWVLVGGRLWAPRPGRAFSLRDLLSLPVAHHLLVFLSEAFRASLLCGAIDVAR 961
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BLAST of mRNA_M-pyrifera_M_contig9367.21638.1 vs. uniprot
Match: A0A6H5JCS4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS4_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 1.440e-31
Identity = 76/152 (50.00%), Postives = 97/152 (63.82%), Query Frame = 0 
Query:   34 LDAWVSPQKQAFFHLVESVLLLRFPSGLEASILAASIMAAARVQSEAEKASPSSPVPNLVGGSLMTCLGAFGGNMLASLLLETHNMILAEDLVFTVAVGTWALVGGRFWGSKAGSAFGLRTFFSLPVIHHALVLLAESFRASLVCWAVDSAR 185
            L+ W  P     F LV    LL F  G EA   AA++++AARV+  AE   P+ P+P +  GSL+TCLGAFGGN+LA L+  T +M+L E +V+  AV  W LVGGR      G AF LR   SLPV+HH LV L+E+FRASL+C A+D AR
Sbjct:  397 LETWALPLAVVAF-LVRQAFLLSFRFGPEAGAFAAAVVSAARVRHLAEMRRPAYPLPGVALGSLLTCLGAFGGNVLACLVTGTRSMVLTEFVVWPAAVAAWMLVGGR-----PGRAFSLRDLLSLPVVHHLLVFLSEAFRASLLCGAIDVAR 542
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9367.21638.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIT6_ECTSI1.430e-4353.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCS4_9PHAE1.440e-3150.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..113
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 261..267
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 114..124
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 238..260
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 193..213
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 125..143
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 182..192
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 214..237
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 144..154
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 155..181
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.612
NoneNo IPR availableTMHMMTMhelixcoord: 158..180
NoneNo IPR availableTMHMMTMhelixcoord: 238..260
NoneNo IPR availableTMHMMTMhelixcoord: 121..143
NoneNo IPR availableTMHMMTMhelixcoord: 193..215
NoneNo IPR availableTMHMMTMhelixcoord: 92..114
NoneNo IPR availableTMHMMTMhelixcoord: 5..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9367contigM-pyrifera_M_contig9367:2481..10406 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9367.21638.1mRNA_M-pyrifera_M_contig9367.21638.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9367 2481..10406 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9367.21638.1 ID=prot_M-pyrifera_M_contig9367.21638.1|Name=mRNA_M-pyrifera_M_contig9367.21638.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=267bp
MSTFPLNLSTLVFFLFVRQVVIPSNRHFWVGKALDAWVSPQKQAFFHLVE
SVLLLRFPSGLEASILAASIMAAARVQSEAEKASPSSPVPNLVGGSLMTC
LGAFGGNMLASLLLETHNMILAEDLVFTVAVGTWALVGGRFWGSKAGSAF
GLRTFFSLPVIHHALVLLAESFRASLVCWAVDSARAPPQSGEASSWVLPV
SAGVLAGCGGMFFSCCRGVSLLSNGVPWAMQSALYGSVYYYCAGVSAGAR
AGGVVFTVGFQTVEMRR
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