prot_M-pyrifera_M_contig93669.21637.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig93669.21637.1
Unique Nameprot_M-pyrifera_M_contig93669.21637.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length204
Homology
BLAST of mRNA_M-pyrifera_M_contig93669.21637.1 vs. uniprot
Match: A0A812YM61_9DINO (RBM19 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812YM61_9DINO)

HSP 1 Score: 135 bits (339), Expect = 2.590e-33
Identity = 78/203 (38.42%), Postives = 116/203 (57.14%), Query Frame = 0
Query:    1 GVGKGLSSYQRKKEEERKKLAVSGGEEGVWNALLVKQNTMLHAAAKHLGMKEGEVLGMGMEGGEGXXXXXXNVAVRAALGEAGAIAELKTFLQREGIDIEAVTKALHNPSTSSSSSSSPTILRSDRILIAKNLPPETTTSALRSLFSRHGALVRLVLPPSKAIAIIEFVDASSAKQAFSTLAYSRFLRAPLLLEWAPQEIIKG 203
            G   G S ++  +E +RK  AVSG E  VWN+L  +Q+T++ A A   G   G +  M  E G        N+AVR ALGE   IAE K FL   GI ++ +  +L   + +          RS   L+ KNLP E T ++L+ +F R+G L+R+V+PP++A+A++E+  A  AK  F+ LAYS+++  PL LEWAP  ++ G
Sbjct:  158 GDSAGQSGFKADREAKRKAAAVSGAEAPVWNSLFARQDTLVAALAAKTGQSAGAI--MDKEAG--------NMAVRVALGETAIIAETKQFLADAGISLDVMEASLRGEAPA----------RSKTTLLVKNLPYEATVASLQEIFGRYGLLLRVVMPPTRAVAVVEYDSAKCAKAGFAALAYSKYMGVPLYLEWAPVGLVTG 340          
BLAST of mRNA_M-pyrifera_M_contig93669.21637.1 vs. uniprot
Match: A0A067CYA7_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CYA7_SAPPC)

HSP 1 Score: 132 bits (333), Expect = 2.890e-32
Identity = 78/196 (39.80%), Postives = 117/196 (59.69%), Query Frame = 0
Query:    8 SYQRKKEEERKKLAVSGGEEGVWNALLVKQNTMLHAAAKHLGMKEGEVLGMGMEGGEGXXXXXXNVAVRAALGEAGAIAELKTFLQREGIDIEAVTKALHNPSTSSSSSSSPTILRSDRILIAKNLPPETTTSALRSLFSRHGALVRLVLPPSKAIAIIEFVDASSAKQAFSTLAYSRFLRAPLLLEWAPQEIIKG 203
            +Y++KKE ERK+LA S   +  WNA  ++ +  + A A  L +K+GE+L               N+AVR A+GE   + E + F ++EG+D+  +  A      ++     P++ RS+ +L+ KNLP  T  +AL  LF  +G L R VLPPSK +A+IEFV+AS A++AF +LAY +F   PL LEWAP ++ KG
Sbjct:  369 TYKQKKEIERKQLAAS---KVGWNASFIRGDATVDALASRLNVKKGEIL----------DKDAGNMAVRLAIGETMLLQENQAFFEQEGVDLRVIEGA-----AAAKGKKGPSVERSNTVLLVKNLPFTTDETALAQLFRTYGELSRFVLPPSKTMALIEFVEASEARKAFRSLAYKKFQTMPLYLEWAPVKVFKG 546          
BLAST of mRNA_M-pyrifera_M_contig93669.21637.1 vs. uniprot
Match: A0A7S3R755_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3R755_DUNTE)

HSP 1 Score: 128 bits (322), Expect = 6.280e-31
Identity = 75/199 (37.69%), Postives = 116/199 (58.29%), Query Frame = 0
Query:    3 GKGL-SSYQRKKEEERKKLAVSGGEEGVWNALLVKQNTMLHAAAKHLGMKEGEVLGMGMEGGEGXXXXXXNVAVRAALGEAGAIAELKTFLQREGIDIEAVTKALHNPSTSSSSSSSPTILRSDRILIAKNLPPETTTSALRSLFSRHGALVRLVLPPSKAIAIIEFVDASSAKQAFSTLAYSRFLRAPLLLEWAPQEI 200
            GKG  SS++ ++E++RK  A   G    WN+L ++ +T+  A A H G+ + E++     G         ++AVR ALGEA  +A+ K  L  EG+D+  +  A    + S  +++   + RSDR ++ KNLP   +   L ++FSR G L RLVLPPS A+A++E+ +   A+ AF  LAY ++   PL LEWAPQ+I
Sbjct:  152 GKGAGSSFKTEREQQRKNDA---GNRAAWNSLFIRPDTVAEAVAAHYGVSKSELMDAHAAG---------DLAVRMALGEAAVVAQTKAALAEEGVDVSKLEAAA---AASGKAAAVKAVARSDRTVLVKNLPYSASEEELHAMFSRCGPLARLVLPPSHALALVEYNEPQDARSAFKALAYKKYQHVPLYLEWAPQDI 335          
BLAST of mRNA_M-pyrifera_M_contig93669.21637.1 vs. uniprot
Match: A0A2R5G9J9_9STRA (Multiple RNA-binding domain-containing protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G9J9_9STRA)

HSP 1 Score: 128 bits (322), Expect = 8.620e-31
Identity = 74/195 (37.95%), Postives = 116/195 (59.49%), Query Frame = 0
Query:    7 SSYQRKKEEERKKLAVSGGEEGVWNALLVKQNTMLHAAAKHLGMKEGEVLGMGMEGGEGXXXXXXNVAVRAALGEAGAIAELKTFLQREGIDIEAVTKALHNPSTSSSSSSSPTILRSDRILIAKNLPPETTTSALRSLFSRHGALVRLVLPPSKAIAIIEFVDASSAKQAFSTLAYSRFLRAPLLLEWAPQEII 201
            +S++ KKE ERK+ A    +   WNAL V+ +  + A A  LG+ +G++L  G EG +       + AVR AL E   IAE K FL  EG+D++ + + + +P++         + RS    + KNLP ET  S LR +F+R G + + VLPPS+ +A+++F +  +AK+AFS +AY R+ R P+ LEWAP  ++
Sbjct:  333 TSFKAKKEAERKEQA---SDSRSWNALFVRGDAAVGAVADDLGVSKGDLLLGGDEGDK------TSAAVRMALSETRVIAETKAFLADEGVDVDLLEQGVRDPAS---------VKRSKDTFLVKNLPAETDKSQLRQMFARFGDVEKFVLPPSRTMALVQFFEPKNAKRAFSGMAYKRYKRVPIYLEWAPANVL 509          
BLAST of mRNA_M-pyrifera_M_contig93669.21637.1 vs. uniprot
Match: A0A7S2R930_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2R930_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.130e-30
Identity = 83/201 (41.29%), Postives = 118/201 (58.71%), Query Frame = 0
Query:    5 GLSSYQRKKEEERKKLAVSGGEEGVWNALLVKQNTMLHAAAKHLGMKEGEVLGMGMEGGE----GXXXXXXNVAVRAALGEAGAIAELKTFLQREGIDIEAVTKALHNPSTSSSSSSSPTILRSDRILIAKNLPPETTTSALRSLFSRHGALVRLVLPPSKAIAIIEFVDASSAKQAFSTLAYSRFLRAPLLLEWAPQEII 201
            G +SY+ KKE ERK+ A   G+   WN+L ++ +  + A A  LG+ +GE+L +G E  +     XXXXX + AVR AL E   IAE K FL+ EG+DI+ + + +  P T         + RS    + KNLP ET    LR +F++ G L + VLPPSK +A+  +  A  AK+AF  LAY R+ R PL LEWAP+ ++
Sbjct:  301 GKTSYKAKKEAERKEKA---GDSKSWNSLFIRGDAAIGAVADQLGVDKGELL-LGNEDSDEXXXXXXXXXTSAAVRMALSETRVIAETKRFLEDEGVDIKLLEQGVREPGT---------VPRSKTCFLVKNLPHETDGGQLRQMFAKFGDLEKFVLPPSKTMALTSYFSAKQAKRAFRGLAYKRYKRVPLYLEWAPENVL 488          
BLAST of mRNA_M-pyrifera_M_contig93669.21637.1 vs. uniprot
Match: A0A5A8DZP9_CAFRO (Uncharacterized protein n=6 Tax=Sar TaxID=2698737 RepID=A0A5A8DZP9_CAFRO)

HSP 1 Score: 128 bits (321), Expect = 1.240e-30
Identity = 78/196 (39.80%), Postives = 103/196 (52.55%), Query Frame = 0
Query:    2 VGKGLSSYQRKKEEERKKLAVSGGEEGVWNALLVKQNTMLHAAAKHLGMKEGEVLGMGMEGGEGXXXXXXNVAVRAALGEAGAIAELKTFLQREGIDIEAVTKALHNPSTSSSSSSSPTILRSDRILIAKNLPPETTTSALRSLFSRHGALVRLVLPPSKAIAIIEFVDASSAKQAFSTLAYSRFLRAPLLLEWAP 197
             G G+S YQ  K            E   WN L V+ +  + AAA   G   GEVL    +          N+AVR ALGE   I + K+FL+ +G+D+ A+  AL      +S       +RSD +++ KNLP   +  ALR LF R G LVRLVLPP+K +A++EF     AK+AF  LAY R+   PL LEWAP
Sbjct:  445 AGPGVSEYQAAKXXXXXXXXXXXXEAAAWNGLFVRADAAVKAAAAAAGKSAGEVLDPSAD----------NLAVRVALGETAVIDQTKSFLRAQGVDLAALQLALGGKKLRAS-------MRSDTVILVKNLPAAASAPALRGLFGRFGPLVRLVLPPAKVLAVVEFERPVDAKRAFKGLAYKRYESVPLYLEWAP 623          
BLAST of mRNA_M-pyrifera_M_contig93669.21637.1 vs. uniprot
Match: A0A8J4B254_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B254_9CHLO)

HSP 1 Score: 128 bits (321), Expect = 1.260e-30
Identity = 75/196 (38.27%), Postives = 112/196 (57.14%), Query Frame = 0
Query:    5 GLSSYQRKKEEERKKLAVSGGEEGVWNALLVKQNTMLHAAAKHLGMKEGEVLGMGMEGGEGXXXXXXNVAVRAALGEAGAIAELKTFLQREGIDIEAVTKALHNPSTSSSSSSSPTILRSDRILIAKNLPPETTTSALRSLFSRHGALVRLVLPPSKAIAIIEFVDASSAKQAFSTLAYSRFLRAPLLLEWAPQEI 200
            G SS++ ++E +RK      G    WN L ++ +T+  A A H G+ +  +L     GG+G      +VAVR ALGEA  IA  K  L   G+ +EA+ +A    + S  +S++ ++ RS   L+ KNLP       L  LF R G L RLVLPP++A+A++EF +A  A+ AF +LAY ++   PL LEWAP ++
Sbjct:  543 GTSSFKAQREAQRK---ADAGNRAAWNTLFMRPDTVADAVAAHYGLSKAALLDPSATGGKGAD----SVAVRMALGEAQVIAATKQALAEAGVSVEALERAA---AASGKASTTRSVARSSTTLLVKNLPFSADEDELAELFGRCGPLARLVLPPARALALVEFTEAQDARAAFRSLAYKKYQHVPLYLEWAPADV 728          
BLAST of mRNA_M-pyrifera_M_contig93669.21637.1 vs. uniprot
Match: A0A8J4CCB9_9CHLO (Uncharacterized protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CCB9_9CHLO)

HSP 1 Score: 128 bits (321), Expect = 1.270e-30
Identity = 75/196 (38.27%), Postives = 113/196 (57.65%), Query Frame = 0
Query:    5 GLSSYQRKKEEERKKLAVSGGEEGVWNALLVKQNTMLHAAAKHLGMKEGEVLGMGMEGGEGXXXXXXNVAVRAALGEAGAIAELKTFLQREGIDIEAVTKALHNPSTSSSSSSSPTILRSDRILIAKNLPPETTTSALRSLFSRHGALVRLVLPPSKAIAIIEFVDASSAKQAFSTLAYSRFLRAPLLLEWAPQEI 200
            G SS++ ++E +RK      G    WN L ++ +T+  A A H G+ +  +L     GG+G      +VAVR ALGEA  IA  K  L   G+++EA+ +A    + S  +S++ ++LRS   L+ KNLP       L  LF R G L RLVLPP++A+A++EF +   A+ AF +LAY ++   PL LEWAP ++
Sbjct:  555 GTSSFKAQREAQRK---ADAGNRAAWNTLFMRPDTVADAVAAHYGLSKAALLDPSATGGKGAD----SVAVRMALGEAQVIAATKHALAEAGVNVEALERAA---AASGKASTARSVLRSSTTLLVKNLPYSADEDELAELFGRCGPLARLVLPPARALALVEFTEPQDARAAFRSLAYKKYHHVPLYLEWAPADV 740          
BLAST of mRNA_M-pyrifera_M_contig93669.21637.1 vs. uniprot
Match: A0A1W0A677_9STRA (RNA-binding protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A677_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.330e-30
Identity = 77/196 (39.29%), Postives = 112/196 (57.14%), Query Frame = 0
Query:    8 SYQRKKEEERKKLAVSGGEEGVWNALLVKQNTMLHAAAKHLGMKEGEVLGMGMEGGEGXXXXXXNVAVRAALGEAGAIAELKTFLQREGIDIEAVTKALHNPSTSSSSSSSPTILRSDRILIAKNLPPETTTSALRSLFSRHGALVRLVLPPSKAIAIIEFVDASSAKQAFSTLAYSRFLRAPLLLEWAPQEIIKG 203
            +Y++KKE ERK+LA     +  WNA  ++ +  + A A  L +K+GE+L               N+AVR A+GE   + E + F ++EG+D+  +          S++ S     RS  +L+ KNLP  T   AL  LF  HG L R +LPPSK +A+IEFV+AS A++AF +LAY +F   PL LEWAP ++ KG
Sbjct: 1092 TYKQKKEIERKQLA---NNKVGWNASYIRGDATVDALASRLNVKKGEIL----------DKDAGNMAVRLAIGETMLLQENQAFFEQEGVDLSVIE--------GSTAKSKKATERSTTVLLIKNLPFSTDEVALAQLFRTHGELTRFILPPSKTMALIEFVEASEARKAFRSLAYKKFQNVPLYLEWAPVKVFKG 1266          
BLAST of mRNA_M-pyrifera_M_contig93669.21637.1 vs. uniprot
Match: A0A836B973_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836B973_9CHLO)

HSP 1 Score: 127 bits (320), Expect = 1.720e-30
Identity = 75/199 (37.69%), Postives = 111/199 (55.78%), Query Frame = 0
Query:    5 GLSSYQRKKEEERKKLAVSGGEEGVWNALLVKQNTMLHAAAKHLGMKEGEVLGMGMEGGEGXXXXXXNVAVRAALGEAGAIAELKTFLQREGIDIEAVTKALHNPSTSSSSSSSPTILRSDRILIAKNLPPETTTSALRSLFSRHGALVRLVLPPSKAIAIIEFVDASSAKQAFSTLAYSRFLRAPLLLEWAPQEIIKG 203
            G SS++  +E +RK      G    WN L ++ +T+  A A H G+ +  +L     GG+G      +VAVR ALGEA  IA  K  L   G+ +EA+ +A    + S  +S+S  + RS   L+ KNLP       L ++F R G + RLVLPP+KA+A++EF +   A+ AF +LAY ++   PL LEWAP ++  G
Sbjct:  536 GTSSFKAAREAQRK---ADAGNRAAWNTLFMRADTVAEAVAAHYGLSKAALLDASAGGGKGGD----SVAVRMALGEAQVIAATKQALAEAGVSVEALERAA---AASGKASASKAVARSPTTLLVKNLPFSADEDELLAVFGRCGPVARLVLPPAKALALVEFTEPQDARSAFRSLAYKKYHHVPLYLEWAPADVFSG 724          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93669.21637.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812YM61_9DINO2.590e-3338.42RBM19 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A067CYA7_SAPPC2.890e-3239.80Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A7S3R755_DUNTE6.280e-3137.69Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
A0A2R5G9J9_9STRA8.620e-3137.95Multiple RNA-binding domain-containing protein 1 n... [more]
A0A7S2R930_9STRA1.130e-3041.29Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A5A8DZP9_CAFRO1.240e-3039.80Uncharacterized protein n=6 Tax=Sar TaxID=2698737 ... [more]
A0A8J4B254_9CHLO1.260e-3038.27Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
A0A8J4CCB9_9CHLO1.270e-3038.27Uncharacterized protein n=2 Tax=Volvox reticulifer... [more]
A0A1W0A677_9STRA1.330e-3039.29RNA-binding protein n=1 Tax=Thraustotheca clavata ... [more]
A0A836B973_9CHLO1.720e-3037.69Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 127..194
e-value: 1.0E-6
score: 38.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 131..182
e-value: 2.5E-8
score: 33.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 126..198
score: 10.616
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 118..203
e-value: 4.0E-19
score: 70.6
NoneNo IPR availablePANTHERPTHR23147SERINE/ARGININE RICH SPLICING FACTORcoord: 7..202
NoneNo IPR availablePANTHERPTHR23147:SF48RNA-BINDING PROTEIN 19-RELATEDcoord: 7..202
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 112..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93669contigM-pyrifera_M_contig93669:49..660 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93669.21637.1mRNA_M-pyrifera_M_contig93669.21637.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig93669 49..660 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig93669.21637.1 ID=prot_M-pyrifera_M_contig93669.21637.1|Name=mRNA_M-pyrifera_M_contig93669.21637.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=204bp
GVGKGLSSYQRKKEEERKKLAVSGGEEGVWNALLVKQNTMLHAAAKHLGM
KEGEVLGMGMEGGEGGGDGGGNVAVRAALGEAGAIAELKTFLQREGIDIE
AVTKALHNPSTSSSSSSSPTILRSDRILIAKNLPPETTTSALRSLFSRHG
ALVRLVLPPSKAIAIIEFVDASSAKQAFSTLAYSRFLRAPLLLEWAPQEI
IKGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf