prot_M-pyrifera_M_contig93488.21591.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig93488.21591.1
Unique Nameprot_M-pyrifera_M_contig93488.21591.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length201
Homology
BLAST of mRNA_M-pyrifera_M_contig93488.21591.1 vs. uniprot
Match: A0A5A8C4Z3_CAFRO (Rab-GAP TBC domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C4Z3_CAFRO)

HSP 1 Score: 197 bits (500), Expect = 1.400e-57
Identity = 106/202 (52.48%), Postives = 121/202 (59.90%), Query Frame = 0
Query:    4 VNRFGFLVDAGLDSDVPG-----AAASRATVLDAGEVRLEVKRAAKWRDMLRGWPRFAREQPGKLKSRVRKGIPDCMRGVAWPKLVGADRLRRDNPGRYAALLTLRPRAEDAAYIERDLTRTYPRHVLFRERDGFGQRALRRILRAYAVLDVEVGYCQGMAFVAGVLLSYLAEEDAFWTFVAALHRRGLRDLYLPGLPMLQE 200
            VNRFGF      D D        AAA+  T +   E R E  R  KWR ML  W  F R  P  +K RVRKGIPD +RG+ WP L G D L R +P  Y  LL   PR +D A I  DL RT+PRH  F+E  G GQ AL R+LRAYA  D EVGYCQGMAFVA +L++Y+ EE AFWT VA L RRGLR  YLP  P+  E
Sbjct:   62 VNRFGFFTADDNDEDARSGPSDEAAAAAPTPVTRAEARRENARTEKWRVMLANWGVFTRRHPATVKRRVRKGIPDSLRGIVWPVLAGGDELARRHPSMYRRLLMAAPREDDFAVIRNDLFRTFPRHEQFKEEGGPGQLALMRVLRAYAAYDTEVGYCQGMAFVAALLITYMPEEIAFWTLVAVLRRRGLRGHYLPQFPLYLE 263          
BLAST of mRNA_M-pyrifera_M_contig93488.21591.1 vs. uniprot
Match: A0A5A8CYX9_CAFRO (Rab-GAP TBC domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CYX9_CAFRO)

HSP 1 Score: 177 bits (448), Expect = 8.060e-52
Identity = 87/153 (56.86%), Postives = 100/153 (65.36%), Query Frame = 0
Query:   48 MLRGWPRFAREQPGKLKSRVRKGIPDCMRGVAWPKLVGADRLRRDNPGRYAALLTLRPRAEDAAYIERDLTRTYPRHVLFRERDGFGQRALRRILRAYAVLDVEVGYCQGMAFVAGVLLSYLAEEDAFWTFVAALHRRGLRDLYLPGLPMLQE 200
            ML  W  F R  P  +K RVRKGIPD +RG+ WP L G D L R +P  Y  LL   PR +D A I  DL RT+PRH  F+E  G GQ AL R+LRAYA  D EVGYCQGMAFVA +L++Y+ EE AFWT VA L RRGLR  YLP  P+  E
Sbjct:    1 MLANWGVFTRRHPATVKRRVRKGIPDSLRGIVWPVLAGGDELARRHPSMYRRLLMAAPREDDFAVIRNDLFRTFPRHEQFKEEGGPGQLALMRVLRAYAAYDTEVGYCQGMAFVAALLITYMPEEIAFWTLVAVLRRRGLRGHYLPQFPLYLE 153          
BLAST of mRNA_M-pyrifera_M_contig93488.21591.1 vs. uniprot
Match: A0A7S1CR22_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CR22_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.260e-46
Identity = 90/200 (45.00%), Postives = 114/200 (57.00%), Query Frame = 0
Query:    4 VNRFGFLVDAGLDSDVPGAAASRATVLDAGEVRLEVKRAAKWRDMLR----GWPRFAREQPGKLKSRVRKGIPDCMRGVAWPKLVGADRLRRDNPGRYAALLTLRPRAEDAAYIERDLTRTYPRHVLFRERDGFGQRALRRILRAYAVLDVEVGYCQGMAFVAGVLLSYLAEEDAFWTFVAALHRRGLRDLYLPGLPMLQ 199
            ++R+GF V    D D+     +R    D    RLE  R  KWR ML      W R  ++ P K+K R+RKGIPD +RG  W  L G+   R DNPG YA L         A+ I+RD+ RT+P H +FR     GQ ALR +LRAY+    +VGYCQGM F+AG+LLSY+ EEDAFW     +H  G+  LY PGLP  Q
Sbjct:  199 LDRYGFYVSGEGDDDLSAEELARRAAADKAAARLENLRLEKWRAMLGPGLVNWARVVQKSPNKVKRRIRKGIPDALRGRLWLLLSGSTEARSDNPGVYATLRAAET-VPHASTIDRDIARTFPTHYMFRSAATGGQTALRNVLRAYSAFRPDVGYCQGMGFIAGLLLSYVPEEDAFWMLTTLMHAYGMEGLYRPGLPRFQ 397          
BLAST of mRNA_M-pyrifera_M_contig93488.21591.1 vs. uniprot
Match: A8J6S1_CHLRE (RabGAP/TBC protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8J6S1_CHLRE)

HSP 1 Score: 164 bits (415), Expect = 5.990e-46
Identity = 96/200 (48.00%), Postives = 127/200 (63.50%), Query Frame = 0
Query:    4 VNRFGFLVDAGLDSDVPGAAASRATVLDAGEVRLEVKRAAKWRDML----RGWPRFAREQPGKLKSRVRKGIPDCMRGVAWPKLVGADRLRRDNPGRYAALLTLRPRAEDAAYIERDLTRTYPRHVLFRERDGFGQRALRRILRAYAVLDVEVGYCQGMAFVAGVLLSYLAEEDAFWTFVAALHRRGLRDLYLPGLPMLQ 199
            ++RFGF+V   L +  P A + + +     + +  V+R  KWR ML     G   + R +P KLK RVRKGIP+ +RG+AW  L G  +LR  NPG +AAL +  P+    A I RDL RTYP H+ F +R G GQRAL  +LRAYAV D +VGY QGM F+A VLL Y+  E+AFWT VA +  +GL+ LY+PG+P LQ
Sbjct:   23 IDRFGFIVP--LPAGTPAAGSKQRS-----KEQQAVERLRKWRKMLGANGSGLEEYRRRRPDKLKRRVRKGIPEPLRGLAWHVLSGGRKLRLANPGIFAAL-SQHPQTAPTAAIMRDLNRTYPTHIYFTQRQGPGQRALYSVLRAYAVYDSKVGYVQGMGFLAAVLLLYMDAEEAFWTLVAVM--KGLQRLYMPGMPGLQ 212          
BLAST of mRNA_M-pyrifera_M_contig93488.21591.1 vs. uniprot
Match: A0A6G0XPR2_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPR2_9STRA)

HSP 1 Score: 159 bits (403), Expect = 5.210e-44
Identity = 92/208 (44.23%), Postives = 125/208 (60.10%), Query Frame = 0
Query:    2 SGVNRFGFLV-DAGLDSDVPGAAASRATVLDAGEVRLEVKRAAKWRDMLRG-----WPRFAREQPGKLKSRVRKGIPDCMRGVAWPKLVGADRLRRDNPGRYAALL-TLRPRAEDAAYIERDLTRTYPRHVLFRERDGFGQRALRRILRAYAVLDVEVGYCQGMAFVAGVLLSYLAEEDAFWTFVAALHRR--GLRDLYLPGLPMLQE 200
            S V+R+GFLV D           +   T  D+  V LE +R  KW  M  G     W R  ++QP KLKSRVRKGIPD +RG+AWP L G+  + ++NPG Y  L+ T +   ED   I RD+ RT+P+H LF++    GQ AL  +L+AY+V D  VGYCQGM F++ + LSY+ EE  FW  VA L+ +  G+ D+Y PG+P + E
Sbjct:   44 SPVDRYGFLVSDKRYSPQARQVKSPSETPKDS--VWLENRRTQKWMSMTGGISIEDWERTKQKQPAKLKSRVRKGIPDAIRGIAWPHLAGSSLMMKNNPGMYRDLVATTQVPCEDT--ILRDIGRTFPKHHLFKDSTSIGQSALLNVLKAYSVYDPNVGYCQGMGFISALFLSYMPEEQTFWHLVACLNHKKYGMADIYRPGMPRVVE 247          
BLAST of mRNA_M-pyrifera_M_contig93488.21591.1 vs. uniprot
Match: I0YTS5_COCSC (RabGAP/TBC n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YTS5_COCSC)

HSP 1 Score: 156 bits (394), Expect = 2.810e-43
Identity = 85/170 (50.00%), Postives = 108/170 (63.53%), Query Frame = 0
Query:   38 EVKRAAKWRDMLRG----WPRFAREQPGKLKSRVRKGIPDCMRGVAWPKLVGADRLRRDNPGRYAALLTLRPRAEDAAYIERDLTRTYPRHVLFRERDGFGQRALRRILRAYAVLDVEVGYCQGMAFVAGVLLSYLAEEDAFWTFVAALH---RRGLRDLYLPGLPMLQE 200
            +++R  KWR+ML G    W RF+   P  +K RVRKGIPD +RGVAW  L G   L   N G Y  L+ L   +E    I RDL+RTYP HV +++R G GQR+L  +LRAY+V D +VGY QGM F+AG+LL Y+ EEDAFWT  A L       L  L+ PGLP+LQ+
Sbjct:   11 QMQRLRKWRNMLGGGTADWKRFSARHPAMVKRRVRKGIPDRLRGVAWQLLSGGRELLLQNEGVYERLM-LAGSSEKELEIVRDLSRTYPSHVYYQQRQGPGQRSLFNVLRAYSVYDRQVGYVQGMGFIAGLLLLYMCEEDAFWTLTALLKGAVHAPLEGLFRPGLPLLQQ 179          
BLAST of mRNA_M-pyrifera_M_contig93488.21591.1 vs. uniprot
Match: A0A024UR51_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UR51_9STRA)

HSP 1 Score: 157 bits (396), Expect = 5.660e-43
Identity = 89/213 (41.78%), Postives = 124/213 (58.22%), Query Frame = 0
Query:    1 MSGVNRFGFLVD------AGLDSDVPGAAASRATVLDAGEVRLEVKRAAKWRDMLRG-----WPRFAREQPGKLKSRVRKGIPDCMRGVAWPKLVGADRLRRDNPGRYAALLTLRPRAEDAAYIERDLTRTYPRHVLFRERDGFGQRALRRILRAYAVLDVEVGYCQGMAFVAGVLLSYLAEEDAFWTFVAALHRR--GLRDLYLPGLPMLQE 200
            ++ ++R+GFL+          D D P   ++     D   V LE +R  KW  M  G     W R  ++Q  KLK RVRKGIPD +RG+AWP L G+  + ++NP  Y  LL   PRA     I RD+ RT+P+H LF++    GQ AL  +LRAY+V D  VGYCQGM F++ + LSY+ EE  FW  VA L+++  G+ D+Y PG+P + E
Sbjct:   42 VASIDRYGFLLTDKRFSPRANDRDKPNGHST-----DTDTVWLENRRTQKWIAMTGGVEIEDWERTKQKQAAKLKLRVRKGIPDAIRGIAWPHLAGSSLMMKNNPCLYRDLLAT-PRAPCEDTISRDIGRTFPKHHLFKDSTSLGQGALMNVLRAYSVYDPNVGYCQGMGFISALFLSYMPEEQTFWHVVACLNQKKYGMADIYRPGMPRVME 248          
BLAST of mRNA_M-pyrifera_M_contig93488.21591.1 vs. uniprot
Match: W4HB21_9STRA (Rab-GAP TBC domain-containing protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HB21_9STRA)

HSP 1 Score: 156 bits (394), Expect = 9.620e-43
Identity = 90/212 (42.45%), Postives = 125/212 (58.96%), Query Frame = 0
Query:    1 MSGVNRFGFLV-DAGLDSDVPGAAASRATVL----DAGEVRLEVKRAAKWRDMLRG-----WPRFAREQPGKLKSRVRKGIPDCMRGVAWPKLVGADRLRRDNPGRYAALLTLRPRAEDAAYIERDLTRTYPRHVLFRERDGFGQRALRRILRAYAVLDVEVGYCQGMAFVAGVLLSYLAEEDAFWTFVAALHRR--GLRDLYLPGLPMLQE 200
            ++ ++R+GFL+ D      V  A  SR +       +  V LE +R  KW  M  G     W R  ++Q  KLKSRVRKGIPD +RG+AWP L G+  + ++NP  Y  LL   P A     I RD+ RT+P+H LF++    GQ AL  +LRAY+V D  VGYCQGM F++ + LSY+ EE  FW  VA L+++  G+ D+Y PG+P + E
Sbjct:   31 VASIDRYGFLLADKRFSPRVNEAVKSRTSHPHHHPSSDTVWLENRRTQKWIAMTGGVDIEDWERTKQKQAAKLKSRVRKGIPDAIRGIAWPHLAGSSLMMKNNPCMYRDLLAT-PHAPCEDTISRDIGRTFPKHHLFKDATSLGQGALMNVLRAYSVYDPNVGYCQGMGFISALFLSYMPEEQTFWHVVACLNQKKYGMADMYRPGMPRVME 241          
BLAST of mRNA_M-pyrifera_M_contig93488.21591.1 vs. uniprot
Match: A0A068V5S2_COFCA (Rab-GAP TBC domain-containing protein n=5 Tax=Coffea TaxID=13442 RepID=A0A068V5S2_COFCA)

HSP 1 Score: 154 bits (390), Expect = 2.580e-42
Identity = 88/204 (43.14%), Postives = 121/204 (59.31%), Query Frame = 0
Query:    4 VNRFGFLVDAGLDSDVPGAAASRATVLDAGEVRLEVKRAAKWRDML----RGWPRFAREQPGKLKSRVRKGIPDCMRGVAWPKLVGADRLRRDNPGRYAALLTLRPRAEDAAYIERDLTRTYPRHVLFRERDGFGQRALRRILRAYAVLDVEVGYCQGMAFVAGVLLSYLAEEDAFWTFVAALH---RRGLRDLYLPGLPMLQE 200
            V+RFGF+      +   G   SR+    A E   E +R  KWR M+      W  + R +P  +K R+RKGIPDC+RG+ W  + G+  L   NPG Y  L+     A +   I RD++RT+P HV FR+R G GQR+L  +L+AY+V D +VGY QGM F+AG+LL Y++EEDAFW  VA L       +  LYL GLP++Q+
Sbjct:   20 VDRFGFVKQE--QNSAEGLCRSRS----ASEYEREERRIRKWRKMIGVGGSDWKHYIRRKPHVVKRRIRKGIPDCLRGLVWQLISGSRDLLLMNPGVYEQLVIYETSASELDII-RDISRTFPSHVFFRQRHGPGQRSLYNVLKAYSVFDRDVGYVQGMGFIAGLLLLYMSEEDAFWLLVALLKGAVHAPMEGLYLAGLPLVQQ 216          
BLAST of mRNA_M-pyrifera_M_contig93488.21591.1 vs. uniprot
Match: A0A5B6ZVU8_DAVIN (Putative EVI5-like protein isoform X1 n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6ZVU8_DAVIN)

HSP 1 Score: 154 bits (390), Expect = 2.950e-42
Identity = 91/204 (44.61%), Postives = 123/204 (60.29%), Query Frame = 0
Query:    4 VNRFGFLVDAGLDSDVPGAAASRATVLDAGEVRLEVKRAAKWRDML----RGWPRFAREQPGKLKSRVRKGIPDCMRGVAWPKLVGADRLRRDNPGRYAALLTLRPRAEDAAYIERDLTRTYPRHVLFRERDGFGQRALRRILRAYAVLDVEVGYCQGMAFVAGVLLSYLAEEDAFWTFVAALH---RRGLRDLYLPGLPMLQE 200
            V+RFGF V   L +   G A SR+    A E   E +R  KWR M+      W  + R +P  +K R+RKGIPDC+RG+ W  + G+  L   NPG Y  L+     A +   I RD++RT+P HV F++R G GQR+L  +L+AY+V D +VGY QGM FVAG+LL Y++EEDAFW  VA L       +  LYL GLP++Q+
Sbjct:   19 VDRFGF-VKHELSNSPEGIAKSRS----AFEFEREERRIRKWRKMIGVGGSDWKHYVRRKPHVVKRRIRKGIPDCLRGLVWQLISGSRDLLLMNPGVYEQLVIYETSASELDII-RDISRTFPSHVFFQQRHGPGQRSLYNVLKAYSVYDRDVGYVQGMGFVAGLLLLYMSEEDAFWLLVALLKGAVHAPMEGLYLVGLPLVQQ 216          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93488.21591.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8C4Z3_CAFRO1.400e-5752.48Rab-GAP TBC domain-containing protein n=2 Tax=Cafe... [more]
A0A5A8CYX9_CAFRO8.060e-5256.86Rab-GAP TBC domain-containing protein n=1 Tax=Cafe... [more]
A0A7S1CR22_9STRA1.260e-4645.00Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A8J6S1_CHLRE5.990e-4648.00RabGAP/TBC protein n=1 Tax=Chlamydomonas reinhardt... [more]
A0A6G0XPR2_9STRA5.210e-4444.23Rab-GAP TBC domain-containing protein n=1 Tax=Apha... [more]
I0YTS5_COCSC2.810e-4350.00RabGAP/TBC n=1 Tax=Coccomyxa subellipsoidea (strai... [more]
A0A024UR51_9STRA5.660e-4341.78Rab-GAP TBC domain-containing protein n=1 Tax=Apha... [more]
W4HB21_9STRA9.620e-4342.45Rab-GAP TBC domain-containing protein n=11 Tax=Aph... [more]
A0A068V5S2_COFCA2.580e-4243.14Rab-GAP TBC domain-containing protein n=5 Tax=Coff... [more]
A0A5B6ZVU8_DAVIN2.950e-4244.61Putative EVI5-like protein isoform X1 n=1 Tax=Davi... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 67..200
e-value: 1.5E-4
score: 14.9
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 73..199
e-value: 2.2E-27
score: 96.2
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 70..200
score: 22.487
NoneNo IPR availableGENE3D1.10.10.750coord: 42..86
e-value: 8.2E-7
score: 31.0
NoneNo IPR availableGENE3D1.10.8.270coord: 91..183
e-value: 4.8E-29
score: 102.1
NoneNo IPR availablePANTHERPTHR22957:SF491coord: 4..199
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 4..199
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 48..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93488contigM-pyrifera_M_contig93488:122..724 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93488.21591.1mRNA_M-pyrifera_M_contig93488.21591.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig93488 122..724 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig93488.21591.1 ID=prot_M-pyrifera_M_contig93488.21591.1|Name=mRNA_M-pyrifera_M_contig93488.21591.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=201bp
MSGVNRFGFLVDAGLDSDVPGAAASRATVLDAGEVRLEVKRAAKWRDMLR
GWPRFAREQPGKLKSRVRKGIPDCMRGVAWPKLVGADRLRRDNPGRYAAL
LTLRPRAEDAAYIERDLTRTYPRHVLFRERDGFGQRALRRILRAYAVLDV
EVGYCQGMAFVAGVLLSYLAEEDAFWTFVAALHRRGLRDLYLPGLPMLQE
*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR035969Rab-GTPase_TBC_sf