prot_M-pyrifera_M_contig9238.21379.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9238.21379.1
Unique Nameprot_M-pyrifera_M_contig9238.21379.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length272
Homology
BLAST of mRNA_M-pyrifera_M_contig9238.21379.1 vs. uniprot
Match: D8LGL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGL9_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 4.170e-119
Identity = 185/274 (67.52%), Postives = 212/274 (77.37%), Query Frame = 0
Query:    1 MSCLEGGSIVCTDSL--SNLGTSSLSCPSLCHPFLKTKFQIGSVKGPKNFGSTQTVFHKDDVPTKRRERKKDVNEWKGRRILAMGQPPAWSSSVALDPARLKNARTKSNSNLDPGKPYQYNYRAEALPPKSPYPVPRPHRFKVSCVTEAEAEKRRLERAGYPDNALNHPKRLVEMPVNRSLDDMEAWNHSTQLDAPQRRRTLEDYEAACKLAATRRARHLRAYTAPEQRGKEQRQRIRQLKSEGRLWTLRGPEPLPLGPTHNRLARDPIRRYGQ 272
            MS L GGS + T++L  ++LG SSL+  S C PFLKTKFQIGSVKGPKNF S QTVFH+DDVP  +RERKK+V EWK RRIL MG+PP WSSSV LDP R+K ARTKSNS LDPGKPYQYNYRAE LPPKSP PVP+ + F+VS VT  EA +RR+ RA YPDNAL HPKR+ EMP N+ LD    WN STQ +A +RRR  ++YEAACKLA  R+   LR YTAPEQR KEQ+Q IR+LK EGRLW L+  EP PL PTHNRLA+DPIRR  Q
Sbjct:    1 MSVLGGGSSLDTEALLLNDLGASSLASTSSCRPFLKTKFQIGSVKGPKNFSSDQTVFHRDDVPATKRERKKEVKEWKERRILRMGRPPGWSSSVTLDPTRMKFARTKSNSELDPGKPYQYNYRAEVLPPKSPDPVPKSNMFQVSGVTNEEAARRRILRAKYPDNALEHPKRIEEMPSNKRLDGKIRWNPSTQCNARERRRARDEYEAACKLATARKNGTLRNYTAPEQREKEQQQWIRKLKVEGRLWALKEREPSPLLPTHNRLAKDPIRRIRQ 274          
BLAST of mRNA_M-pyrifera_M_contig9238.21379.1 vs. uniprot
Match: A0A7S3GX03_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GX03_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 5.380e-20
Identity = 79/253 (31.23%), Postives = 121/253 (47.83%), Query Frame = 0
Query:   30 HPFLKTKFQIGSVKGPKNFGSTQTVFHKDDVPTKRRERKKDVNEWKGRRILAMGQPPAWS-SSVALDPARLKNARTKSNSNLDPGKPYQYNYRAEALPP-KSPYPVPRPHRFKVSCVTEAEAEKRRLERAGYPDNALNHPKRLVEMPVNRSLDDMEAWNHSTQL-----DAPQRRRTLEDYEAACKLAATRRARHLRAYTAPEQRGKEQRQRIRQLKSEGRLWTLR-----GPEPLPLGPTHNRLARDPIRRY 270
            H FL++K QIG+VKGP ++  +QTVFH DD+P  +R R+ +V  W   ++L+  + P+W+ SS    P  ++  R   N   D G  YQYNYRAE L   +   P+ +P +F +S   E  A + +  R G       H  R  EMPV+  L D   W  ST++     D      TL+  ++  K+ +       + Y  P +   E +  IR+ K+EG     +     G EP+      NR+  +    Y
Sbjct:   22 HEFLRSKIQIGNVKGPVSYTQSQTVFHHDDIPETKRTRRNEVKAWAKSKLLS-AETPSWNKSSHPQQPVVVR--RQAENYCKDRGGAYQYNYRAETLDSLRQVEPIDKPTKFHISTQPETLALELKTIR-GTNRIQGGHFNRTGEMPVHPDLIDATPWKLSTEVVLKEKDQRLANMTLKAQQSTGKINSLSSTFKHKPYVGPLKAAAELQDLIRKQKAEGTFSLKKQVNRPGLEPVDRSKLKNRVPNETANVY 270          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9238.21379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGL9_ECTSI4.170e-11967.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3GX03_9STRA5.380e-2031.23Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9238contigM-pyrifera_M_contig9238:4392..10150 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9238.21379.1mRNA_M-pyrifera_M_contig9238.21379.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9238 4392..10150 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9238.21379.1 ID=prot_M-pyrifera_M_contig9238.21379.1|Name=mRNA_M-pyrifera_M_contig9238.21379.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=272bp
MSCLEGGSIVCTDSLSNLGTSSLSCPSLCHPFLKTKFQIGSVKGPKNFGS
TQTVFHKDDVPTKRRERKKDVNEWKGRRILAMGQPPAWSSSVALDPARLK
NARTKSNSNLDPGKPYQYNYRAEALPPKSPYPVPRPHRFKVSCVTEAEAE
KRRLERAGYPDNALNHPKRLVEMPVNRSLDDMEAWNHSTQLDAPQRRRTL
EDYEAACKLAATRRARHLRAYTAPEQRGKEQRQRIRQLKSEGRLWTLRGP
EPLPLGPTHNRLARDPIRRYGQ
back to top