prot_M-pyrifera_M_contig92085.21318.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig92085.21318.1
Unique Nameprot_M-pyrifera_M_contig92085.21318.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length188
Homology
BLAST of mRNA_M-pyrifera_M_contig92085.21318.1 vs. uniprot
Match: A0A2S8EYE0_9RHOB (LacI family transcriptional regulator n=1 Tax=Rhodobacteraceae bacterium WD3A24 TaxID=2086263 RepID=A0A2S8EYE0_9RHOB)

HSP 1 Score: 268 bits (686), Expect = 3.900e-87
Identity = 134/185 (72.43%), Postives = 152/185 (82.16%), Query Frame = 0
Query:    1 YSWLDVNNRSAFSRATDFLLDLGHRRIALINGLEAMDFAYRRRDGYERTLRARGIEPDTDLMRSDEMTEVYGYRSAREMMAHGAPPTAYLVSSIICAFGVRRAVEEAGLRIGRDISIITFDDELSYLKNGEDVPIFTAARSSVRDAGRQAGEMLLQLIENPEKMPLNLLLEAELMVGTSTGPAPQ 185
            Y WLDVNNR AF RAT FLLDLGHRRI L+NGLE MDFA RRRDGYER L  RG+  D  L+RSDEMTE YGYRS R+++A  APPTA+LVSS+I A G+RRA+EEAGLR+GRDIS+IT DD+LSYL+NG+DVP+FTA RSSVRDAGRQA EMLL +I  PE  P   LLEAEL VG STGPAP+
Sbjct:  157 YCWLDVNNRRAFQRATAFLLDLGHRRIGLLNGLEVMDFALRRRDGYERALAERGVPRDPALIRSDEMTEAYGYRSGRDLLALPAPPTAFLVSSMIAAIGLRRAIEEAGLRLGRDISVITHDDDLSYLRNGDDVPLFTATRSSVRDAGRQAAEMLLAIIAQPETAPRERLLEAELTVGQSTGPAPK 341          
BLAST of mRNA_M-pyrifera_M_contig92085.21318.1 vs. uniprot
Match: UPI000FDC9C72 (substrate-binding domain-containing protein n=1 Tax=Solirhodobacter olei TaxID=2493082 RepID=UPI000FDC9C72)

HSP 1 Score: 268 bits (685), Expect = 5.190e-87
Identity = 133/184 (72.28%), Postives = 154/184 (83.70%), Query Frame = 0
Query:    1 YSWLDVNNRSAFSRATDFLLDLGHRRIALINGLEAMDFAYRRRDGYERTLRARGIEPDTDLMRSDEMTEVYGYRSAREMMAHGAPPTAYLVSSIICAFGVRRAVEEAGLRIGRDISIITFDDELSYLKNGEDVPIFTAARSSVRDAGRQAGEMLLQLIENPEKMPLNLLLEAELMVGTSTGPAP 184
            YSWLDVNNR AF RAT+FL+DLGHRRIALINGLE MDFA RRR GYE   + RG+ PD  LMRSDEMTE YG+R+A E++A   PPTA+LVSS+I A GVRRA+EE GL++GRD+S+ITFDDELSYL+NGED+PIFTA RSSVR+AGRQA  ML+ LIE+P K PL  + EAELMVG STGPAP
Sbjct:  157 YSWLDVNNRRAFQRATNFLIDLGHRRIALINGLEYMDFAIRRRSGYENAHQERGLVPDPALMRSDEMTETYGHRAALELLAQPDPPTAFLVSSMIPAIGVRRAIEERGLKLGRDVSVITFDDELSYLRNGEDLPIFTATRSSVREAGRQAAAMLIDLIEDPAKEPLTRMFEAELMVGMSTGPAP 340          
BLAST of mRNA_M-pyrifera_M_contig92085.21318.1 vs. uniprot
Match: A0A0P1G5Q6_9RHOB (Raffinose operon repressor n=1 Tax=Tropicibacter naphthalenivorans TaxID=441103 RepID=A0A0P1G5Q6_9RHOB)

HSP 1 Score: 257 bits (657), Expect = 8.470e-83
Identity = 128/185 (69.19%), Postives = 154/185 (83.24%), Query Frame = 0
Query:    1 YSWLDVNNRSAFSRATDFLLDLGHRRIALINGLEAMDFAYRRRDGYERTLRARGIEPDTDLMRSDEMTEVYGYRSAREMMAHGAPPTAYLVSSIICAFGVRRAVEEAGLRIGRDISIITFDDELSYLKNGEDVPIFTAARSSVRDAGRQAGEMLLQLIENPEKMPLNLLLEAELMVGTSTGPAPQ 185
            YSWLD+NN  AF RAT+FLLDLGHRRIALINGLE MDFA+RRR+G+   L ARG+ PD  LMRS+EMTE+ G+RSA +M+A  +PPTA+LVSS+I A GVRRA+ EAGL +GRD+S+IT DD+L YLKNG DVPIFTA RSSVR AGR+A E+LL LI++P   PL  +LEAEL++GTSTGPAPQ
Sbjct:  157 YSWLDMNNVRAFERATEFLLDLGHRRIALINGLEFMDFAHRRREGFTAALTARGVAPDPALMRSEEMTEINGHRSAAQMLAQDSPPTAFLVSSMITAIGVRRAILEAGLVLGRDVSVITHDDDLGYLKNGSDVPIFTATRSSVRQAGRRAAELLLALIDDPGAGPLTDMLEAELIIGTSTGPAPQ 341          
BLAST of mRNA_M-pyrifera_M_contig92085.21318.1 vs. uniprot
Match: A3JYS4_9RHOB (Transcriptional regulator, LacI family protein n=2 Tax=Sagittula TaxID=58842 RepID=A3JYS4_9RHOB)

HSP 1 Score: 256 bits (654), Expect = 2.810e-82
Identity = 127/183 (69.40%), Postives = 148/183 (80.87%), Query Frame = 0
Query:    1 YSWLDVNNRSAFSRATDFLLDLGHRRIALINGLEAMDFAYRRRDGYERTLRARGIEPDTDLMRSDEMTEVYGYRSAREMMAHGAPPTAYLVSSIICAFGVRRAVEEAGLRIGRDISIITFDDELSYLKNGEDVPIFTAARSSVRDAGRQAGEMLLQLIENPEKMPLNLLLEAELMVGTSTGPA 183
            YSWLD+NN  AF RAT+FLLDLGH+RIALINGLE MDFAYRRR GYE  L  RG+ PD  LMR++EMTEVYG+R+A EM+A   PPTA++VSS+I A GVRRA+ EAGL +GRDIS+IT DD+L YLKNG  VPIFTA RSSVR+AG +A EMLL  I NP   PL  L+EAEL++GTSTGPA
Sbjct:  157 YSWLDINNAGAFQRATEFLLDLGHQRIALINGLEFMDFAYRRRIGYETALTDRGMAPDPTLMRAEEMTEVYGFRTAAEMLADARPPTAFIVSSMITAIGVRRAIHEAGLEMGRDISVITHDDDLGYLKNGHSVPIFTATRSSVREAGERAAEMLLDQIRNPGGQPLTHLMEAELIIGTSTGPA 339          
BLAST of mRNA_M-pyrifera_M_contig92085.21318.1 vs. uniprot
Match: A0A222E5R1_9RHOB (HTH-type transcriptional regulator RafR n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E5R1_9RHOB)

HSP 1 Score: 255 bits (652), Expect = 4.690e-82
Identity = 129/183 (70.49%), Postives = 147/183 (80.33%), Query Frame = 0
Query:    1 YSWLDVNNRSAFSRATDFLLDLGHRRIALINGLEAMDFAYRRRDGYERTLRARGIEPDTDLMRSDEMTEVYGYRSAREMMAHGAPPTAYLVSSIICAFGVRRAVEEAGLRIGRDISIITFDDELSYLKNGEDVPIFTAARSSVRDAGRQAGEMLLQLIENPEKMPLNLLLEAELMVGTSTGPA 183
            YSWLD NN  AF RATDFLLDLGHRRIALINGLE MDFA+RRR+ Y   L  RGI  D  LMRSDEMTEV+GYRSAR+M+   APPTA+LVSS+I A GVRRA+ EAGL++GRD+S+IT DD+L YLKNG DVPIFTA RSSVR AG +A EMLL LI NP    L  L+EAEL++G+STGPA
Sbjct:  157 YSWLDTNNSRAFRRATDFLLDLGHRRIALINGLEFMDFAFRRRESYVSALTDRGIAADPTLMRSDEMTEVFGYRSARDMLRDSAPPTAFLVSSMITAIGVRRAIHEAGLQMGRDVSVITHDDDLGYLKNGHDVPIFTATRSSVRSAGAKAAEMLLHLIRNPGSPHLTQLMEAELIIGSSTGPA 339          
BLAST of mRNA_M-pyrifera_M_contig92085.21318.1 vs. uniprot
Match: M9R5P8_9RHOB (HTH-type transcriptional regulator n=1 Tax=Octadecabacter antarcticus 307 TaxID=391626 RepID=M9R5P8_9RHOB)

HSP 1 Score: 255 bits (652), Expect = 5.630e-82
Identity = 131/186 (70.43%), Postives = 147/186 (79.03%), Query Frame = 0
Query:    1 YSWLDVNNRSAFSRATDFLLDLGHRRIALINGLEAMDFAYRRRDGYERTLRARGIEPDTDLMRSDEMTEVYGYRSAREMMAHGAPPTAYLVSSIICAFGVRRAVEEAGLRIGRDISIITFDDELSYLKNGEDVPIFTAARSSVRDAGRQAGEMLLQLIENPEKMPLNLLLEAELMVGTSTGPAPQT 186
            YSWLDVNNRSAF RAT+FLLDLGH+RIALINGLE MDFA+RRR GYE  L AR + PD  L+RS+EMTE +GY SA E++    PPTA LVSSII A GVRRA++E GL++GRDISIIT+DD LSYL NG DVPIFTA RSSVRDAGR   EMLL  I NP+  P + LLE EL VG STGPAP T
Sbjct:  157 YSWLDVNNRSAFRRATEFLLDLGHKRIALINGLETMDFAHRRRSGYEDALSARDVAPDPTLLRSNEMTEAFGYASAVELLGQSRPPTALLVSSIISALGVRRALDERGLQMGRDISIITYDDGLSYLANGADVPIFTATRSSVRDAGRALSEMLLAQINNPDAPPQHRLLEVELTVGCSTGPAPAT 342          
BLAST of mRNA_M-pyrifera_M_contig92085.21318.1 vs. uniprot
Match: UPI0008FD04E3 (substrate-binding domain-containing protein n=2 Tax=Nioella TaxID=1775424 RepID=UPI0008FD04E3)

HSP 1 Score: 255 bits (651), Expect = 7.290e-82
Identity = 130/185 (70.27%), Postives = 151/185 (81.62%), Query Frame = 0
Query:    1 YSWLDVNNRSAFSRATDFLLDLGHRRIALINGLEAMDFAYRRRDGYERTLRARGIEPDTDLMRSDEMTEVYGYRSAREMMAHGAPPTAYLVSSIICAFGVRRAVEEAGLRIGRDISIITFDDELSYLKNGEDVPIFTAARSSVRDAGRQAGEMLLQLIENPEKMPLNLLLEAELMVGTSTGPAPQ 185
            YSW+DVNNR AFSRAT+ LLDLGHRRIAL+NGLE MDFA RRR GYE+ LR RG+  D  L  SDEMTE YGY +AR M+A   PPTA+LVSS+I A GVRRA+EEA L++GRD+S+IT DDELSYL NG+DVPIFTA RSSVR+AGR A   LL+LIE+P + P + LLEAELM+G STGPAPQ
Sbjct:  157 YSWVDVNNRRAFSRATELLLDLGHRRIALVNGLEDMDFAIRRRQGYEKALRERGLAADPALGASDEMTEHYGYDTARRMLAGHTPPTAFLVSSLISAIGVRRALEEADLKMGRDVSVITHDDELSYLGNGKDVPIFTATRSSVREAGRIAANTLLELIEDPARTPRHHLLEAELMLGRSTGPAPQ 341          
BLAST of mRNA_M-pyrifera_M_contig92085.21318.1 vs. uniprot
Match: A4EKS2_9RHOB (Transcriptional regulator, LacI family protein n=1 Tax=Roseobacter sp. CCS2 TaxID=391593 RepID=A4EKS2_9RHOB)

HSP 1 Score: 254 bits (650), Expect = 1.030e-81
Identity = 128/185 (69.19%), Postives = 148/185 (80.00%), Query Frame = 0
Query:    1 YSWLDVNNRSAFSRATDFLLDLGHRRIALINGLEAMDFAYRRRDGYERTLRARGIEPDTDLMRSDEMTEVYGYRSAREMMAHGAPPTAYLVSSIICAFGVRRAVEEAGLRIGRDISIITFDDELSYLKNGEDVPIFTAARSSVRDAGRQAGEMLLQLIENPEKMPLNLLLEAELMVGTSTGPAPQ 185
            Y+WLDVNNRSAF RA DFL DLGHRRIALINGLE MDFA+RRRDGY  +L++ GI+PD  LMRS EMTEV+GY+S R+M+     PTA L SS+I A GVRRA+EE GL +G+D+S+IT DD LSYL+NG DVPIFTA RSSVRDAGRQ  EMLL  I +P   P   LLEAELMVG+STGPAP+
Sbjct:  157 YAWLDVNNRSAFKRAADFLFDLGHRRIALINGLEVMDFAHRRRDGYTASLQSHGIDPDPALMRSGEMTEVFGYQSTRDMLKPDNAPTAILCSSLISALGVRRAIEEKGLTMGKDVSVITHDDALSYLQNGGDVPIFTATRSSVRDAGRQLAEMLLNAIADPHMTPQTQLLEAELMVGSSTGPAPR 341          
BLAST of mRNA_M-pyrifera_M_contig92085.21318.1 vs. uniprot
Match: A0A842I876_9RHOB (LacI family DNA-binding transcriptional regulator n=1 Tax=Gemmobacter straminiformis TaxID=2045119 RepID=A0A842I876_9RHOB)

HSP 1 Score: 254 bits (648), Expect = 2.070e-81
Identity = 128/184 (69.57%), Postives = 149/184 (80.98%), Query Frame = 0
Query:    1 YSWLDVNNRSAFSRATDFLLDLGHRRIALINGLEAMDFAYRRRDGYERTLRARGIEPDTDLMRSDEMTEVYGYRSAREMMAHGAPPTAYLVSSIICAFGVRRAVEEAGLRIGRDISIITFDDELSYLKNGEDVPIFTAARSSVRDAGRQAGEMLLQLIENPEKMPLNLLLEAELMVGTSTGPAP 184
            YSW+DVNNR AF RAT+FLLDLGHRRIAL+NGLE MDFA RRR G+   L ARG+ PD+ +M SDEMTEV GYR+A+ M+A  APPTA+L +S+I   GVRRAVEE GL IGRDISII  DD+LSY+KNGEDVPIFTA RSSVR+AGR A EMLL +I +P+  P   LLEAEL++G STGPAP
Sbjct:  157 YSWVDVNNRRAFQRATEFLLDLGHRRIALVNGLENMDFAIRRRTGFTDALLARGLAPDSAIMASDEMTEVSGYRAAKAMLAMDAPPTAFLAASMISGMGVRRAVEERGLAIGRDISIIIHDDDLSYMKNGEDVPIFTATRSSVREAGRLAAEMLLDIIAHPDHAPQQRLLEAELIIGQSTGPAP 340          
BLAST of mRNA_M-pyrifera_M_contig92085.21318.1 vs. uniprot
Match: UPI001BB92C6F (Substrate-binding domain-containing protein n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=UPI001BB92C6F)

HSP 1 Score: 253 bits (647), Expect = 2.850e-81
Identity = 126/185 (68.11%), Postives = 150/185 (81.08%), Query Frame = 0
Query:    1 YSWLDVNNRSAFSRATDFLLDLGHRRIALINGLEAMDFAYRRRDGYERTLRARGIEPDTDLMRSDEMTEVYGYRSAREMMAHGAPPTAYLVSSIICAFGVRRAVEEAGLRIGRDISIITFDDELSYLKNGEDVPIFTAARSSVRDAGRQAGEMLLQLIENPEKMPLNLLLEAELMVGTSTGPAPQ 185
            YSWLDVNNR AF RATD+LLDLGHRRIAL+NGLE MDFA RRR GY   L ARG++PDT LM SDEM+EV G+R+AR+M+A   PPTA+L +S+I   GVRRAVE AGL +GRD+S+I FDD+LSY+KNGE  PIFTA RSSVR+AG+   E+LL  I NP++ P   LLEAEL+VGTSTGPAP+
Sbjct:  157 YSWLDVNNRRAFLRATDYLLDLGHRRIALVNGLEFMDFAIRRRRGYVEALEARGLKPDTSLMSSDEMSEVAGFRAARQMLALPNPPTAFLAASMISGMGVRRAVEGAGLMLGRDVSLIVFDDDLSYMKNGEGTPIFTAMRSSVREAGKLVAELLLDRIANPDQPPAEQLLEAELVVGTSTGPAPE 341          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92085.21318.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2S8EYE0_9RHOB3.900e-8772.43LacI family transcriptional regulator n=1 Tax=Rhod... [more]
UPI000FDC9C725.190e-8772.28substrate-binding domain-containing protein n=1 Ta... [more]
A0A0P1G5Q6_9RHOB8.470e-8369.19Raffinose operon repressor n=1 Tax=Tropicibacter n... [more]
A3JYS4_9RHOB2.810e-8269.40Transcriptional regulator, LacI family protein n=2... [more]
A0A222E5R1_9RHOB4.690e-8270.49HTH-type transcriptional regulator RafR n=3 Tax=Ro... [more]
M9R5P8_9RHOB5.630e-8270.43HTH-type transcriptional regulator n=1 Tax=Octadec... [more]
UPI0008FD04E37.290e-8270.27substrate-binding domain-containing protein n=2 Ta... [more]
A4EKS2_9RHOB1.030e-8169.19Transcriptional regulator, LacI family protein n=1... [more]
A0A842I876_9RHOB2.070e-8169.57LacI family DNA-binding transcriptional regulator ... [more]
UPI001BB92C6F2.850e-8168.11Substrate-binding domain-containing protein n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2300coord: 1..179
e-value: 1.3E-35
score: 124.7
NoneNo IPR availablePFAMPF13377Peripla_BP_3coord: 16..180
e-value: 1.6E-26
score: 93.6
NoneNo IPR availablePANTHERPTHR30146LACI-RELATED TRANSCRIPTIONAL REPRESSORcoord: 3..186
NoneNo IPR availablePANTHERPTHR30146:SF109HTH-TYPE TRANSCRIPTIONAL REGULATOR EBGR-RELATEDcoord: 3..186
IPR028082Periplasmic binding protein-like ISUPERFAMILY53822Periplasmic binding protein-like Icoord: 4..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92085contigM-pyrifera_M_contig92085:5..568 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92085.21318.1mRNA_M-pyrifera_M_contig92085.21318.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig92085 5..568 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig92085.21318.1 ID=prot_M-pyrifera_M_contig92085.21318.1|Name=mRNA_M-pyrifera_M_contig92085.21318.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=188bp
YSWLDVNNRSAFSRATDFLLDLGHRRIALINGLEAMDFAYRRRDGYERTL
RARGIEPDTDLMRSDEMTEVYGYRSAREMMAHGAPPTAYLVSSIICAFGV
RRAVEEAGLRIGRDISIITFDDELSYLKNGEDVPIFTAARSSVRDAGRQA
GEMLLQLIENPEKMPLNLLLEAELMVGTSTGPAPQTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028082Peripla_BP_I