prot_M-pyrifera_M_contig91942.21288.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig91942.21288.1
Unique Nameprot_M-pyrifera_M_contig91942.21288.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length77
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91942.21288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013097Stress responsive alpha-beta barrelPFAMPF07876Dabbcoord: 4..75
e-value: 1.3E-8
score: 35.3
IPR013097Stress responsive alpha-beta barrelPROSITEPS51502S_R_A_B_BARRELcoord: 1..74
score: 13.905
NoneNo IPR availableGENE3D3.30.70.100coord: 1..75
e-value: 1.4E-10
score: 43.5
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 6..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91942contigM-pyrifera_M_contig91942:343..573 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91942.21288.1mRNA_M-pyrifera_M_contig91942.21288.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig91942 343..573 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig91942.21288.1 ID=prot_M-pyrifera_M_contig91942.21288.1|Name=mRNA_M-pyrifera_M_contig91942.21288.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=77bp
AVRKLGKLDCVEAMTCGRTFTERGNGYTVALCARLRSKADLPVYAKHLEH
VRVKEKYIIPILDEGEAKIIAMDYESP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013097Dabb
IPR011008Dimeric_a/b-barrel