prot_M-pyrifera_M_contig91878.21272.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig91878.21272.1
Unique Nameprot_M-pyrifera_M_contig91878.21272.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length124
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91878.21272.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 5..120
e-value: 9.3E-11
score: 43.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 26..117
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 29..96
score: 8.621

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91878contigM-pyrifera_M_contig91878:86..457 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91878.21272.1mRNA_M-pyrifera_M_contig91878.21272.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig91878 86..457 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig91878.21272.1 ID=prot_M-pyrifera_M_contig91878.21272.1|Name=mRNA_M-pyrifera_M_contig91878.21272.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=124bp
VDVVEEGVEAQKALVELERKRGVEGKAMAEHIFRLACLYESLGRRAESVA
ANDNALVHFPKHPGALTNRANTLYRKGDAAGAMRVYAEVAEGDVATPAQR
AVARSNLATIADQVGDFGVSMSIV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom