prot_M-pyrifera_M_contig91712.21248.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig91712.21248.1
Unique Nameprot_M-pyrifera_M_contig91712.21248.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length168
Homology
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BLAST of mRNA_M-pyrifera_M_contig91712.21248.1 vs. uniprot
Match: A0A061RXE6_9CHLO (Plexin A n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RXE6_9CHLO)

HSP 1 Score: 63.2 bits (152), Expect = 1.510e-8
Identity = 47/127 (37.01%), Postives = 66/127 (51.97%), Query Frame = 0 
Query:   35 VGGRMCGNPVIRDSMKLLSCIAPAGVGKHVDV-VVSWRNNNFLSIANLSILST--SYRSPQLQSISPPFGIPVLGNESTLLLSGSEFGPASLEAPLQVLVDGMECGEVKRLSDQLVQCSRVPMGVGV 158
            VGGR CG      +  L  C+ P GVG+ +DV VV++ +    + +  S  +T  SY  P L+SI+P  G    G   TL  +GS FGP++LE P +V      C   +RLSD  + C+  P   GV
Sbjct:  158 VGGRSCGALQCLAAGSL-ECVLPGGVGRALDVSVVTFYDAGGANTSTGSRPNTLFSYEDPALESIAPMQGRSTGGTHVTL--TGSNFGPSTLELPPKVYFGNSTCLRPERLSDSTIVCATPPHSEGV 281
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BLAST of mRNA_M-pyrifera_M_contig91712.21248.1 vs. uniprot
Match: A0A061SK47_9CHLO (Plexin A n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SK47_9CHLO)

HSP 1 Score: 63.2 bits (152), Expect = 1.580e-8
Identity = 47/127 (37.01%), Postives = 66/127 (51.97%), Query Frame = 0 
Query:   35 VGGRMCGNPVIRDSMKLLSCIAPAGVGKHVDV-VVSWRNNNFLSIANLSILST--SYRSPQLQSISPPFGIPVLGNESTLLLSGSEFGPASLEAPLQVLVDGMECGEVKRLSDQLVQCSRVPMGVGV 158
            VGGR CG      +  L  C+ P GVG+ +DV VV++ +    + +  S  +T  SY  P L+SI+P  G    G   TL  +GS FGP++LE P +V      C   +RLSD  + C+  P   GV
Sbjct:  158 VGGRSCGALQCLAAGSL-ECVLPGGVGRALDVSVVTFYDAGGANTSTGSRPNTLFSYEDPALESIAPMQGRSTGGTHVTL--TGSNFGPSTLELPPKVYFGNSTCLRPERLSDSTIVCATPPHSEGV 281
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91712.21248.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A061RXE6_9CHLO1.510e-837.01Plexin A n=1 Tax=Tetraselmis sp. GSL018 TaxID=5827... [more]
A0A061SK47_9CHLO1.580e-837.01Plexin A n=1 Tax=Tetraselmis sp. GSL018 TaxID=5827... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 89..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91712contigM-pyrifera_M_contig91712:17..520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91712.21248.1mRNA_M-pyrifera_M_contig91712.21248.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig91712 17..520 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig91712.21248.1 ID=prot_M-pyrifera_M_contig91712.21248.1|Name=mRNA_M-pyrifera_M_contig91712.21248.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp
MVVSTPLAAGGGSELRISADMSIVAAAGGVERVEVGGRMCGNPVIRDSMK
LLSCIAPAGVGKHVDVVVSWRNNNFLSIANLSILSTSYRSPQLQSISPPF
GIPVLGNESTLLLSGSEFGPASLEAPLQVLVDGMECGEVKRLSDQLVQCS
RVPMGVGVKRSVVVVSGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014756Ig_E-set