prot_M-pyrifera_M_contig91710.21247.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig91710.21247.1
Unique Nameprot_M-pyrifera_M_contig91710.21247.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length246
Homology
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BLAST of mRNA_M-pyrifera_M_contig91710.21247.1 vs. uniprot
Match: A0A7C7V0G3_9PLAN (Tetratricopeptide repeat protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7C7V0G3_9PLAN)

HSP 1 Score: 65.5 bits (158), Expect = 1.040e-8
Identity = 38/121 (31.40%), Postives = 66/121 (54.55%), Query Frame = 0 
Query:   17 NVSTARQERADEAIAEFERRRDKAQFTAALARWKEGDLPECRVTLDEIIKRNPDHTGARLLLADLLLVEKQPQLAIPHVQSVLEREPENPVALHTSGLVHEALGNTAASLEQYKRATELAP 137
            +++  R+ R + A   FE+ R  A++  A  +W+EGD   C   L+ +++RNPD+  AR+LLA++LL + QP+ A   +   +    ++P   +T  L  E LG+   +   Y+RA    P
Sbjct:   51 DLAEPRRARHEAAATTFEQSRAGAEYREAEQQWEEGDAAGCIQRLERLLERNPDYWEARVLLAEVLLTQDQPERARQWLLPAIRDHSDHPRLHYTMALALEKLGHAEEANAFYRRAMAALP 171
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BLAST of mRNA_M-pyrifera_M_contig91710.21247.1 vs. uniprot
Match: A0A7C4R0Q9_9DELT (Tetratricopeptide repeat protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A7C4R0Q9_9DELT)

HSP 1 Score: 55.8 bits (133), Expect = 2.430e-5
Identity = 31/94 (32.98%), Postives = 50/94 (53.19%), Query Frame = 0 
Query:   45 ALARWKEGDLPECRVTLDEIIKRNPDHTGARLLLADLLLVEKQPQLAIPHVQSVLEREPENPVALHTSGLVHEALGNTAASLEQYKRATELAPE 138
            A  R+  G+      T  + ++R P +  AR  LA  L  + Q + A+ H+ S+LER+ +NP AL+  G +    G+ A +LE + RA   AP+
Sbjct:  494 AALRYAAGEYAAAAATWGQALERYPGYPEARYRLALALFRDGQSRKALEHLDSLLERDAQNPYALNLRGKIRFETGDPAGALEDWARALAAAPD 587
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91710.21247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7C7V0G3_9PLAN1.040e-831.40Tetratricopeptide repeat protein n=1 Tax=Planctomy... [more]
A0A7C4R0Q9_9DELT2.430e-532.98Tetratricopeptide repeat protein n=1 Tax=Desulfoba... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 72..105
e-value: 22.0
score: 12.0
coord: 189..222
e-value: 420.0
score: 0.7
coord: 38..71
e-value: 120.0
score: 5.5
coord: 106..139
e-value: 0.26
score: 20.4
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 106..139
score: 8.939
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 72..105
score: 5.723
NoneNo IPR availablePFAMPF13432TPR_16coord: 76..139
e-value: 5.8E-5
score: 23.7
NoneNo IPR availablePANTHERPTHR45586:SF1coord: 24..138
NoneNo IPR availablePANTHERPTHR45586FAMILY NOT NAMEDcoord: 24..138
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 18..246
e-value: 8.5E-21
score: 76.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 23..245
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 38..139
score: 15.829

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91710contigM-pyrifera_M_contig91710:37..774 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91710.21247.1mRNA_M-pyrifera_M_contig91710.21247.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig91710 37..774 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig91710.21247.1 ID=prot_M-pyrifera_M_contig91710.21247.1|Name=mRNA_M-pyrifera_M_contig91710.21247.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=246bp
MGCASNPLKKLVAPIANVSTARQERADEAIAEFERRRDKAQFTAALARWK
EGDLPECRVTLDEIIKRNPDHTGARLLLADLLLVEKQPQLAIPHVQSVLE
REPENPVALHTSGLVHEALGNTAASLEQYKRATELAPENEVFLLSYDVAV
GRPAQPSEVTQATGQVAVEEMSSPLSIESTSRAANREPWRVLLDEAEFAL
KRGDDYATRAAFDRAMRYSGDDPQIPISIGVLILRHNRPELAQEYL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom