prot_M-pyrifera_M_contig91703.21244.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig91703.21244.1
Unique Nameprot_M-pyrifera_M_contig91703.21244.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length249
Homology
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BLAST of mRNA_M-pyrifera_M_contig91703.21244.1 vs. uniprot
Match: UPI001C68C35D (hypothetical protein n=1 Tax=Cylindrospermopsis raciborskii TaxID=77022 RepID=UPI001C68C35D)

HSP 1 Score: 54.3 bits (129), Expect = 4.090e-6
Identity = 31/43 (72.09%), Postives = 33/43 (76.74%), Query Frame = 0 
Query:    4 VSSDLASGVVSISSTFYAFAALKEDGSVITWGSSSYGGDSSLV 46
            +SS L SGV  I ST YAFAALK DGSV+TWGSS YG DSS V
Sbjct:    1 MSSRLTSGVTQIFSTGYAFAALKSDGSVVTWGSSFYGEDSSSV 43
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BLAST of mRNA_M-pyrifera_M_contig91703.21244.1 vs. uniprot
Match: A0A838WR53_9CYAN (Uncharacterized protein (Fragment) n=5 Tax=Cylindrospermopsis raciborskii TaxID=77022 RepID=A0A838WR53_9CYAN)

HSP 1 Score: 53.5 bits (127), Expect = 5.750e-6
Identity = 30/43 (69.77%), Postives = 32/43 (74.42%), Query Frame = 0 
Query:    4 VSSDLASGVVSISSTFYAFAALKEDGSVITWGSSSYGGDSSLV 46
            +SS L SGV  I S  YAFAALK DGSV+TWG SS GGDSS V
Sbjct:    1 MSSRLTSGVTQIFSNVYAFAALKSDGSVVTWGESSNGGDSSSV 43
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BLAST of mRNA_M-pyrifera_M_contig91703.21244.1 vs. uniprot
Match: UPI0015E0FBA8 (hypothetical protein n=1 Tax=Cylindrospermopsis raciborskii TaxID=77022 RepID=UPI0015E0FBA8)

HSP 1 Score: 57.8 bits (138), Expect = 6.730e-6
Identity = 31/43 (72.09%), Postives = 34/43 (79.07%), Query Frame = 0 
Query:    4 VSSDLASGVVSISSTFYAFAALKEDGSVITWGSSSYGGDSSLV 46
            +SS L SGV  I STF AFAALK DGSV+TWG S+YGGDSS V
Sbjct:    1 MSSSLTSGVTQIFSTFSAFAALKSDGSVVTWGDSNYGGDSSSV 43
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BLAST of mRNA_M-pyrifera_M_contig91703.21244.1 vs. uniprot
Match: A0A562IZM9_9GAMM (Alpha-tubulin suppressor-like RCC1 family protein n=1 Tax=Azomonas agilis TaxID=116849 RepID=A0A562IZM9_9GAMM)

HSP 1 Score: 54.7 bits (130), Expect = 7.190e-5
Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 0 
Query:    4 VSSDLASGVVSISSTFYAFAALKEDGSVITWGSSSYGGDSS 44
            +SS L+SGVV I ST  AFAALK DGSV+TWG ++YGGDSS
Sbjct: 1180 ISSKLSSGVVQIFSTSSAFAALKTDGSVVTWGDATYGGDSS 1220
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91703.21244.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
UPI001C68C35D4.090e-672.09hypothetical protein n=1 Tax=Cylindrospermopsis ra... [more]
A0A838WR53_9CYAN5.750e-669.77Uncharacterized protein (Fragment) n=5 Tax=Cylindr... [more]
UPI0015E0FBA86.730e-672.09hypothetical protein n=1 Tax=Cylindrospermopsis ra... [more]
A0A562IZM9_9GAMM7.190e-570.73Alpha-tubulin suppressor-like RCC1 family protein ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 171..249
e-value: 3.3E-9
score: 38.2
coord: 1..170
e-value: 4.3E-28
score: 100.1
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 8..248
NoneNo IPR availablePANTHERPTHR34720FAMILY NOT NAMEDcoord: 14..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91703contigM-pyrifera_M_contig91703:6..752 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91703.21244.1mRNA_M-pyrifera_M_contig91703.21244.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig91703 6..752 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig91703.21244.1 ID=prot_M-pyrifera_M_contig91703.21244.1|Name=mRNA_M-pyrifera_M_contig91703.21244.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=249bp
AAGVSSDLASGVVSISSTFYAFAALKEDGSVITWGSSSYGGDSSLVSSKL
SSGVDQVYSNKGAFAAVKNDGSVVAWGASTYGGDISVVNAKVASDVSRIF
STLSAFAALKTDGSVVTWGNADNGGSSASVVNFISSGIVQISSTDRLFIA
TNAIGNVTLWGGKEFDESPAFMRSVLTDNGFTQIAWSDGAHAIITLDGAC
VAWGSDDYGGNPRFVGSYLRFGVVQIASTSSGFVALLFDGSVVTWGGDT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II