prot_M-pyrifera_M_contig91628.21231.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig91628.21231.1
Unique Nameprot_M-pyrifera_M_contig91628.21231.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length35
Homology
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BLAST of mRNA_M-pyrifera_M_contig91628.21231.1 vs. uniprot
Match: E0XV40_9GAMM (Uncharacterized protein n=1 Tax=uncultured Chromatiales bacterium HF0200_41F04 TaxID=710740 RepID=E0XV40_9GAMM)

HSP 1 Score: 54.3 bits (129), Expect = 6.100e-9
Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 0 
Query:    1 TSLPGDHSEREPPESISNSEVKLLSADDSVGDPM 34
            TSLPGD+SER PP+ ISNSEVK LSADDSVG PM
Sbjct:   24 TSLPGDYSERVPPDPISNSEVKPLSADDSVGGPM 57
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91628.21231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
E0XV40_9GAMM6.100e-982.35Uncharacterized protein n=1 Tax=uncultured Chromat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91628contigM-pyrifera_M_contig91628:323..427 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91628.21231.1mRNA_M-pyrifera_M_contig91628.21231.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig91628 323..427 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig91628.21231.1 ID=prot_M-pyrifera_M_contig91628.21231.1|Name=mRNA_M-pyrifera_M_contig91628.21231.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=35bp
TSLPGDHSEREPPESISNSEVKLLSADDSVGDPM*
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