prot_M-pyrifera_M_contig91553.21215.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig91553.21215.1
Unique Nameprot_M-pyrifera_M_contig91553.21215.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length110
Homology
BLAST of mRNA_M-pyrifera_M_contig91553.21215.1 vs. uniprot
Match: UPI001EB047B9 (uncharacterized protein LOC124142196 n=7 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB047B9)

HSP 1 Score: 55.5 bits (132), Expect = 1.380e-6
Identity = 22/48 (45.83%), Postives = 29/48 (60.42%), Query Frame = 0
Query:    1 CEACGKEFKSSGGLRLHMRSKHEGIRYSCPDCSKTFSSPSSLHRHKAV 48
            C  CGK F     L  HMRS H+G RY+C  C+K+F+S   L++HK  
Sbjct:   45 CPQCGKGFNRKDNLSRHMRSVHQGERYACDHCTKSFASNQKLNKHKCA 92          
BLAST of mRNA_M-pyrifera_M_contig91553.21215.1 vs. uniprot
Match: A0A8D9EXC3_9HEMI (Zinc finger protein 2 (Fragment) n=2 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D9EXC3_9HEMI)

HSP 1 Score: 52.4 bits (124), Expect = 4.010e-6
Identity = 22/42 (52.38%), Postives = 26/42 (61.90%), Query Frame = 0
Query:    4 CGKEFKSSGGLRLHMRSKHEGIRYSCPDCSKTFSSPSSLHRH 45
            C K F   G L  H+RS HEGI+Y C  CSK+F   S+L RH
Sbjct:    2 CPKSFSRKGELNKHVRSTHEGIKYPCSKCSKSFLDRSNLRRH 43          
BLAST of mRNA_M-pyrifera_M_contig91553.21215.1 vs. uniprot
Match: UPI001E671E6F (uncharacterized protein LOC123772695 isoform X1 n=2 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E671E6F)

HSP 1 Score: 52.4 bits (124), Expect = 1.650e-5
Identity = 19/48 (39.58%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    1 CEACGKEFKSSGGLRLHMRSKHEGIRYSCPDCSKTFSSPSSLHRHKAV 48
            C+ C K+ K+   L+LHM++KHEG ++ C +C+++F    S  +HKA+
Sbjct:  717 CKVCEKDCKTPYYLQLHMKTKHEGAKFLCLECNRSFKWKQSYRKHKAI 764          
BLAST of mRNA_M-pyrifera_M_contig91553.21215.1 vs. uniprot
Match: A0A8D8WTS2_9HEMI (Transcription factor hamlet (Fragment) n=6 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8WTS2_9HEMI)

HSP 1 Score: 51.2 bits (121), Expect = 1.790e-5
Identity = 22/45 (48.89%), Postives = 25/45 (55.56%), Query Frame = 0
Query:    1 CEACGKEFKSSGGLRLHMRSKHEGIRYSCPDCSKTFSSPSSLHRH 45
            C  C K F     L  H+RS HEGIR+ C  CSKTFS    L +H
Sbjct:   90 CTQCPKTFLKKRNLNTHLRSFHEGIRHPCEICSKTFSCKGGLRKH 134          
BLAST of mRNA_M-pyrifera_M_contig91553.21215.1 vs. uniprot
Match: U4TTD6_DENPD (Uncharacterized protein (Fragment) n=1 Tax=Dendroctonus ponderosae TaxID=77166 RepID=U4TTD6_DENPD)

HSP 1 Score: 50.8 bits (120), Expect = 5.240e-5
Identity = 25/49 (51.02%), Postives = 32/49 (65.31%), Query Frame = 0
Query:    1 CEACGKEFKSSGGLRLHMRSKHEGIR-YSCPDCSKTFSSPSSLHRHKAV 48
            C  CGK +K+S  L LHMRS H G R   C  CS+TF+ PSSL +H+ +
Sbjct:  364 CNLCGKRYKNSKILLLHMRS-HTGERPLKCEICSRTFALPSSLQKHRRI 411          
BLAST of mRNA_M-pyrifera_M_contig91553.21215.1 vs. uniprot
Match: N6U244_DENPD (Uncharacterized protein (Fragment) n=1 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6U244_DENPD)

HSP 1 Score: 50.8 bits (120), Expect = 5.400e-5
Identity = 25/49 (51.02%), Postives = 32/49 (65.31%), Query Frame = 0
Query:    1 CEACGKEFKSSGGLRLHMRSKHEGIR-YSCPDCSKTFSSPSSLHRHKAV 48
            C  CGK +K+S  L LHMRS H G R   C  CS+TF+ PSSL +H+ +
Sbjct:  368 CNLCGKRYKNSKILLLHMRS-HTGERPLKCEICSRTFALPSSLQKHRRI 415          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91553.21215.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
UPI001EB047B91.380e-645.83uncharacterized protein LOC124142196 n=7 Tax=Halio... [more]
A0A8D9EXC3_9HEMI4.010e-652.38Zinc finger protein 2 (Fragment) n=2 Tax=Cacopsyll... [more]
UPI001E671E6F1.650e-539.58uncharacterized protein LOC123772695 isoform X1 n=... [more]
A0A8D8WTS2_9HEMI1.790e-548.89Transcription factor hamlet (Fragment) n=6 Tax=Cac... [more]
U4TTD6_DENPD5.240e-551.02Uncharacterized protein (Fragment) n=1 Tax=Dendroc... [more]
N6U244_DENPD5.400e-551.02Uncharacterized protein (Fragment) n=1 Tax=Dendroc... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 54..77
e-value: 0.013
score: 24.7
coord: 1..22
e-value: 1.6
score: 17.8
coord: 82..105
e-value: 0.0016
score: 27.7
coord: 27..49
e-value: 3.1E-4
score: 30.1
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 27..49
e-value: 2.7E-6
score: 27.5
coord: 82..105
e-value: 1.1E-6
score: 28.8
coord: 54..77
e-value: 8.2E-5
score: 22.8
coord: 1..22
e-value: 2.1E-4
score: 21.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 29..49
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 84..105
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 56..77
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 1..27
score: 11.946
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 82..109
score: 13.796
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 27..54
score: 13.214
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 54..82
score: 12.84
NoneNo IPR availableGENE3D3.30.160.60coord: 26..53
e-value: 2.5E-8
score: 35.4
NoneNo IPR availableGENE3D3.30.160.60coord: 81..108
e-value: 2.0E-8
score: 35.9
NoneNo IPR availableGENE3D3.30.160.60coord: 1..23
e-value: 1.8E-5
score: 26.7
NoneNo IPR availableGENE3D3.30.160.60coord: 54..80
e-value: 6.2E-6
score: 27.9
NoneNo IPR availablePANTHERPTHR24390:SF67GH23506P-RELATEDcoord: 42..107
coord: 1..74
NoneNo IPR availablePANTHERPTHR24390FAMILY NOT NAMEDcoord: 42..107
coord: 1..74
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 1..49
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 54..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91553contigM-pyrifera_M_contig91553:8..337 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91553.21215.1mRNA_M-pyrifera_M_contig91553.21215.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig91553 8..337 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig91553.21215.1 ID=prot_M-pyrifera_M_contig91553.21215.1|Name=mRNA_M-pyrifera_M_contig91553.21215.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=110bp
CEACGKEFKSSGGLRLHMRSKHEGIRYSCPDCSKTFSSPSSLHRHKAVHS
GVNHACEECGKKYSRRSGLLLHQRSAHLGLRYSCPDCSKTFTRKSSLTSH
KKKFHAGVE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf