prot_M-pyrifera_M_contig91543.21214.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig91543.21214.1
Unique Nameprot_M-pyrifera_M_contig91543.21214.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length127
Homology
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BLAST of mRNA_M-pyrifera_M_contig91543.21214.1 vs. uniprot
Match: A0A0P1GAU3_9RHOB (Beta-glucanase n=2 Tax=Thalassobius autumnalis TaxID=2072972 RepID=A0A0P1GAU3_9RHOB)

HSP 1 Score: 50.8 bits (120), Expect = 8.150e-5
Identity = 26/79 (32.91%), Postives = 41/79 (51.90%), Query Frame = 0 
Query:   19 NEMDICLKGAENEGETGSFHAATWINGTEDFADVPLDFSPAKELAEFKMHWYADRIDWFVNGKMLHQVTKQ-DAIPWEP 96
            +E+DI   G +    T   H + W++G  +   VPL F  A     +   W+ DR+ WFV G+++H+V  +  AIP  P
Sbjct:  190 DEIDIEFLGRD----TRKLHLSWWVDGVLNSHVVPLGFDAADGPRLYAFEWHPDRLRWFVEGRLVHEVRAETSAIPAVP 264
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91543.21214.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0P1GAU3_9RHOB8.150e-532.91Beta-glucanase n=2 Tax=Thalassobius autumnalis Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.200coord: 3..103
e-value: 2.7E-12
score: 48.6
IPR000757Glycoside hydrolase family 16PFAMPF00722Glyco_hydro_16coord: 5..100
e-value: 5.0E-10
score: 39.1
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 10..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91543contigM-pyrifera_M_contig91543:334..714 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91543.21214.1mRNA_M-pyrifera_M_contig91543.21214.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig91543 334..714 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig91543.21214.1 ID=prot_M-pyrifera_M_contig91543.21214.1|Name=mRNA_M-pyrifera_M_contig91543.21214.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp
PPGNAFVCISTYIHDPVWNEMDICLKGAENEGETGSFHAATWINGTEDFA
DVPLDFSPAKELAEFKMHWYADRIDWFVNGKMLHQVTKQDAIPWEPMTVR
IIQRPISLPYEGESHLAIEEISYTPN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000757GH16
IPR013320ConA-like_dom_sf