prot_M-pyrifera_M_contig91508.21203.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig91508.21203.1
Unique Name	prot_M-pyrifera_M_contig91508.21203.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	94

Homology

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BLAST of mRNA_M-pyrifera_M_contig91508.21203.1 vs. uniprot
Match: A0A359EMB3_9GAMM (TonB_dep_Rec domain-containing protein (Fragment) n=1 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A359EMB3_9GAMM)

HSP 1 Score: 198 bits (504), Expect = 2.400e-58
Identity = 91/93 (97.85%), Postives = 91/93 (97.85%), Query Frame = 0

Query:    1 LGYEKYGLDLRLAMSYRDRYLDEIVEEGLDRYTDAHNQWDLTAKYRFGDNWMMYAEVINLNDEPAYYYAGSKSRPLQYDEFGRTAVVGVQYLY 93
            LGYEKYGLDLRLAMSYRDRYLDEIVEEGLDRYTDAHNQWD TAKYRFGDNWMMYAEVINLNDEPAYYYAGSKSRPLQYDEFGRT VVGVQYLY
Sbjct:  580 LGYEKYGLDLRLAMSYRDRYLDEIVEEGLDRYTDAHNQWDFTAKYRFGDNWMMYAEVINLNDEPAYYYAGSKSRPLQYDEFGRTTVVGVQYLY 672

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BLAST of mRNA_M-pyrifera_M_contig91508.21203.1 vs. uniprot
Match: A0A3C1KNX1_9GAMM (TonB-dependent receptor n=7 Tax=Halieaceae TaxID=1706372 RepID=A0A3C1KNX1_9GAMM)

HSP 1 Score: 198 bits (504), Expect = 2.860e-57
Identity = 91/93 (97.85%), Postives = 91/93 (97.85%), Query Frame = 0

Query:    1 LGYEKYGLDLRLAMSYRDRYLDEIVEEGLDRYTDAHNQWDLTAKYRFGDNWMMYAEVINLNDEPAYYYAGSKSRPLQYDEFGRTAVVGVQYLY 93
            LGYEKYGLDLRLAMSYRDRYLDEIVEEGLDRYTDAHNQWD TAKYRFGDNWMMYAEVINLNDEPAYYYAGSKSRPLQYDEFGRT VVGVQYLY
Sbjct:  861 LGYEKYGLDLRLAMSYRDRYLDEIVEEGLDRYTDAHNQWDFTAKYRFGDNWMMYAEVINLNDEPAYYYAGSKSRPLQYDEFGRTTVVGVQYLY 953

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BLAST of mRNA_M-pyrifera_M_contig91508.21203.1 vs. uniprot
Match: A0A2N5Y187_9GAMM (TonB-dependent receptor n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y187_9GAMM)

HSP 1 Score: 173 bits (439), Expect = 2.380e-48
Identity = 77/93 (82.80%), Postives = 85/93 (91.40%), Query Frame = 0

Query:    1 LGYEKYGLDLRLAMSYRDRYLDEIVEEGLDRYTDAHNQWDLTAKYRFGDNWMMYAEVINLNDEPAYYYAGSKSRPLQYDEFGRTAVVGVQYLY 93
            LGYEKYGLDLRLAMSYRDRYLDE+V+E LDRYTD+H QWDLTAKY   DNWM+YAE+INLNDEP YYYAG+KSR LQYDEFGRT VVG+QY+Y
Sbjct:  866 LGYEKYGLDLRLAMSYRDRYLDEVVDENLDRYTDSHMQWDLTAKYHVNDNWMVYAELINLNDEPEYYYAGNKSRVLQYDEFGRTTVVGLQYVY 958

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BLAST of mRNA_M-pyrifera_M_contig91508.21203.1 vs. uniprot
Match: UPI001300A412 (TonB-dependent receptor n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI001300A412)

HSP 1 Score: 160 bits (406), Expect = 7.120e-44
Identity = 70/93 (75.27%), Postives = 78/93 (83.87%), Query Frame = 0

Query:    1 LGYEKYGLDLRLAMSYRDRYLDEIVEEGLDRYTDAHNQWDLTAKYRFGDNWMMYAEVINLNDEPAYYYAGSKSRPLQYDEFGRTAVVGVQYLY 93
            LGYEKYGLDLRLAM YRD YLDE+V+EGLDR TDAH QWD TAKY   DNWM+YAE+ NLNDEP YYYAG+  R LQYDE+G T V+GVQY+Y
Sbjct:  854 LGYEKYGLDLRLAMKYRDSYLDELVDEGLDRTTDAHTQWDFTAKYSVNDNWMVYAEISNLNDEPEYYYAGNSQRVLQYDEYGTTTVIGVQYIY 946

[Close]

BLAST of mRNA_M-pyrifera_M_contig91508.21203.1 vs. uniprot
Match: A0A3L7DVZ6_9GAMM (TonB-dependent receptor n=1 Tax=Seongchinamella sediminis TaxID=2283635 RepID=A0A3L7DVZ6_9GAMM)

HSP 1 Score: 160 bits (404), Expect = 1.330e-43
Identity = 70/93 (75.27%), Postives = 78/93 (83.87%), Query Frame = 0

Query:    1 LGYEKYGLDLRLAMSYRDRYLDEIVEEGLDRYTDAHNQWDLTAKYRFGDNWMMYAEVINLNDEPAYYYAGSKSRPLQYDEFGRTAVVGVQYLY 93
            +GYEKYGLDLRLAM YRD YLDE+VEEGLDR TD H QWD TAKY   DNWM+YAEV NLNDEP YYYAG+  R LQYDE+G T+V+GVQY+Y
Sbjct:  854 IGYEKYGLDLRLAMKYRDSYLDEVVEEGLDRITDEHTQWDFTAKYSVSDNWMVYAEVSNLNDEPEYYYAGNSRRLLQYDEYGTTSVIGVQYIY 946

[Close]

BLAST of mRNA_M-pyrifera_M_contig91508.21203.1 vs. uniprot
Match: A0A356VKX3_9GAMM (TonB-dependent receptor n=4 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A356VKX3_9GAMM)

HSP 1 Score: 157 bits (398), Expect = 8.480e-43
Identity = 69/93 (74.19%), Postives = 78/93 (83.87%), Query Frame = 0

Query:    1 LGYEKYGLDLRLAMSYRDRYLDEIVEEGLDRYTDAHNQWDLTAKYRFGDNWMMYAEVINLNDEPAYYYAGSKSRPLQYDEFGRTAVVGVQYLY 93
            +GYEKYGLDLRLAMSYRD YLDE+V+EGLDR TD   QWD TAKY   DNW++YAE+ NLNDEP YYYAGS SR LQYDE+G T V+GVQY+Y
Sbjct:  830 IGYEKYGLDLRLAMSYRDSYLDELVDEGLDRITDERTQWDFTAKYSVTDNWLVYAEISNLNDEPEYYYAGSSSRVLQYDEYGTTTVIGVQYIY 922

[Close]

BLAST of mRNA_M-pyrifera_M_contig91508.21203.1 vs. uniprot
Match: A0A2D5FGD4_9GAMM (TonB-dependent receptor n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D5FGD4_9GAMM)

HSP 1 Score: 155 bits (392), Expect = 5.600e-42
Identity = 68/93 (73.12%), Postives = 76/93 (81.72%), Query Frame = 0

Query:    1 LGYEKYGLDLRLAMSYRDRYLDEIVEEGLDRYTDAHNQWDLTAKYRFGDNWMMYAEVINLNDEPAYYYAGSKSRPLQYDEFGRTAVVGVQYLY 93
            LGYEKYGLDLRLAMSYRD YLDE+VE G DRY  +H QWDLT KY   D WM+Y E+INLNDEPA+YYAG+  R LQYDEFGRT V G+QY+Y
Sbjct:  855 LGYEKYGLDLRLAMSYRDEYLDEVVEAGYDRYEASHTQWDLTGKYHINDQWMVYGEIINLNDEPAHYYAGNSRRLLQYDEFGRTMVFGLQYVY 947

[Close]

BLAST of mRNA_M-pyrifera_M_contig91508.21203.1 vs. uniprot
Match: UPI0019D3D858 (TonB-dependent receptor n=2 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D3D858)

HSP 1 Score: 151 bits (382), Expect = 1.260e-40
Identity = 68/93 (73.12%), Postives = 76/93 (81.72%), Query Frame = 0

Query:    1 LGYEKYGLDLRLAMSYRDRYLDEIVEEGLDRYTDAHNQWDLTAKYRFGDNWMMYAEVINLNDEPAYYYAGSKSRPLQYDEFGRTAVVGVQYLY 93
            LGYEKYG DLRLAM YRD Y+DE+VEEGLDR TDAH QWDLTAKY   + WM+YAEV NLN EP YYYAG  SR LQYDE+G T V+GVQ++Y
Sbjct:  867 LGYEKYGFDLRLAMKYRDSYIDELVEEGLDRTTDAHMQWDLTAKYFVSERWMVYAEVSNLNGEPEYYYAGKDSRLLQYDEYGTTTVLGVQFIY 959

[Close]

BLAST of mRNA_M-pyrifera_M_contig91508.21203.1 vs. uniprot
Match: A0A6C0TWW8_9GAMM (TonB-dependent receptor n=1 Tax=Kineobactrum salinum TaxID=2708301 RepID=A0A6C0TWW8_9GAMM)

HSP 1 Score: 150 bits (380), Expect = 2.350e-40
Identity = 64/93 (68.82%), Postives = 78/93 (83.87%), Query Frame = 0

Query:    1 LGYEKYGLDLRLAMSYRDRYLDEIVEEGLDRYTDAHNQWDLTAKYRFGDNWMMYAEVINLNDEPAYYYAGSKSRPLQYDEFGRTAVVGVQYLY 93
            +GY+KY LDLR A+ YRD YLDE+V++GLDRYTD H Q D TAKY   DNWM+YAE +NLNDEPA+YYAG+K R LQYDEFGRT V+G+Q++Y
Sbjct:  864 VGYDKYNLDLRFAVKYRDSYLDELVDDGLDRYTDEHMQIDFTAKYHVSDNWMLYAEFVNLNDEPAFYYAGNKRRVLQYDEFGRTTVIGLQFVY 956

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BLAST of mRNA_M-pyrifera_M_contig91508.21203.1 vs. uniprot
Match: A0A6L8BGX2_9PROT (TonB-dependent receptor n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6L8BGX2_9PROT)

HSP 1 Score: 137 bits (346), Expect = 9.160e-36
Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 0

Query:    1 LGYEKYGLDLRLAMSYRDRYLDEIVEEGLDRYTDAHNQWDLTAKYRFGDNWMMYAEVINLNDEPAYYYAGSKSRPLQYDEFGRTAVVGVQY 91
            LGY+KYGLD+RLA+ YRD Y+DE+VE GLDRYTD   QWDLTAKY   +NW +YAE  NL D P +YYAGS+ R LQYDEFG T+ +G QY
Sbjct:  862 LGYDKYGLDIRLAVKYRDSYIDELVEPGLDRYTDDRLQWDLTAKYGLSENWQVYAEFANLGDAPEFYYAGSRRRVLQYDEFGTTSSMGFQY 952

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig91508.21203.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig91508.21203.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A359EMB3_9GAMM	2.400e-58	97.85	TonB_dep_Rec domain-containing protein (Fragment) ...	[more]
A0A3C1KNX1_9GAMM	2.860e-57	97.85	TonB-dependent receptor n=7 Tax=Halieaceae TaxID=1...	[more]
A0A2N5Y187_9GAMM	2.380e-48	82.80	TonB-dependent receptor n=1 Tax=Kineobactrum sedim...	[more]
UPI001300A412	7.120e-44	75.27	TonB-dependent receptor n=1 Tax=Parahaliea mediter...	[more]
A0A3L7DVZ6_9GAMM	1.330e-43	75.27	TonB-dependent receptor n=1 Tax=Seongchinamella se...	[more]
A0A356VKX3_9GAMM	8.480e-43	74.19	TonB-dependent receptor n=4 Tax=Halieaceae bacteri...	[more]
A0A2D5FGD4_9GAMM	5.600e-42	73.12	TonB-dependent receptor n=1 Tax=Haliea sp. TaxID=1...	[more]
UPI0019D3D858	1.260e-40	73.12	TonB-dependent receptor n=2 Tax=Parahaliea mediter...	[more]
A0A6C0TWW8_9GAMM	2.350e-40	68.82	TonB-dependent receptor n=1 Tax=Kineobactrum salin...	[more]
A0A6L8BGX2_9PROT	9.160e-36	65.93	TonB-dependent receptor n=1 Tax=Proteobacteria bac...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000531	TonB-dependent receptor-like, beta-barrel	PFAM	PF00593	TonB_dep_Rec	coord: 7..91 e-value: 4.9E-10 score: 39.9
IPR036942	TonB-dependent receptor-like, beta-barrel domain superfamily	GENE3D	2.40.170.20		coord: 1..93 e-value: 4.9E-11 score: 44.5
None	No IPR available	PANTHER	PTHR40980	FAMILY NOT NAMED	coord: 1..91
None	No IPR available	SUPERFAMILY	56935	Porins	coord: 1..91

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig91508	contig	M-pyrifera_M_contig91508:495..776 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig91508.21203.1	mRNA_M-pyrifera_M_contig91508.21203.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig91508 495..776 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig91508.21203.1 ID=prot_M-pyrifera_M_contig91508.21203.1|Name=mRNA_M-pyrifera_M_contig91508.21203.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=94bp
LGYEKYGLDLRLAMSYRDRYLDEIVEEGLDRYTDAHNQWDLTAKYRFGDN
WMMYAEVINLNDEPAYYYAGSKSRPLQYDEFGRTAVVGVQYLY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000531	TonB-dep_rcpt_b-brl
IPR036942	TonB_rcpt_b-brl_sf