prot_M-pyrifera_M_contig90902.21073.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig90902.21073.1
Unique Name	prot_M-pyrifera_M_contig90902.21073.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	112

Homology

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BLAST of mRNA_M-pyrifera_M_contig90902.21073.1 vs. uniprot
Match: A0A7S4MSN4_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MSN4_9EUKA)

HSP 1 Score: 80.9 bits (198), Expect = 1.840e-17
Identity = 43/107 (40.19%), Postives = 57/107 (53.27%), Query Frame = 0

Query:    5 GFRFACKFEDLKENKGIKASIGRKSVALFLTKVEGRTRVYALENACTHQGVPLHTGTLTVVENVTHAVCPGHGYRFNCKTGHSKESGGAFKQRVYQVKKKGTEVWIK 111
            G+   C+F DLK  KGI+  + +K +A+FL        VY +++ CTHQ VPL  G +   +      CPGHG +FN KTG    S   + Q VY  K KG  VW K
Sbjct:   12 GYTLLCRFTDLKPEKGIRVKVNKKKLAIFLVN----DSVYVMDDKCTHQDVPLSPGDIEEYKGEPAVKCPGHGLKFNLKTGAC--SAKKYTQPVYASKVKGEIVWGK 112

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BLAST of mRNA_M-pyrifera_M_contig90902.21073.1 vs. uniprot
Match: A0A7S4IUR2_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IUR2_9EUKA)

HSP 1 Score: 80.9 bits (198), Expect = 6.170e-17
Identity = 43/107 (40.19%), Postives = 57/107 (53.27%), Query Frame = 0

Query:    5 GFRFACKFEDLKENKGIKASIGRKSVALFLTKVEGRTRVYALENACTHQGVPLHTGTLTVVENVTHAVCPGHGYRFNCKTGHSKESGGAFKQRVYQVKKKGTEVWIK 111
            G+   C+F DLK  KGI+  + +K +A+FL        VY +++ CTHQ VPL  G +   +      CPGHG +FN KTG    S   + Q VY  K KG  VW K
Sbjct:   61 GYTLLCRFTDLKPEKGIRVKVNKKKLAIFLVN----DSVYVMDDKCTHQDVPLSPGDIEEYKGEPAVKCPGHGLKFNLKTGAC--SAKKYTQPVYASKVKGEIVWGK 161

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BLAST of mRNA_M-pyrifera_M_contig90902.21073.1 vs. uniprot
Match: E6PD17_9ZZZZ (Putative Assimilatory nitrite reductase (NAD(P)H) small subunit n=3 Tax=root TaxID=1 RepID=E6PD17_9ZZZZ)

HSP 1 Score: 49.7 bits (117), Expect = 2.110e-5
Identity = 33/82 (40.24%), Postives = 43/82 (52.44%), Query Frame = 0

Query:    4 EGFRFACKFEDLKENKGIKASIGRKSVALFLTKVEGRTRVYALENACTHQGVPLHTGTLTVVENVTHAVCPGHGYRFNCKTG 85
            EGF    +   L  N  I  S+G   VA+F    E    ++ALENAC HQG PL  G+  V + V    CP H +RF+ +TG
Sbjct:    3 EGFLCVAERSALARNAAISRSVGAYEVAIFDCDGE----LFALENACPHQGGPLVEGS--VEQGVV--TCPWHAWRFDLRTG 76

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BLAST of mRNA_M-pyrifera_M_contig90902.21073.1 vs. uniprot
Match: A0A4Y9MW45_9ACTN (Non-heme iron oxygenase ferredoxin subunit n=1 Tax=Geodermatophilus sp. DF01_2 TaxID=2559610 RepID=A0A4Y9MW45_9ACTN)

HSP 1 Score: 49.7 bits (117), Expect = 2.890e-5
Identity = 31/105 (29.52%), Postives = 50/105 (47.62%), Query Frame = 0

Query:    6 FRFACKFEDLKENKGIKASIGRKSVALFLTKVEGRTRVYALENACTHQGVPLHTGTLTVVENVTHAVCPGHGYRFNCKTGHSKESGGAFKQRVYQVKKKGTEVWI 110
            F   C   ++ EN  ++  +    VA+   + EG   VYALE+ C+HQ VPL  G + + +      C  HG  F+ +TG            VY V+ +G +V++
Sbjct:    3 FERVCGLSEVPENGALRVELADIDVAVV--RFEGE--VYALEDRCSHQDVPLTEGDVELFDGAPTIECFLHGSCFDLRTGEPTNLPATEPVDVYPVRVEGEDVYV 103

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig90902.21073.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig90902.21073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A7S4MSN4_9EUKA	1.840e-17	40.19	Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ...	[more]
A0A7S4IUR2_9EUKA	6.170e-17	40.19	Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ...	[more]
E6PD17_9ZZZZ	2.110e-5	40.24	Putative Assimilatory nitrite reductase (NAD(P)H) ...	[more]
A0A4Y9MW45_9ACTN	2.890e-5	29.52	Non-heme iron oxygenase ferredoxin subunit n=1 Tax...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	GENE3D	2.102.10.10		coord: 2..111 e-value: 6.7E-22 score: 79.7
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	SUPERFAMILY	50022	ISP domain	coord: 6..110
IPR012748	Rieske-like [2Fe-2S] domain, NirD-type	PFAM	PF13806	Rieske_2	coord: 9..111 e-value: 3.4E-13 score: 49.4
None	No IPR available	PANTHER	PTHR21496:SF0	RIESKE DOMAIN-CONTAINING PROTEIN	coord: 6..111
None	No IPR available	PANTHER	PTHR21496	FERREDOXIN-RELATED	coord: 6..111
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROSITE	PS51296	RIESKE	coord: 7..110 score: 19.358

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig90902	contig	M-pyrifera_M_contig90902:86..421 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig90902.21073.1	mRNA_M-pyrifera_M_contig90902.21073.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig90902 86..421 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig90902.21073.1 ID=prot_M-pyrifera_M_contig90902.21073.1|Name=mRNA_M-pyrifera_M_contig90902.21073.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp
ADEEGFRFACKFEDLKENKGIKASIGRKSVALFLTKVEGRTRVYALENAC
THQGVPLHTGTLTVVENVTHAVCPGHGYRFNCKTGHSKESGGAFKQRVYQ
VKKKGTEVWIK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036922	Rieske_2Fe-2S_sf
IPR012748	Rieske-like_NirD
IPR017941	Rieske_2Fe-2S