prot_M-pyrifera_M_contig90880.21067.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90880.21067.1
Unique Nameprot_M-pyrifera_M_contig90880.21067.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length59
Homology
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BLAST of mRNA_M-pyrifera_M_contig90880.21067.1 vs. uniprot
Match: D7FZG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG5_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 1.210e-21
Identity = 46/53 (86.79%), Postives = 48/53 (90.57%), Query Frame = 0 
Query:    1 MKTSTDILSFPMHDMSDNPGVLPKVKFVAEMDLGDMFISLAYVDRQIARDREE 53
            M TSTDILSFP HDMS +PGVLPKV+F AEMDLGDMFISLAYVDRQI RDREE
Sbjct:  160 MSTSTDILSFPNHDMSGSPGVLPKVRFPAEMDLGDMFISLAYVDRQIKRDREE 212
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90880.21067.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZG5_ECTSI1.210e-2186.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023091Metalloprotease catalytic domain superfamily, predictedGENE3D3.40.390.30coord: 1..59
e-value: 2.9E-6
score: 28.7
IPR002036Endoribonuclease YbeYPFAMPF02130UPF0054coord: 2..52
e-value: 2.9E-8
score: 33.6
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 3..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90880contigM-pyrifera_M_contig90880:203..784 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90880.21067.1mRNA_M-pyrifera_M_contig90880.21067.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90880 191..784 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90880.21067.1 ID=prot_M-pyrifera_M_contig90880.21067.1|Name=mRNA_M-pyrifera_M_contig90880.21067.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=59bp
MKTSTDILSFPMHDMSDNPGVLPKVKFVAEMDLGDMFISLAYVDRQIARD
REEAAAAAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023091MetalPrtase_cat_dom_sf_prd
IPR002036YbeY