prot_M-pyrifera_M_contig90848.21061.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90848.21061.1
Unique Nameprot_M-pyrifera_M_contig90848.21061.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length225
Homology
BLAST of mRNA_M-pyrifera_M_contig90848.21061.1 vs. uniprot
Match: UPI00054002A7 (polygalacturonase QRT3 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00054002A7)

HSP 1 Score: 104 bits (259), Expect = 2.500e-22
Identity = 69/235 (29.36%), Postives = 115/235 (48.94%), Query Frame = 0
Query:    4 DLGGVVLDFCGGAYLLSQPIQFRGAAGNAVFTSGSFYASESFPTSSHLFQLTGIPS-----NASSVTR-------YRYMVFRDMYMDANRSASGCIALEHAEETLVERLVCVGYLESGVWSFGVGNELEIAHSWFHEYTEISKCHLNGSRTGIGIKLDNNDHLISSTVIFCTKVGVFVNGSATQLSNLHIYTEMETISGPCIEVA-PDVISIRIDSSYFDGCIVHAYNPTTLHVS 225
            DLGGVV+DF GG Y++++PI      GN V   G+  AS +FP   HL +L+  PS     N+++ T+       Y  + FRD+  D+N    G I ++ A    V     + +   G+   G G+E  I++++  +Y  +         TG  I + +ND+ I+  V+F   VG+ + G A  ++  H+Y +     G  I V  P +   RID+ Y D   +   +P  +H++
Sbjct:   99 DLGGVVIDFQGGNYMITKPISLPPLVGNVVVQGGTLRASNTFPKDRHLLELSSQPSKTILINSTTNTQFQISGIQYEDITFRDILFDSNFRGGGLIIVDSAR-IRVTNCYFLHFTTQGILVQG-GHETFISNTFLGQYETVGSHPSESQFTGTAIDIGSNDNAITDVVVFSAAVGITLRGQANIITGTHLYNKATFFGGVGILVKLPGLSQTRIDNCYLDYNSIVMEDPVQVHIT 331          
BLAST of mRNA_M-pyrifera_M_contig90848.21061.1 vs. uniprot
Match: A0A803L2Y0_CHEQI (Uncharacterized protein n=3 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803L2Y0_CHEQI)

HSP 1 Score: 101 bits (251), Expect = 2.610e-21
Identity = 70/235 (29.79%), Postives = 114/235 (48.51%), Query Frame = 0
Query:    4 DLGGVVLDFCGGAYLLSQPIQFRGAAGNAVFTSGSFYASESFPTSSHLFQLTGIPS------------NASSVTRYRYMVFRDMYMDANRSASGCIALEHAEETLVERLVCVGYLESGVWSFGVGNELEIAHSWFHEYTEISKCHLNGSRTGIGIKLDNNDHLISSTVIFCTKVGVFVNGSATQLSNLHIYTEMETISGPCIEVAPDVIS-IRIDSSYFDGCIVHAYNPTTLHVS 225
            DLGGVV+DF GG Y+++QPI F   +GN V   G+  AS +FP   HLF+L+  PS            N  S  +Y  + FRD+  D++    G   ++ A    V     + +   G+   G G+E  I+ ++  ++  +         TG  I + +ND+ I++ V+F   VG+ + G A  ++  H+Y +     G  I V    +S  RID+ Y D   +   +P  +HV+
Sbjct:   67 DLGGVVIDFQGGNYVINQPISFPPLSGNVVVRGGTIRASNTFPGDRHLFELSSKPSKHLHLNSTTNTQNQISGIQYVDITFRDILFDSSFRGGGLTIIDSAR-IRVTNCYFLHFSTQGILVQG-GHETFISDTFLGQHETVGGDPGERQFTGTAIDVGSNDNAITNVVVFSAAVGIILRGQANMITGAHLYNKATDFGGVGILVKLAGLSQTRIDNCYLDYNSIVMEDPVQVHVT 299          
BLAST of mRNA_M-pyrifera_M_contig90848.21061.1 vs. uniprot
Match: A0A803MXR9_CHEQI (Uncharacterized protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803MXR9_CHEQI)

HSP 1 Score: 100 bits (249), Expect = 8.310e-21
Identity = 70/235 (29.79%), Postives = 114/235 (48.51%), Query Frame = 0
Query:    4 DLGGVVLDFCGGAYLLSQPIQFRGAAGNAVFTSGSFYASESFPTSSHLFQLTGIPS------------NASSVTRYRYMVFRDMYMDANRSASGCIALEHAEETLVERLVCVGYLESGVWSFGVGNELEIAHSWFHEYTEISKCHLNGSRTGIGIKLDNNDHLISSTVIFCTKVGVFVNGSATQLSNLHIYTEMETISGPCIEVAPDVIS-IRIDSSYFDGCIVHAYNPTTLHVS 225
            DLGGVV+DF GG Y+++QPI F   +GN V   G+  AS +FP   HLF+L+  PS            N  S  +Y  + FRD+  D++    G   ++ A    V     + +   G+   G G+E  I+ ++  ++  +         TG  I + +ND+ I++ V+F   VG+ + G A  ++  H+Y +     G  I V    +S  RID+ Y D   +   +P  +HV+
Sbjct:  207 DLGGVVIDFQGGNYVINQPIPFPPLSGNVVVRGGTIRASNTFPGDRHLFELSSKPSKHLHINSTTNTQNQISGIQYVDITFRDILFDSSFRGGGLTIVDSAR-IRVTNCYFLHFSTQGILVQG-GHETFISDTFLGQHETVGGDPGERQFTGTAIDVGSNDNAITNVVVFSAAVGIILRGQANMITGAHLYNKATDFGGVGILVKLAGLSQTRIDNCYLDYNSIVMEDPVQVHVT 439          
BLAST of mRNA_M-pyrifera_M_contig90848.21061.1 vs. uniprot
Match: A0A803QHF1_CANSA (Uncharacterized protein n=3 Tax=Cannabis sativa TaxID=3483 RepID=A0A803QHF1_CANSA)

HSP 1 Score: 95.9 bits (237), Expect = 2.600e-19
Identity = 68/238 (28.57%), Postives = 113/238 (47.48%), Query Frame = 0
Query:    1 GSPDLGGVVLDFCGGAYLLSQPIQFRGAAGNAVFTSGSFYASESFPTSSHLFQL---TGIPSNASSVTR---------YRYMVFRDMYMDANRSASGCIALEHAEETLVERLVCVGYLESGVWSFGVGNELEIAHSWFHEYTEISKCHLNGSRTGIGIKLDNNDHLISSTVIFCTKVGVFVNGSATQLSNLHIYTEMETISGPCIEVAPDVIS-IRIDSSYFDGCIVHAYNPTTLHVS 225
            G  DLGGVV+DF GG Y +SQPI+     GN V   G+  AS +FP + +L +L   + +P +  S            Y  + FRD+  D++    G   ++      +     + +   G+     G+E  I++ +  +Y+ I         TG+GI +++ND+ I+   IF  +VG+ + G A  ++ +H Y +     G  I V    IS  RID+ Y D   +   +P  +HV+
Sbjct:  107 GINDLGGVVIDFQGGNYKISQPIRLPSGGGNVVVKGGTLRASHTFPGNRYLIELWSPSSVPIDTDSPHDFSGDSVGIFYEDITFRDILFDSSYRGGGIFIIDSVR-IRINNCFFLHFSTKGIL-VQKGHETFISNCFLGQYSTIGGDKGEKYFTGVGIDIESNDNAITDVAIFSAEVGIILRGQANMVTGVHCYNKATGFGGIGILVKVAWISQTRIDNCYMDYTSIVIEDPVQVHVT 342          
BLAST of mRNA_M-pyrifera_M_contig90848.21061.1 vs. uniprot
Match: A0A830CPG3_9LAMI (Polygalacturonase qrt3 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830CPG3_9LAMI)

HSP 1 Score: 93.2 bits (230), Expect = 1.810e-18
Identity = 71/248 (28.63%), Postives = 110/248 (44.35%), Query Frame = 0
Query:    1 GSPDLGGVVLDFCGGAYLLSQPIQFRGAAGNAVFTSGSFYASESFPTSSHLFQL--TGIPSNASSVTR-----------------YRYMVFRDMYMDANRSASGCIALE----HAEETLVERLVCVGYLESGVWSFGVGNELEIAHSWFHEYTEISKCHLNGSRTGIGIKLDNNDHLISSTVIFCTKVGVFVNGSATQLSNLHIYTEMETISGPCIEVAPDVISIRIDSSYFDGCIVHAYNPTTLHVS 225
            G  DLGGVV+DF GG + +SQPI+F    GN V   G+  AS++FP   HL +L  TG P  +SS                    Y  + FRD+  D++    G + +     H  ++   R    G L    W    G+E  +++ +  ++         GS  GI I + + D+ ++  V+F    G+ + G+A  L+ +H Y +     G  I V       RI S Y D   +   +P  +HVS
Sbjct:   36 GISDLGGVVIDFQGGNFKISQPIRFPPGIGNIVVQGGTLRASDTFPGDRHLIELWATGSPKPSSSTKNAPANFSDMKDMNRDGMTYEDITFRDILFDSSFRGGGLLVINSARVHVADSFFLRFTTQGILVK--W----GHETFVSNCFLGQHPTDGGDPAEGSYAGIAIDIASTDNAVTDVVVFSADTGIVLRGNANILTGVHCYNKAMGFGGVGISVQS--AQNRIISPYLDYNNIVIVDPDQVHVS 275          
BLAST of mRNA_M-pyrifera_M_contig90848.21061.1 vs. uniprot
Match: A0A6B2L5B9_9EUKA (Pectate_lyase_3 domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L5B9_9EUKA)

HSP 1 Score: 89.4 bits (220), Expect = 3.930e-17
Identity = 68/226 (30.09%), Postives = 110/226 (48.67%), Query Frame = 0
Query:    1 GSPDLGGVVLDFCGGAYLLSQPIQFRGAAGNAVFTSGSFYASESFPTSSHLFQLTGIPSNASSVTRYRYMVFRDMYMDANRSASGCIALEHAEETLV-ERLVCVGYLESGVWSFGVGNELEIAHSWFHEYTEISKCHLNGSRTGIGIKLDNNDHLISSTVIFCTKVGVFVNGSATQLSNLHIYTEMETISGPCIEV-APDVISIRIDSSYFDGCIVHAYNPTTLHV 224
            G  DLGG  +D  GG YL+SQPI      GN  F SG+  AS +FP    L ++     +    +    + F DM +D+   A+G + +       V  ++  +G+  +G+   G G+E  I  +W  +Y  +     + + T  GI+L  NDH I++T++F ++VGV + G+A  L+ +H +    +  G  I V AP     R+ + Y D   V A  P  L +
Sbjct:   39 GITDLGGATVDLGGGDYLISQPIVIPVYYGNFHFKSGTLRASSAFPKDRFLIEIGSKSCSNGQGSCNENVGFEDMMLDSQLIAAGGLHIIATMGANVGPQMFFLGFQNAGIRVSG-GHETMIHETWLGQY--LYSDPRSSNPTANGIELLGNDHYITNTIVFSSRVGVLITGAANLLTGVHTWNLASSEGGIGIYVDAPGYTQNRLVACYLDFNSVVAVAPEHLSI 261          
BLAST of mRNA_M-pyrifera_M_contig90848.21061.1 vs. uniprot
Match: G7INF1_MEDTR (Polygalacturonase QRT3-like protein n=3 Tax=Medicago truncatula TaxID=3880 RepID=G7INF1_MEDTR)

HSP 1 Score: 86.7 bits (213), Expect = 4.560e-16
Identity = 66/241 (27.39%), Postives = 111/241 (46.06%), Query Frame = 0
Query:    1 GSPDLGGVVLDFCGGAYLLSQPIQFRGAAGNAVFTSGSFYASESFPTSSHLFQLTGIPS----NASSVTR-----------YRYMVFRDMYMDANRSASGCIALEHAEETLVERLVCVGYLESGVWSFGVGNELEIAHSWFHEYTEISKCHLNGSRTGIGIKLDNNDHLISSTVIFCTKVGVFVNGSATQLSNLHIYTEMETISGPCIEVAPDVIS-IRIDSSYFDGCIVHAYNPTTLHVS 225
            G  DLGGV++DF GG Y +S PI F  ++GN V   G+  AS +FPT  +L +L    S    NA++              Y  + FRD+  D++    G   ++ A    ++    + +   G+     G+E  I+ S+  +++ +         +G  I L +ND+ I+   IF   +G+ V G A  ++ +H Y +     G  I +     S  RID+ Y D   +   +P  +HV+
Sbjct:  110 GIRDLGGVIIDFQGGNYKISNPITFPSSSGNLVVKGGTLRASNTFPTDRYLVELCASSSKVLQNATTAYNNKLLQQTIGIYYEDITFRDILFDSSYRGGGIFIVDSAR-IRIDNCFFLHFNTEGI-KVQSGHETFISSSFLGQHSTVGGDKGERQFSGTAIDLASNDNAITDVAIFSAAIGIVVRGQANIITGVHCYNKATGFGGIGILLKLAGNSQTRIDNCYMDYNSIVMEDPVQVHVT 348          
BLAST of mRNA_M-pyrifera_M_contig90848.21061.1 vs. uniprot
Match: A0A7J7GWP2_CAMSI (Uncharacterized protein n=2 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7GWP2_CAMSI)

HSP 1 Score: 78.6 bits (192), Expect = 2.650e-13
Identity = 62/241 (25.73%), Postives = 99/241 (41.08%), Query Frame = 0
Query:    1 GSPDLGGVVLDFCGGAYLLSQPIQFRGAAGNAVFTSGSFYASESFPTSSHLFQLTGIPSNASSVTR----------------YRYMVFRDMYMDANRSASGCIALEHAEETLVERLVCVGYLESGVWSFGVGNELEIAHSWFHEYTEISKCHLNGSRTGIGIKLDNNDHLISSTVIFCTKVGVFVNGSATQLSNLHIYTEMETISGPCIEVAPDVISIRIDSSYFDGCIVHAYNPTTLHVS 225
            G  DLGGVV+DF GG Y +S PI+F    GN +   G+  AS +FP   HL +L    S   + T                 Y  + FRD+  D++    G + ++ A    +     + +   G+     G+E  I+  +  +++ I         +G GI L +ND+ I+  VIF                  H Y +     G  + +       RID+ Y D   +   +P+ +HVS
Sbjct:   60 GIKDLGGVVIDFQGGNYSISNPIRFPSGVGNVLIQGGTLRASNTFPGDRHLIELWAPNSQPLNNTTSSDPLSGQENQNYGIYYEDITFRDILFDSSFRGGGLLVIDSAR-IRINNCFFLHFTTEGIL-VERGHETFISSCFLGQHSTIGGDKEERDFSGTGIILASNDNAITDVVIFSAATXXXXXXXXXXXXXXHCYNKATYFGG--VGILVQAAQTRIDNCYLDFNAIVIEDPSQIHVS 296          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90848.21061.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
UPI00054002A72.500e-2229.36polygalacturonase QRT3 n=1 Tax=Beta vulgaris subsp... [more]
A0A803L2Y0_CHEQI2.610e-2129.79Uncharacterized protein n=3 Tax=Chenopodium quinoa... [more]
A0A803MXR9_CHEQI8.310e-2129.79Uncharacterized protein n=1 Tax=Chenopodium quinoa... [more]
A0A803QHF1_CANSA2.600e-1928.57Uncharacterized protein n=3 Tax=Cannabis sativa Ta... [more]
A0A830CPG3_9LAMI1.810e-1828.63Polygalacturonase qrt3 n=1 Tax=Phtheirospermum jap... [more]
A0A6B2L5B9_9EUKA3.930e-1730.09Pectate_lyase_3 domain-containing protein n=1 Tax=... [more]
G7INF1_MEDTR4.560e-1627.39Polygalacturonase QRT3-like protein n=3 Tax=Medica... [more]
A0A7J7GWP2_CAMSI2.650e-1325.73Uncharacterized protein n=2 Tax=Camellia sinensis ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039279Polygalacturonase QRT3-likePANTHERPTHR33928FAMILY NOT NAMEDcoord: 3..225
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 15..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90848contigM-pyrifera_M_contig90848:6..680 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90848.21061.1mRNA_M-pyrifera_M_contig90848.21061.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90848 6..680 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90848.21061.1 ID=prot_M-pyrifera_M_contig90848.21061.1|Name=mRNA_M-pyrifera_M_contig90848.21061.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=225bp
GSPDLGGVVLDFCGGAYLLSQPIQFRGAAGNAVFTSGSFYASESFPTSSH
LFQLTGIPSNASSVTRYRYMVFRDMYMDANRSASGCIALEHAEETLVERL
VCVGYLESGVWSFGVGNELEIAHSWFHEYTEISKCHLNGSRTGIGIKLDN
NDHLISSTVIFCTKVGVFVNGSATQLSNLHIYTEMETISGPCIEVAPDVI
SIRIDSSYFDGCIVHAYNPTTLHVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039279QRT3-like
IPR011050Pectin_lyase_fold/virulence