prot_M-pyrifera_M_contig90846.21060.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90846.21060.1
Unique Nameprot_M-pyrifera_M_contig90846.21060.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length220
Homology
BLAST of mRNA_M-pyrifera_M_contig90846.21060.1 vs. uniprot
Match: A0A401T6M9_CHIPU (Tr-type G domain-containing protein n=1 Tax=Chiloscyllium punctatum TaxID=137246 RepID=A0A401T6M9_CHIPU)

HSP 1 Score: 96.7 bits (239), Expect = 1.460e-19
Identity = 74/226 (32.74%), Postives = 106/226 (46.90%), Query Frame = 0
Query:    1 DEVEAPLFRDLGRFFVKSIQCFHKSVEEAHKGDRVGLLIPSF-PTTMERGVICAPNSVPVTTRALAAIFPIPYHKPHTPSPAHLHVSVAHTTSPAKVTFFAPNYTASAIETTXXXXXXXXXXXXXXXXXXXXXXXXXX--YLEGKEMVREVWQLALLEFGEGVAVARGSRVVGMKLDGESGGKGCRVVFHGYILTP---------SPPPISFYKIKTYQGMVERKS 214
            D VE P  +   +  VKS+Q F + V  A +GDRVG+ +  F P  +ERG++CAP+S+     A+ ++  IPY+K    + A  H++V H T   KVTFF+P       E                                +G ++ R+ W  ALLEF + V   R S V+G KLD +     CR+ FHG +L           S P +  YK+K  +G VER S
Sbjct:  266 DSVEIPSLKVSRK--VKSMQMFRQPVNTAIQGDRVGICVTQFDPKQLERGLVCAPDSLYTLHAAIMSVKKIPYYKGSVHTKAKFHITVGHETVMGKVTFFSPAIEDFDSEPVMDRFDFDREYLYQEEYLSQAKDVDVDKSQADGSKVPRQQW--ALLEFEKPVTCPRLSLVIGSKLDTDIHANTCRLAFHGVLLEGFEEKNYAEVSLPKLKVYKLKHKEGQVERVS 487          
BLAST of mRNA_M-pyrifera_M_contig90846.21060.1 vs. uniprot
Match: UPI001B7F7893 (selenocysteine-specific elongation factor isoform X1 n=6 Tax=Galeoidea TaxID=119195 RepID=UPI001B7F7893)

HSP 1 Score: 95.1 bits (235), Expect = 5.340e-19
Identity = 73/230 (31.74%), Postives = 107/230 (46.52%), Query Frame = 0
Query:    1 DEVEAPLFRDLGRFFVKSIQCFHKSVEEAHKGDRVGLLIPSF-PTTMERGVICAPNSVPVTTRALAAIFPIPYHKPHTPSPAHLHVSVAHTTSPAKVTFFAP---NYTASAIETTXXXXXXXXXXXXXXXXXXXXXXXXXX---YLEGKEMVREVWQLALLEFGEGVAVARGSRVVGMKLDGESGGKGCRVVFHGYILTP---------SPPPISFYKIKTYQGMVERKS 214
            D VE P  +   +  VKS+Q FHK V  A +GDRVG+ +  F P  +ERG++CAP S+     A+ ++  IPY K    + A  H++V H T   +VTFF+P   ++ +  +                                 +EG ++ R+ W  ALLEF + V   R   V+G KLD +     CR+ FHG +L           S P +  +K+K   G VER S
Sbjct:  244 DSVEIPSLKVNRK--VKSMQMFHKPVNTAIQGDRVGICVTQFDPKQLERGLVCAPESLRTLNAAIISVKKIPYFKGLVHTKAKFHITVGHETVMGRVTFFSPAPEDFESEPVMNCFVFDREYLYQEEYLLQAKGIGVDKSLANDQVEGSQVPRQQW--ALLEFEKPVTCPRLCLVIGSKLDTDIHANTCRLAFHGVLLEGFEEKNYAEVSLPKLKVFKLKHKDGQVERVS 469          
BLAST of mRNA_M-pyrifera_M_contig90846.21060.1 vs. uniprot
Match: UPI0003314634 (selenocysteine-specific elongation factor n=1 Tax=Sorex araneus TaxID=42254 RepID=UPI0003314634)

HSP 1 Score: 90.1 bits (222), Expect = 2.850e-17
Identity = 67/233 (28.76%), Postives = 107/233 (45.92%), Query Frame = 0
Query:    1 DEVEAPLFRDLGRFFVKSIQCFHKSVEEAHKGDRVGLLIPSF-PTTMERGVICAPNSVPVTTRALAAIFPIPYHKPHTPSPAHLHVSVAHTTSPAKVTFFAP---NYTASAIETTXXXXXXXXXXXXXXXXXXXXXXXXXXYLEGKEMVREVWQLALLEFGEGVAVARGSRVVGMKLDGESGGKGCRVVFHGYILTPSP---------PPISFYKIKTYQGMVERKSGKEVIV 220
            D VE P  + + +  VKS+Q FH  V  A +GDR+G+ +  F P  +ERG++CAP ++     AL ++  IPY +    + A  H++V H T   ++TFF P   ++    +                               EG+   R+ W  AL+EF + V   +   V+G +LD +     CR+ FHG +L   P         P +  YK+K+ QG+VER      ++
Sbjct:  228 DSVEIPALKVVKK--VKSMQMFHTPVTSAMQGDRLGICVTQFDPKLLERGLVCAPETLHTIHAALVSVEKIPYFRGPLQTKAKFHITVGHETVMGRLTFFGPEPEHFDREPLLDAFDFSREYVFQEQYLSREPGPDGGEAPAAEGR-CPRQQW--ALVEFEKPVTCPQLCLVIGSRLDVDVHTSACRLAFHGVLLHGLPDRGYAESLLPQLKVYKLKSKQGLVERAMDDHSVI 455          
BLAST of mRNA_M-pyrifera_M_contig90846.21060.1 vs. uniprot
Match: I3N3R5_ICTTR (Eukaryotic elongation factor, selenocysteine-tRNA specific n=7 Tax=Marmotini TaxID=337730 RepID=I3N3R5_ICTTR)

HSP 1 Score: 89.7 bits (221), Expect = 3.380e-17
Identity = 66/229 (28.82%), Postives = 103/229 (44.98%), Query Frame = 0
Query:    1 DEVEAPLFRDLGRFFVKSIQCFHKSVEEAHKGDRVGLLIPSF-PTTMERGVICAPNSVPVTTRALAAIFPIPYHKPHTPSPAHLHVSVAHTTSPAKVTFFAPNYT-------ASAIETTXXXXXXXXXXXXXXXXXXXXXXXXXXYLEGKEMVREVWQLALLEFGEGVAVARGSRVVGMKLDGESGGKGCRVVFHGYIL---------TPSPPPISFYKIKTYQGMVER 212
            D VE P  + + +  VKS+Q FH  V  A +GDR+G+ +  F P  +ERG++CAP S+P    A+ ++  IPY +    + A  H+++ H T   ++ FF+P          A++ +                               G    R+ W  AL+EF   V   R   V+G +LD +     CR+ FHG +L           + P +  YK+K  QG+VER
Sbjct:  148 DSVEIPALKVVKK--VKSMQMFHTPVTSAMQGDRLGICVTQFDPKLLERGLVCAPESLPTLHAAIISVEKIPYFRGPLLTKAKFHITLGHETVMGRLLFFSPEPQRFDQEPQAASFDLAQEYLFQERYLSRDPATEGDQADDRAGQAPGGRCPRQQW--ALVEFERPVTCPRLCLVIGSRLDADIHANSCRLAFHGRLLHGLQDKGYAESALPALRVYKLKHKQGLVER 372          
BLAST of mRNA_M-pyrifera_M_contig90846.21060.1 vs. uniprot
Match: A0A401NSC9_SCYTO (Tr-type G domain-containing protein n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401NSC9_SCYTO)

HSP 1 Score: 89.0 bits (219), Expect = 6.180e-17
Identity = 71/230 (30.87%), Postives = 104/230 (45.22%), Query Frame = 0
Query:    1 DEVEAPLFRDLGRFFVKSIQCFHKSVEEAHKGDRVGLLIPSF-PTTMERGVICAPNSVPVTTRALAAIFPIPYHKPHTPSPAHLHVSVAHTTSPAKVTFFAPNYTASAIETTXXXXXXXXXXXXXXXXXXXXXXXXXX------YLEGKEMVREVWQLALLEFGEGVAVARGSRVVGMKLDGESGGKGCRVVFHGYILTP---------SPPPISFYKIKTYQGMVERKS 214
            D VE P  +   +  VKS+Q F K V  A +GDRVG+ +  F P  +ERG++CAP+S+     A+ ++  IPY K    + A  H++V H T   +VTFF+P       +                                    EG ++ R+ W  ALLEF + V   +   V+G KLD +     CR+ FHG +L           S P +  +K+K  +G VER S
Sbjct:  243 DNVEIPSLKVSRK--VKSMQMFRKPVNTAIQGDRVGICVTQFDPKQLERGLVCAPDSLRTLYAAIISVRKIPYFKGSVHTKAKFHITVGHETVMGRVTFFSPAPEDFESDPRMDCFVFDREYLYQEEYLSQAKDAGADRGQASTQAEGGKLPRQQW--ALLEFEKPVTCPKLCLVIGSKLDTDIHANTCRLAFHGVLLEGFEEKNYAEVSLPKLKVFKLKHKEGQVERVS 468          
BLAST of mRNA_M-pyrifera_M_contig90846.21060.1 vs. uniprot
Match: A0A812NMD7_9DINO (Eefsec protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812NMD7_9DINO)

HSP 1 Score: 88.2 bits (217), Expect = 1.460e-16
Identity = 64/227 (28.19%), Postives = 98/227 (43.17%), Query Frame = 0
Query:    1 DEVEAPLFRDLGRFFVKSIQCFHKSVEEAHKGDRVGLLIPSF-PTTMERGVICAPNSVPVTTRALAAIFPIPYHKPHTPSPAHLHVSVAHTTSPAKVTFFAPNYTASAIETTXXXXXXXXXXXXXXXXXXXXXXXXXXYLEGKEMVREVWQLALLEFGEGVAVARGSRVVGMKLDGESGGKGCRVVFHGYILTP-----------SPPPISFYKIKTYQGMVERKSG 215
            D +E P    L  + VKS Q F ++V    +GDR GL +P   P  +ERG+ CAP SVP  +  +A +  + + K   PS +  HVS  HTT   KV F      A+A  T                             +        WQ AL+     + +  G+R++G +LD + GGK CR+ ++G+ +             +  P+  Y+ +   G+VER  G
Sbjct:  251 DTLELPALAAL--YKVKSAQVFRRAVSCVRQGDRAGLNLPGLDPALLERGIACAPGSVPTASGIVALVRKVRFFKGDMPSESKCHVSAGHTTVVGKVIFAGARELAAAGVTEANARQVRHCPPGTEYAWQDGLVGRLPGPKAPGSDGAAWQWALIGLDTPILLPAGTRLIGSRLDADIGGKTCRLAWYGHAVASFSFDAAQGGGFAAAPVRLYRQRGRSGVVERVKG 475          
BLAST of mRNA_M-pyrifera_M_contig90846.21060.1 vs. uniprot
Match: A0A699Y7D3_HAELA (Tr-type G domain-containing protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699Y7D3_HAELA)

HSP 1 Score: 86.3 bits (212), Expect = 5.920e-16
Identity = 67/211 (31.75%), Postives = 105/211 (49.76%), Query Frame = 0
Query:   16 VKSIQCFHKSVEEAHKGDRVGLLIPSF-PTTMERGVICAPNSVPVTTRALAAIFPIPYHKPHTPSPAHLHVSVAHTTSPAKVTFFA-PNYTASAIETTXXXXXXXXXXXXXXXXXXXXXXXXXXYLEGKEMVREVWQLAL----LEFGEGVA-VARGSRVVGMKLDGESGGKGCRVVFHGYILT---PSPPP----ISFYKIKTYQGMVER 212
            VKS+Q F + V +A +GDRVG+ +    P+ +ERG+ CAP +VP    A+AA+  I ++    PS A  HVSV HTT  A +TFF  P+    + E                                 +M+  + ++AL    + F +    V +G+ V+G K DG+  G+ CR+ F+G ++T   PS P     +  YK+K  +G++ER
Sbjct:  267 VKSMQVFKRPVTKASQGDRVGICVTQLDPSLIERGLACAPGTVPTFNGAVAAVEKIRFYAGQVPSKAKFHVSVGHTTVMASLTFFGLPDGQGVSQEAALV-----------------------------QMIENLGRMALTGVPMPFDKSRDYVYQGALVIGAKFDGDIHGESCRLAFYGRLVTLINPSKPAELQQLRVYKMKEKRGVIER 448          
BLAST of mRNA_M-pyrifera_M_contig90846.21060.1 vs. uniprot
Match: UPI0003F058C4 (selenocysteine-specific elongation factor n=1 Tax=Elephantulus edwardii TaxID=28737 RepID=UPI0003F058C4)

HSP 1 Score: 85.9 bits (211), Expect = 8.480e-16
Identity = 66/232 (28.45%), Postives = 104/232 (44.83%), Query Frame = 0
Query:    1 DEVEAPLFRDLGRFFVKSIQCFHKSVEEAHKGDRVGLLIPSF-PTTMERGVICAPNSVPVTTRALAAIFPIPYHKPHTPSPAHLHVSVAHTTSPAKVTFFAPNYTASAIETTXXXXXXXXXXXXXXXXXXXXXXXXXXYLEGKEMVREVWQL----------ALLEFGEGVAVARGSRVVGMKLDGESGGKGCRVVFHGYIL---------TPSPPPISFYKIKTYQGMVER 212
            D VE P  + + +  VKS+Q FH  +  A +GDR+GL +  F P ++ERG++CAP S+     A+ ++  IPY +    + A  H++V H T   ++ FF+P     + E                              +G E  ++  Q           AL+EF + V   R   ++G +LD +     CR+ FHG +L           S P +  YK+K  QG+VER
Sbjct:  252 DSVEIPALKVVKK--VKSMQMFHMPITSAMQGDRLGLCVTQFDPKSLERGLVCAPESLHTIHAAIVSVEKIPYFRGALQTKAKFHITVGHETVMGRLMFFSPTPENFSHEPVLDSFDFSHEYLFQEQFLCKDLVPT----DGSEANQQAGQTTEGQCPQQQWALVEFEKAVTCPRLCLLIGSRLDADIHANTCRLAFHGTLLHGLEDKHYAESSLPKLKVYKLKHKQGLVER 477          
BLAST of mRNA_M-pyrifera_M_contig90846.21060.1 vs. uniprot
Match: A0A6I9MBY8_PERMB (Eukaryotic elongation factor, selenocysteine-tRNA specific n=6 Tax=Cricetidae TaxID=337677 RepID=A0A6I9MBY8_PERMB)

HSP 1 Score: 85.5 bits (210), Expect = 1.140e-15
Identity = 68/233 (29.18%), Postives = 101/233 (43.35%), Query Frame = 0
Query:    1 DEVEAPLFRDLGRFFVKSIQCFHKSVEEAHKGDRVGLLIPSF-PTTMERGVICAPNSVPVTTRALAAIFPIPYHKPHTPSPAHLHVSVAHTTSPAKVTFFAPNYTASAIETTXXXXXXXXXXXXXXXXXXXXXXXXXX-----------YLEGKEMVREVWQLALLEFGEGVAVARGSRVVGMKLDGESGGKGCRVVFHGYILTPSP---------PPISFYKIKTYQGMVER 212
            D VE P  + + +  VKS+Q FH  V  A +GDR+G+ +  F P  +ERG++CAP S+     AL ++  IPY +    + A  H++V H T   +  FF+P      +E T                                     +  G +  R+ W  ALLEF + V   R   V+G +LD +     CR+ FHG +L             P +  YK+K   G+VER
Sbjct:  240 DSVEIPALKVVKK--VKSMQMFHTPVTSAMQGDRLGICVTQFDPKLLERGLVCAPESLHTIHAALISVEKIPYFRGPLQTKAKFHITVGHETVMGRTLFFSPAPANFDLEPTLDSFDLSREYLFQEQYLCKDSMPTGTEGGTEVDRKAGHAPGGQCPRQQW--ALLEFEKPVTCPRLCLVIGSRLDADIHTNTCRLAFHGVLLQGLEDKNYTESFLPSLRVYKLKHKHGLVER 468          
BLAST of mRNA_M-pyrifera_M_contig90846.21060.1 vs. uniprot
Match: UPI0020184BC6 (selenocysteine-specific elongation factor isoform X1 n=3 Tax=Perognathus longimembris pacificus TaxID=214514 RepID=UPI0020184BC6)

HSP 1 Score: 85.1 bits (209), Expect = 1.540e-15
Identity = 66/231 (28.57%), Postives = 105/231 (45.45%), Query Frame = 0
Query:    1 DEVEAPLFRDLGRFFVKSIQCFHKSVEEAHKGDRVGLLIPSF-PTTMERGVICAPNSVPVTTRALAAIFPIPYHKPHTPSPAHLHVSVAHTTSPAKVTFFAP---NYTASAIETTXXXXXXXXXXXXXXXXXXXXXXXXXXYLEGKEMV------REVWQLALLEFGEGVAVARGSRVVGMKLDGESGGKGCRVVFHGYILTPSP---------PPISFYKIKTYQGMVER 212
            D VE P  + + +  VKS+Q FH  V  A +GDR+GL +  F P  +ERG++CAP+++P    AL ++  IPY +    + A  H++V H T   ++ FF+P   ++       +                           ++G          R+ W  AL+EF + V   R   V+G +LD +     CR+ FHG +L             P +  YK+K  QG+V+R
Sbjct:  236 DSVEIPALKVVRK--VKSMQMFHTPVTAAMQGDRLGLCVTQFDPKLLERGLVCAPDTLPTVHAALISVEKIPYFRGPLHTKAKFHITVGHETVMGRLLFFSPAPDHFDREPALDSFDFSQEYLFQEQYLCKDVAPAAAASSQVDGAGPAPEGRHPRQQW--ALVEFEKPVTCPRLCLVIGSRLDADIHSNSCRLAFHGVLLHGLEDRNYAESFLPALRVYKLKHKQGLVDR 462          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90846.21060.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401T6M9_CHIPU1.460e-1932.74Tr-type G domain-containing protein n=1 Tax=Chilos... [more]
UPI001B7F78935.340e-1931.74selenocysteine-specific elongation factor isoform ... [more]
UPI00033146342.850e-1728.76selenocysteine-specific elongation factor n=1 Tax=... [more]
I3N3R5_ICTTR3.380e-1728.82Eukaryotic elongation factor, selenocysteine-tRNA ... [more]
A0A401NSC9_SCYTO6.180e-1730.87Tr-type G domain-containing protein n=1 Tax=Scylio... [more]
A0A812NMD7_9DINO1.460e-1628.19Eefsec protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]
A0A699Y7D3_HAELA5.920e-1631.75Tr-type G domain-containing protein n=1 Tax=Haemat... [more]
UPI0003F058C48.480e-1628.45selenocysteine-specific elongation factor n=1 Tax=... [more]
A0A6I9MBY8_PERMB1.140e-1529.18Eukaryotic elongation factor, selenocysteine-tRNA ... [more]
UPI0020184BC61.540e-1528.57selenocysteine-specific elongation factor isoform ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.30.10coord: 1..86
e-value: 4.5E-8
score: 34.9
NoneNo IPR availablePANTHERPTHR43721FAMILY NOT NAMEDcoord: 16..184
NoneNo IPR availablePANTHERPTHR43721:SF11SELENOCYSTEINE-SPECIFIC ELONGATION FACTORcoord: 16..184
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 12..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90846contigM-pyrifera_M_contig90846:123..782 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90846.21060.1mRNA_M-pyrifera_M_contig90846.21060.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90846 123..782 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90846.21060.1 ID=prot_M-pyrifera_M_contig90846.21060.1|Name=mRNA_M-pyrifera_M_contig90846.21060.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=220bp
DEVEAPLFRDLGRFFVKSIQCFHKSVEEAHKGDRVGLLIPSFPTTMERGV
ICAPNSVPVTTRALAAIFPIPYHKPHTPSPAHLHVSVAHTTSPAKVTFFA
PNYTASAIETTTSSSSTTTSSSPTTSSSPPLAFPSPPYLEGKEMVREVWQ
LALLEFGEGVAVARGSRVVGMKLDGESGGKGCRVVFHGYILTPSPPPISF
YKIKTYQGMVERKSGKEVIV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009000Transl_B-barrel_sf