prot_M-pyrifera_M_contig90842.21057.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90842.21057.1
Unique Nameprot_M-pyrifera_M_contig90842.21057.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length210
Homology
BLAST of mRNA_M-pyrifera_M_contig90842.21057.1 vs. uniprot
Match: F0W5X9_9STRA (Importinlike protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W5X9_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 5.620e-18
Identity = 59/196 (30.10%), Postives = 99/196 (50.51%), Query Frame = 0
Query:    6 PSLFRDCVDDAADVALSLAESEDWMPETRLAALELLVSLASFGGAVARRSSVLAERAVPAAVGLFAGVVDDDENTEEALLEWGRARNDEHSLTMEPSDDDPL-EDGGITALSRLSHALGGASVMDRLVPLLGELVEDDRWERRRAAAIALTAIGAGARKEILREVRGVSESVWRPLLRDAHPRVRNVTAASIAQVA 200
            P  F+  ++   +  L +  S++  PETR  ALEL+V++        R+SS   +  +P  + L   V DD E        W + + D   + ME  DD+ +  + G  A++RLS ALGG S++  ++P++   + D  W +RRAA  A   +G G++ ++  ++  V   +  P L D HPRV+      I Q+A
Sbjct:  241 PKFFKSALEQLGNAMLVIMTSQEMSPETRDLALELVVTICENASGTVRKSSQFIQMLLPTTLQLICEVEDDPE--------W-KLKFDSPDMYMESHDDENIVSEAGANAITRLSIALGGKSILPVVIPVIRSYLADQDWRKRRAALYATCLLGEGSKAQLESQLASVVGMIM-PYLEDGHPRVQYSAIYCIGQLA 426          
BLAST of mRNA_M-pyrifera_M_contig90842.21057.1 vs. uniprot
Match: A0A5A8EEB9_CAFRO (Uncharacterized protein n=6 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EEB9_CAFRO)

HSP 1 Score: 77.4 bits (189), Expect = 6.790e-13
Identity = 56/168 (33.33%), Postives = 85/168 (50.60%), Query Frame = 0
Query:   33 TRLAALELLVSLASFGGAVARRSSVLAERAVPAAVGLFAGVVDDDENTEEALLEWGRARNDEHSLTMEPSDDD-PLEDGGITALSRLSHALGGASVMDRLVPLLGELVEDDRWERRRAAAIALTAIGAGARKEILREVRGVSESVWRPLLRDAHPRVRNVTAASIAQV 199
            TR+AALEL V+L  F G + R+ S + + A+ A V      VDDD         WG     + S + +  DD+ P+       L RLS ALGG  ++ R++ ++G   E   W RRRAA + +  +G G++K +   +  ++  V R    D HPRVR      +AQ+
Sbjct: 2266 TRVAALELAVTLCEFAGGMLRKHSAVVD-ALVAEVCERVTEVDDDAT-------WGSRPTHKTSFSHDEDDDENPVVGFSGQVLDRLSSALGGVQMVPRVLGVIGSWFEHAEWRRRRAACLIIGLVGEGSKKALSPRIDDIARGVARRFA-DPHPRVRFAALVGMAQL 2424          
BLAST of mRNA_M-pyrifera_M_contig90842.21057.1 vs. uniprot
Match: A0A6G0X6P6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X6P6_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.030e-8
Identity = 52/197 (26.40%), Postives = 91/197 (46.19%), Query Frame = 0
Query:    6 PSLFRDCVDDAADVALSLAESEDWMPETRLAALELLVSLASFGGAVARRSSVLAERAVPAAVGLFAGVVDDDENTEEALLEWGRARNDEHSLTMEPSDDDPLEDGGITALSRLSHALGGASVMDRLVPLLGELVEDDR-WERRRAAAIALTAIGAGARKEILREVRGVSESVWRPLLRDAHPRVRNVTAASIAQVAE 201
            P+L    +D      LS+A+S     +TR+ ALE L+S+      + R S VL E  V   + L A + DDD         W    +D+   T        + D G  A+ R++H++GG  ++  ++P L + +++   W++R AA  A+  +  GA++ +  E+      +   L     PRVR+     I  +A+
Sbjct:  239 PNLLLLHLDMFGSAMLSIAQSSVLGNDTRILALECLLSICEHASQLVRSSKVLLEAVVSCVLVLLAEIPDDDN--------WVNQFDDQKDDTGVR-----MTDAGAAAIDRVAHSIGGKVLLPLVLPWLTQYMDEKASWQQRHAALYAIGLMAEGAKEYLYNELDNWFPRIVASLHDPVFPRVRHAALFCIGHLAK 422          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90842.21057.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
F0W5X9_9STRA5.620e-1830.10Importinlike protein putative n=1 Tax=Albugo laiba... [more]
A0A5A8EEB9_CAFRO6.790e-1333.33Uncharacterized protein n=6 Tax=Cafeteria roenberg... [more]
A0A6G0X6P6_9STRA1.030e-826.40Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000357HEAT repeatPFAMPF02985HEATcoord: 131..158
e-value: 0.0031
score: 17.6
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..208
e-value: 3.4E-29
score: 103.5
IPR040122Importin beta familyPANTHERPTHR10527IMPORTIN BETAcoord: 1..205
NoneNo IPR availablePANTHERPTHR10527:SF5KARYOPHERIN (IMPORTIN) BETA 3coord: 1..205
IPR021133HEAT, type 2PROSITEPS50077HEAT_REPEATcoord: 131..168
score: 9.955
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90842contigM-pyrifera_M_contig90842:17..646 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90842.21057.1mRNA_M-pyrifera_M_contig90842.21057.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90842 17..646 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90842.21057.1 ID=prot_M-pyrifera_M_contig90842.21057.1|Name=mRNA_M-pyrifera_M_contig90842.21057.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=210bp
LATNVPSLFRDCVDDAADVALSLAESEDWMPETRLAALELLVSLASFGGA
VARRSSVLAERAVPAAVGLFAGVVDDDENTEEALLEWGRARNDEHSLTME
PSDDDPLEDGGITALSRLSHALGGASVMDRLVPLLGELVEDDRWERRRAA
AIALTAIGAGARKEILREVRGVSESVWRPLLRDAHPRVRNVTAASIAQVA
EVLLPSRTDK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000357HEAT
IPR011989ARM-like
IPR040122Importin_beta
IPR021133HEAT_type_2
IPR016024ARM-type_fold