prot_M-pyrifera_M_contig90841.21056.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90841.21056.1
Unique Nameprot_M-pyrifera_M_contig90841.21056.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length129
Homology
BLAST of mRNA_M-pyrifera_M_contig90841.21056.1 vs. uniprot
Match: UPI000900C6AB (lysine--tRNA ligase, cytoplasmic-like n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI000900C6AB)

HSP 1 Score: 120 bits (301), Expect = 1.470e-32
Identity = 62/125 (49.60%), Postives = 87/125 (69.60%), Query Frame = 0
Query:    6 YREHRLSQLAALEADGINPYPHKFHVELSLPEYCERFSGLKDEEVVEEQVSVAGRIVRIRASSKKLLFIDIEGEDASLQLMLNKAQYE-DKDDFDRLRTILARGDIVGVVGKPTRTRKGELSIVP 129
            Y E+RL  L A +  G+NPYPHKF V +S+PEY E++ GL+  E  ++QVS+AGRI+  RASS KL+F D+  E A +Q+M N  + E  ++ F +L + + RGDIVGVVG   +T++GELSI P
Sbjct:    6 YFENRLKALTAQKEAGVNPYPHKFQVTISIPEYVEKYQGLESGEHRDDQVSIAGRIMTKRASSSKLIFYDLHAEGAKVQVMANARESELGEEGFIKLHSAVKRGDIVGVVGSLGKTKRGELSIFP 130          
BLAST of mRNA_M-pyrifera_M_contig90841.21056.1 vs. uniprot
Match: UPI0009008A32 (lysine--tRNA ligase isoform X1 n=6 Tax=Ipomoea TaxID=4119 RepID=UPI0009008A32)

HSP 1 Score: 124 bits (310), Expect = 1.660e-30
Identity = 65/125 (52.00%), Postives = 87/125 (69.60%), Query Frame = 0
Query:    6 YREHRLSQLAALEADGINPYPHKFHVELSLPEYCERFSGLKDEEVVEEQVSVAGRIVRIRASSKKLLFIDIEGEDASLQLMLNKAQYE-DKDDFDRLRTILARGDIVGVVGKPTRTRKGELSIVP 129
            Y E+RL  L A +  G NPYPHKF V +S+PEY E++ GL+  E  E+QVS+AGRI+  RASS KLLF D+  E A +Q+M N  + E  ++ F +L + + RGDIVGVVG P +T++GELSI P
Sbjct:   28 YFENRLKALTAQKEAGANPYPHKFQVTISIPEYVEKYQGLESGEHREDQVSIAGRIMIKRASSSKLLFYDLHAEGAKVQVMANARESELGEEGFIKLHSAVKRGDIVGVVGSPGKTKRGELSIFP 152          
BLAST of mRNA_M-pyrifera_M_contig90841.21056.1 vs. uniprot
Match: A0A8B6BYL7_MYTGA (Lysyl-tRNA synthetase n=2 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6BYL7_MYTGA)

HSP 1 Score: 117 bits (293), Expect = 1.060e-29
Identity = 57/124 (45.97%), Postives = 81/124 (65.32%), Query Frame = 0
Query:    6 YREHRLSQLAALEADGINPYPHKFHVELSLPEYCERFSGLKDEEVVEEQVSVAGRIVRIRASSKKLLFIDIEGEDASLQLMLNKAQYEDKDDFDRLRTILARGDIVGVVGKPTRTRKGELSIVP 129
            Y + R   +A L+  G NPYPHKFHV++SL  + + +      E  EE+V+VAGR+   R SS KL+F D+  E   +Q+M NK  +E +D FD +   + RGDI+GVVGKP +T++GELSI+P
Sbjct:   55 YFKLRSKSIAQLKEKGQNPYPHKFHVQMSLSTFIDTYDSTPIGETKEEEVTVAGRVHAKRMSSSKLIFYDLRAEGVKIQVMSNKKFFEPEDSFDEINDNIKRGDIIGVVGKPGKTKRGELSIIP 178          
BLAST of mRNA_M-pyrifera_M_contig90841.21056.1 vs. uniprot
Match: A0A6P8YDL4_THRPL (Lysine--tRNA ligase n=2 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8YDL4_THRPL)

HSP 1 Score: 121 bits (304), Expect = 1.310e-29
Identity = 64/124 (51.61%), Postives = 84/124 (67.74%), Query Frame = 0
Query:    6 YREHRLSQLAALEADGINPYPHKFHVELSLPEYCERFSGLKDEEVVEEQVSVAGRIVRIRASSKKLLFIDIEGEDASLQLMLNKAQYEDKDDFDRLRTILARGDIVGVVGKPTRTRKGELSIVP 129
            YR  R   +A L+  G +PYPHKFHV +SL E+ E+++ +KD EVVEE VSVAGRI  IR S  KL+F D+ GE   +Q+M N   YE ++ F      + RGDI+G VGKP +T+KGELSI+P
Sbjct:  112 YRRIRSLAVAKLKESGEHPYPHKFHVSVSLDEFIEKYNHVKDGEVVEETVSVAGRIHAIRDSGAKLVFYDLRGEGKKIQVMANAKLYESEEKFAVDIGKIRRGDIIGCVGKPGKTKKGELSIMP 235          
BLAST of mRNA_M-pyrifera_M_contig90841.21056.1 vs. uniprot
Match: A0A0B7ARN5_9EUPU (Lysine--tRNA ligase (Fragment) n=2 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7ARN5_9EUPU)

HSP 1 Score: 120 bits (302), Expect = 2.210e-29
Identity = 61/124 (49.19%), Postives = 83/124 (66.94%), Query Frame = 0
Query:    6 YREHRLSQLAALEADGINPYPHKFHVELSLPEYCERFSGLKDEEVVEEQVSVAGRIVRIRASSKKLLFIDIEGEDASLQLMLNKAQYEDKDDFDRLRTILARGDIVGVVGKPTRTRKGELSIVP 129
            Y + R   +A+L+  G NPYPHK+HVE+SL E+ E+F  ++   ++E+ V+VAGRI   R S  KL+F D+ GE   +Q+M N   YE  + FD +   L RGDIVGV GKP +T+KGELSIVP
Sbjct:   74 YFKLRSRAVASLKEKGENPYPHKYHVEMSLTEFIEKFENIELGNILEQVVTVAGRIHAKRPSGAKLIFYDLRGESVKIQVMANSKHYESPEAFDEIVDKLRRGDIVGVKGKPGKTKKGELSIVP 197          
BLAST of mRNA_M-pyrifera_M_contig90841.21056.1 vs. uniprot
Match: A0A078IAJ9_BRANA (BnaAnng09520D protein n=1 Tax=Brassica napus TaxID=3708 RepID=A0A078IAJ9_BRANA)

HSP 1 Score: 117 bits (294), Expect = 2.690e-29
Identity = 64/126 (50.79%), Postives = 88/126 (69.84%), Query Frame = 0
Query:    6 YREHRLSQLAALEADGINPYPHKFHVELSLPEYCERFSGLKDEEVVEE-QVSVAGRIVRIRASSKKLLFIDIEGEDASLQLMLNKAQYE-DKDDFDRLRTILARGDIVGVVGKPTRTRKGELSIVP 129
            Y E+RL  LAA +A G NPYPHKF V +S+PEY E++ GL + + VE+ QVS+AGRI+  R+SS KL F D+ GED  +Q+M + ++   D+ +F +L     RGDIVGV G P +T++GELSI P
Sbjct:   81 YFENRLKYLAAEKAKGENPYPHKFAVSMSIPEYIEKYGGLNNGDHVEDAQVSLAGRIMSKRSSSSKLFFYDLHGEDYKVQVMADASKSGLDEAEFSKLHANTKRGDIVGVTGFPGKTKRGELSIFP 206          
BLAST of mRNA_M-pyrifera_M_contig90841.21056.1 vs. uniprot
Match: A0A024G4S7_9STRA (Lysine--tRNA ligase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G4S7_9STRA)

HSP 1 Score: 120 bits (301), Expect = 3.780e-29
Identity = 61/125 (48.80%), Postives = 85/125 (68.00%), Query Frame = 0
Query:    6 YREHRLSQLAALEADGINPYPHKFHVELSLPEYCERFSGLKDEEVVEE-QVSVAGRIVRIRASSKKLLFIDIEGEDASLQLMLNKAQYEDKDDFDRLRTILARGDIVGVVGKPTRTRKGELSIVP 129
            Y  +R   L  +E +GINPYPHKFHV +SLPE+ E+F+GL++   +E   VSVAGR+   RAS  KLLF D+ G+ A +Q+M +   YE    F+++  +L RGDIVG+ G P +++KGELSI P
Sbjct:   86 YFSNREKMLIDMEKEGINPYPHKFHVSISLPEFHEQFNGLENGSHLESTSVSVAGRLHSKRASGSKLLFYDLRGDGAKIQVMSSLEMYESHQSFNKIHQLLRRGDIVGIEGYPGKSKKGELSIFP 210          
BLAST of mRNA_M-pyrifera_M_contig90841.21056.1 vs. uniprot
Match: F2TYB2_SALR5 (Lysine--tRNA ligase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TYB2_SALR5)

HSP 1 Score: 120 bits (301), Expect = 4.200e-29
Identity = 60/125 (48.00%), Postives = 84/125 (67.20%), Query Frame = 0
Query:    6 YREHRLSQLAALEADG-INPYPHKFHVELSLPEYCERFSGLKDEEVVEEQVSVAGRIVRIRASSKKLLFIDIEGEDASLQLMLNKAQYEDKDDFDRLRTILARGDIVGVVGKPTRTRKGELSIVP 129
            Y E R   +  L+ DG + PYPHKFHV +SL E+  ++  L+ E+   E VSVAGRI   RAS K+L+F DI GE   LQ+M   ++++   DF+ +  +L RGD++G+VG PTRT++GELSIVP
Sbjct:   59 YYEMRTKLVQGLKTDGPVQPYPHKFHVSISLTEFHRKYEALEKEQFASETVSVAGRIQLKRASGKRLVFYDIHGEGTKLQVMAEISRHDATPDFETIHGLLRRGDVIGIVGFPTRTKRGELSIVP 183          
BLAST of mRNA_M-pyrifera_M_contig90841.21056.1 vs. uniprot
Match: A0A8J4ZED0_9CHEL (Lysine--tRNA ligase n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4ZED0_9CHEL)

HSP 1 Score: 119 bits (299), Expect = 5.570e-29
Identity = 59/124 (47.58%), Postives = 86/124 (69.35%), Query Frame = 0
Query:    6 YREHRLSQLAALEADGINPYPHKFHVELSLPEYCERFSGLKDEEVVEEQVSVAGRIVRIRASSKKLLFIDIEGEDASLQLMLNKAQYEDKDDFDRLRTILARGDIVGVVGKPTRTRKGELSIVP 129
            Y + R   ++ L+A G NPYPHKFHV +SL E+  ++  LK+EE++EE+V+V+GR+   R S  KL+F D+ GE   LQ+M N   Y+ +++F  + + L RGDI+GV G P RT+KGELSI+P
Sbjct:   55 YFKIRSQAVSDLKACGDNPYPHKFHVSISLSEFLTKYENLKNEEILEEEVTVSGRVHAKRESGAKLIFYDLRGEGVKLQVMANARFYKSEEEFLAVNSKLRRGDIIGVQGLPGRTKKGELSIMP 178          
BLAST of mRNA_M-pyrifera_M_contig90841.21056.1 vs. uniprot
Match: A0A6P6Y9A6_DERPT (Lysine--tRNA ligase n=1 Tax=Dermatophagoides pteronyssinus TaxID=6956 RepID=A0A6P6Y9A6_DERPT)

HSP 1 Score: 119 bits (299), Expect = 6.700e-29
Identity = 59/125 (47.20%), Postives = 82/125 (65.60%), Query Frame = 0
Query:    6 YREHRLSQLAALEADGINPYPHKFHVELSLPEYCERFSGLKDEEVVEE-QVSVAGRIVRIRASSKKLLFIDIEGEDASLQLMLNKAQYEDKDDFDRLRTILARGDIVGVVGKPTRTRKGELSIVP 129
            Y E+R  ++      G NPYPHKFHV +SL ++ E++S L D E+ ++ +VSVAGRI   R S  KL+F D+ GE   +Q+M N   Y D D+F R+   + RGDIVG +G P +T+KGELSI+P
Sbjct:  118 YHENRSKEIIEWRESGENPYPHKFHVSISLNDFIEKYSSLNDGEIRDDVEVSVAGRIYSKRESGSKLIFYDLRGEGTKIQVMANARYYLDDDEFQRINGRIHRGDIVGALGHPCKTKKGELSIMP 242          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90841.21056.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000900C6AB1.470e-3249.60lysine--tRNA ligase, cytoplasmic-like n=1 Tax=Ipom... [more]
UPI0009008A321.660e-3052.00lysine--tRNA ligase isoform X1 n=6 Tax=Ipomoea Tax... [more]
A0A8B6BYL7_MYTGA1.060e-2945.97Lysyl-tRNA synthetase n=2 Tax=Mytilus galloprovinc... [more]
A0A6P8YDL4_THRPL1.310e-2951.61Lysine--tRNA ligase n=2 Tax=Thrips palmi TaxID=161... [more]
A0A0B7ARN5_9EUPU2.210e-2949.19Lysine--tRNA ligase (Fragment) n=2 Tax=Arion vulga... [more]
A0A078IAJ9_BRANA2.690e-2950.79BnaAnng09520D protein n=1 Tax=Brassica napus TaxID... [more]
A0A024G4S7_9STRA3.780e-2948.80Lysine--tRNA ligase n=1 Tax=Albugo candida TaxID=6... [more]
F2TYB2_SALR54.200e-2948.00Lysine--tRNA ligase n=1 Tax=Salpingoeca rosetta (s... [more]
A0A8J4ZED0_9CHEL5.570e-2947.58Lysine--tRNA ligase n=1 Tax=Nymphon striatum TaxID... [more]
A0A6P6Y9A6_DERPT6.700e-2947.20Lysine--tRNA ligase n=1 Tax=Dermatophagoides ptero... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-typePFAMPF01336tRNA_anti-codoncoord: 55..128
e-value: 2.7E-14
score: 52.9
NoneNo IPR availableGENE3D2.40.50.140coord: 1..129
e-value: 1.4E-39
score: 137.3
NoneNo IPR availablePANTHERPTHR42918FAMILY NOT NAMEDcoord: 1..129
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 4..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90841contigM-pyrifera_M_contig90841:131..517 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90841.21056.1mRNA_M-pyrifera_M_contig90841.21056.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90841 131..517 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90841.21056.1 ID=prot_M-pyrifera_M_contig90841.21056.1|Name=mRNA_M-pyrifera_M_contig90841.21056.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=129bp
MTRHGYREHRLSQLAALEADGINPYPHKFHVELSLPEYCERFSGLKDEEV
VEEQVSVAGRIVRIRASSKKLLFIDIEGEDASLQLMLNKAQYEDKDDFDR
LRTILARGDIVGVVGKPTRTRKGELSIVP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004365NA-bd_OB_tRNA
IPR012340NA-bd_OB-fold