prot_M-pyrifera_M_contig90810.21046.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90810.21046.1
Unique Nameprot_M-pyrifera_M_contig90810.21046.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length99
Homology
BLAST of mRNA_M-pyrifera_M_contig90810.21046.1 vs. uniprot
Match: A0A5A8EGR0_CAFRO (RF_PROK_I domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EGR0_CAFRO)

HSP 1 Score: 95.9 bits (237), Expect = 4.750e-23
Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 0
Query:   20 GEDGEYPRVKVPRHDLLVRFCRSPGPGGQNVNKVNTKAEVRFNIHDAAWLPTEVAERLQKKEPGRVSKTGDFIVTSSRTR 99
            G+D E  +++VPR  L + F RS G GGQNVNKVNTKAEVRF+ ++A+WLP +V  RL    P RV+  G+F VTS R R
Sbjct:   21 GDDSEAEKIEVPRGALSLGFSRSSGAGGQNVNKVNTKAEVRFDAYNASWLPPDVRSRLLDANPARVNAKGEFFVTSERHR 100          
BLAST of mRNA_M-pyrifera_M_contig90810.21046.1 vs. uniprot
Match: UPI0018995B77 (peptidyl-tRNA hydrolase ICT1, mitochondrial n=1 Tax=Nematolebias whitei TaxID=451745 RepID=UPI0018995B77)

HSP 1 Score: 96.3 bits (238), Expect = 8.140e-23
Identity = 45/104 (43.27%), Postives = 65/104 (62.50%), Query Frame = 0
Query:    5 HTSVVMLGKRGKG---------EGGEDGEYPRVKVPRHDLLVRFCRSPGPGGQNVNKVNTKAEVRFNIHDAAWLPTEVAERLQKKEPGRVSKTGDFIVTSSRTR 99
            H SVVM+ +  K           G +D E  ++ +P   L V + RS GPGGQ+VNKVNTKAEVRF++H A W+P +V + + +K   R++K G+ +VTS R+R
Sbjct:   29 HGSVVMMRQNNKAFSSRMYYGTRGTDDTEDVQIHIPVERLTVAYSRSSGPGGQHVNKVNTKAEVRFHLHTAHWIPEDVRQNILEKNKNRINKAGELLVTSERSR 132          
BLAST of mRNA_M-pyrifera_M_contig90810.21046.1 vs. uniprot
Match: UPI001ED7FE1B (peptidyl-tRNA hydrolase ICT1, mitochondrial n=1 Tax=Scatophagus argus TaxID=75038 RepID=UPI001ED7FE1B)

HSP 1 Score: 93.6 bits (231), Expect = 8.510e-22
Identity = 42/95 (44.21%), Postives = 61/95 (64.21%), Query Frame = 0
Query:    6 TSVVMLGKRGKGEGGEDGEYP-RVKVPRHDLLVRFCRSPGPGGQNVNKVNTKAEVRFNIHDAAWLPTEVAERLQKKEPGRVSKTGDFIVTSSRTR 99
            T+  +      G  G D E   +V +P   L V +CRS GPGGQ+VNKVNTKAEVRF++H A W+P +V +++ +K   R++K G+ +VTS  +R
Sbjct:   35 TNNTLQSSAAYGSRGTDSEQDDQVHIPVERLTVSYCRSSGPGGQHVNKVNTKAEVRFHVHTADWIPKDVRQKIVEKNRNRINKAGELLVTSELSR 129          
BLAST of mRNA_M-pyrifera_M_contig90810.21046.1 vs. uniprot
Match: UPI001C058F17 (peptidyl-tRNA hydrolase ICT1, mitochondrial n=1 Tax=Melanotaenia boesemani TaxID=1250792 RepID=UPI001C058F17)

HSP 1 Score: 93.2 bits (230), Expect = 1.170e-21
Identity = 46/102 (45.10%), Postives = 65/102 (63.73%), Query Frame = 0
Query:    1 MGRLHTSV---VMLGKRGKGEGGEDGEYPRVKVPRHDLLVRFCRSPGPGGQNVNKVNTKAEVRFNIHDAAWLPTEVAERLQKKEPGRVSKTGDFIVTSSRTR 99
            +GR++ S    V  G R     G D E  +V +P   L V + RS GPGGQ+VNKVNTKAEVRF++H A W+P +V E++ +K   R++K G+ +VTS  +R
Sbjct:   32 VGRIYCSFSSRVCYGTR-----GTDTEDTQVHIPVDRLTVSYSRSSGPGGQHVNKVNTKAEVRFHVHTADWIPEDVREKIFEKNKNRINKAGELLVTSETSR 128          
BLAST of mRNA_M-pyrifera_M_contig90810.21046.1 vs. uniprot
Match: UPI000A2A894A (peptidyl-tRNA hydrolase ICT1, mitochondrial n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A894A)

HSP 1 Score: 91.7 bits (226), Expect = 4.060e-21
Identity = 40/78 (51.28%), Postives = 57/78 (73.08%), Query Frame = 0
Query:   23 GEYPRV-KVPRHDLLVRFCRSPGPGGQNVNKVNTKAEVRFNIHDAAWLPTEVAERLQKKEPGRVSKTGDFIVTSSRTR 99
            G+Y  +  VP+  L ++F RS GPGGQNVNKVNTK E+RF++  A W+P EV E+L K+E  RV+K G+ ++TS++ R
Sbjct:   46 GQYQFLGPVPQDRLTIKFARSSGPGGQNVNKVNTKVEIRFHVESADWIPEEVREKLLKRERNRVNKNGELVLTSTQFR 123          
BLAST of mRNA_M-pyrifera_M_contig90810.21046.1 vs. uniprot
Match: A0A5A8E8I1_CAFRO (RF_PROK_I domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E8I1_CAFRO)

HSP 1 Score: 88.6 bits (218), Expect = 5.910e-21
Identity = 39/73 (53.42%), Postives = 51/73 (69.86%), Query Frame = 0
Query:   20 GEDGEYPRVKVPRHDLLVRFCRSPGPGGQNVNKVNTKAEVRFNIHDAAWLPTEVAERLQKKEPGRVSKTGDFI 92
            G+D E  +++VPR  L + F RS G GGQNVNKVNTKAEVRF+ ++A+WLP +V  RL    P RV+  G+F 
Sbjct:   21 GDDSEAEKIEVPRGALSLGFSRSSGAGGQNVNKVNTKAEVRFDAYNASWLPPDVRSRLLDANPARVNAKGEFF 93          
BLAST of mRNA_M-pyrifera_M_contig90810.21046.1 vs. uniprot
Match: A0A3Q3EDG3_KRYMA (Mitochondrial ribosomal protein L58 n=2 Tax=Kryptolebias marmoratus TaxID=37003 RepID=A0A3Q3EDG3_KRYMA)

HSP 1 Score: 90.9 bits (224), Expect = 8.490e-21
Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 0
Query:    6 TSVVMLGKRGKGEGGEDGEYPRVKVPRHDLLVRFCRSPGPGGQNVNKVNTKAEVRFNIHDAAWLPTEVAERLQKKEPGRVSKTGDFIVTSSRTR 99
            +S +  G RG     +D E  +V +P   L V + RS GPGGQ+VNKVNTKAEVRF++H A W+P +V +++ +K   R++K G+ +VTS  +R
Sbjct:   35 SSRIYYGTRGT----DDTEDTQVHIPVDRLSVSYSRSSGPGGQHVNKVNTKAEVRFHLHTADWIPEDVRQKILEKNRNRINKAGELLVTSEMSR 124          
BLAST of mRNA_M-pyrifera_M_contig90810.21046.1 vs. uniprot
Match: A9V2U5_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V2U5_MONBE)

HSP 1 Score: 92.0 bits (227), Expect = 8.570e-21
Identity = 39/70 (55.71%), Postives = 53/70 (75.71%), Query Frame = 0
Query:   30 VPRHDLLVRFCRSPGPGGQNVNKVNTKAEVRFNIHDAAWLPTEVAERLQKKEPGRVSKTGDFIVTSSRTR 99
            +P   L ++F RS GPGGQNVNKVNTKA+VRF++  A WLPTEV E+LQ+++  R++K G+ +V  S TR
Sbjct:   69 IPSDALQIQFARSSGPGGQNVNKVNTKADVRFHVASAEWLPTEVREKLQEQQQSRINKNGELVVAVSDTR 138          
BLAST of mRNA_M-pyrifera_M_contig90810.21046.1 vs. uniprot
Match: A0A1A8FYK6_9TELE (Immature colon carcinoma transcript 1 n=2 Tax=Nothobranchius korthausae TaxID=1143690 RepID=A0A1A8FYK6_9TELE)

HSP 1 Score: 90.1 bits (222), Expect = 1.690e-20
Identity = 43/98 (43.88%), Postives = 64/98 (65.31%), Query Frame = 0
Query:    3 RLHTSV-VMLGKRGKGEGGEDGEYPRVKVPRHDLLVRFCRSPGPGGQNVNKVNTKAEVRFNIHDAAWLPTEVAERLQKKEPGRVSKTGDFIVTSSRTR 99
            RLH ++    G  G  E  E  +  R++VP   L V + RS GPGGQ+VNKV+TKAEVRF++H A W+P +V +++ +K   R++K G+ +VTS  +R
Sbjct:   34 RLHNNIYTSRGCYGSRERNEKQDS-RIQVPVDRLTVSYSRSSGPGGQHVNKVSTKAEVRFHVHTADWIPQDVRQKILEKNKNRINKAGELLVTSETSR 130          
BLAST of mRNA_M-pyrifera_M_contig90810.21046.1 vs. uniprot
Match: A0A3B5A2X0_9TELE (Mitochondrial ribosomal protein L58 n=1 Tax=Stegastes partitus TaxID=144197 RepID=A0A3B5A2X0_9TELE)

HSP 1 Score: 89.7 bits (221), Expect = 2.740e-20
Identity = 42/93 (45.16%), Postives = 61/93 (65.59%), Query Frame = 0
Query:    7 SVVMLGKRGKGEGGEDGEYPRVKVPRHDLLVRFCRSPGPGGQNVNKVNTKAEVRFNIHDAAWLPTEVAERLQKKEPGRVSKTGDFIVTSSRTR 99
            S V  G RG     +D +  +V +P   L V + RS GPGGQ+VNKVNTKAEVRF++H A W+P +V +++ +K   R++K G+ +VTS  +R
Sbjct:   42 SSVSYGTRGT----DDTQDTQVHIPVERLTVSYSRSGGPGGQHVNKVNTKAEVRFHLHTADWIPEDVRQKIFEKNKNRINKAGELLVTSELSR 130          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90810.21046.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8EGR0_CAFRO4.750e-2355.00RF_PROK_I domain-containing protein n=1 Tax=Cafete... [more]
UPI0018995B778.140e-2343.27peptidyl-tRNA hydrolase ICT1, mitochondrial n=1 Ta... [more]
UPI001ED7FE1B8.510e-2244.21peptidyl-tRNA hydrolase ICT1, mitochondrial n=1 Ta... [more]
UPI001C058F171.170e-2145.10peptidyl-tRNA hydrolase ICT1, mitochondrial n=1 Ta... [more]
UPI000A2A894A4.060e-2151.28peptidyl-tRNA hydrolase ICT1, mitochondrial n=1 Ta... [more]
A0A5A8E8I1_CAFRO5.910e-2153.42RF_PROK_I domain-containing protein n=1 Tax=Cafete... [more]
A0A3Q3EDG3_KRYMA8.490e-2144.68Mitochondrial ribosomal protein L58 n=2 Tax=Krypto... [more]
A9V2U5_MONBE8.570e-2155.71Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A1A8FYK6_9TELE1.690e-2043.88Immature colon carcinoma transcript 1 n=2 Tax=Noth... [more]
A0A3B5A2X0_9TELE2.740e-2045.16Mitochondrial ribosomal protein L58 n=1 Tax=Stegas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.20coord: 25..99
e-value: 5.1E-25
score: 89.8
NoneNo IPR availablePANTHERPTHR11075:SF54PEPTIDYL-TRNA HYDROLASE ICT1, MITOCHONDRIALcoord: 25..99
NoneNo IPR availablePANTHERPTHR11075PEPTIDE CHAIN RELEASE FACTORcoord: 25..99
NoneNo IPR availableSUPERFAMILY110916Peptidyl-tRNA hydrolase domain-likecoord: 16..99
IPR000352Peptide chain release factor class IPFAMPF00472RF-1coord: 28..98
e-value: 4.8E-10
score: 39.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90810contigM-pyrifera_M_contig90810:3..299 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90810.21046.1mRNA_M-pyrifera_M_contig90810.21046.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90810 3..314 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90810.21046.1 ID=prot_M-pyrifera_M_contig90810.21046.1|Name=mRNA_M-pyrifera_M_contig90810.21046.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=99bp
MGRLHTSVVMLGKRGKGEGGEDGEYPRVKVPRHDLLVRFCRSPGPGGQNV
NKVNTKAEVRFNIHDAAWLPTEVAERLQKKEPGRVSKTGDFIVTSSRTR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000352Pep_chain_release_fac_I