prot_M-pyrifera_M_contig908.21044.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig908.21044.1
Unique Nameprot_M-pyrifera_M_contig908.21044.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length173
Homology
BLAST of mRNA_M-pyrifera_M_contig908.21044.1 vs. uniprot
Match: H3GB80_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB80_PHYRM)

HSP 1 Score: 142 bits (358), Expect = 1.750e-39
Identity = 71/182 (39.01%), Postives = 110/182 (60.44%), Query Frame = 0
Query:    1 MASAQASEWQAPMERELASMSKHEVYELVPAPKGRKIVGSMWVCKV----------YTSRFCAQRFSQVAGTDFGSMYAPVCRIPSVRIVSAIAASHNWNVIQLDVKTAFLQSEMKEELYARQPVGFDKLDLNGQPYICKLKKSLYGFRQSPRNWHGTIHHELIAKGFKGCTCDPCIYVTSD 172
            M S+ A +W+   + E  S+ K++ +++VP PKGRK +G  WV +V          + +R  A+ FSQ  G D+   +APV +  S+RIV ++AA +   + Q+DVKTAFL   + E++Y  QP G+  +D +   ++CKLK+SLYG +QSPR W+ TI   ++  GFK C  D C+Y+  D
Sbjct:    9 MESSDAVKWKEACDSECDSLLKNDTWDVVPLPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKNCESDHCVYLKRD 188          
BLAST of mRNA_M-pyrifera_M_contig908.21044.1 vs. uniprot
Match: H3H7D1_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7D1_PHYRM)

HSP 1 Score: 143 bits (360), Expect = 1.890e-39
Identity = 72/182 (39.56%), Postives = 111/182 (60.99%), Query Frame = 0
Query:    1 MASAQASEWQAPMERELASMSKHEVYELVPAPKGRKIVGSMWVCKV----------YTSRFCAQRFSQVAGTDFGSMYAPVCRIPSVRIVSAIAASHNWNVIQLDVKTAFLQSEMKEELYARQPVGFDKLDLNGQPYICKLKKSLYGFRQSPRNWHGTIHHELIAKGFKGCTCDPCIYVTSD 172
            M S+ A++W+   + E  S+ K++ +++VP PKGRK +G  WV +V          + +R  A+ FSQ  G D+   +APV +  S+RIV ++AA +   + Q+DVKTAFL   + E++Y  QP G+  +D +   ++CKLK+SLYG +QSPR W+ TI   ++  GFK C  D CIY+  D
Sbjct:    9 MESSDAAKWKEACDSECDSLLKNDTWDVVPLPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCIYLKRD 188          
BLAST of mRNA_M-pyrifera_M_contig908.21044.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA)

HSP 1 Score: 147 bits (371), Expect = 3.120e-39
Identity = 77/183 (42.08%), Postives = 110/183 (60.11%), Query Frame = 0
Query:    1 MASAQASEWQAPMERELASMSKHEVYELVPAPKGRKIVGSMWVCKV----------YTSRFCAQRFSQVAGTDFGSMYAPVCRIPSVRIVSAIAASHNWNVIQLDVKTAFLQSEMKEELYARQPVGFDKLDLNGQPYICKLKKSLYGFRQSPRNWHGTIHHELIAKGFKGCTCDPCIYVTSDN 173
            M S+ AS+W+   E E  S+ K++ +ELVP P+GRK + S WV KV          Y +R  A+ F Q  G DF   +APV +  S+RI+ +IAA +   + Q+DVKTAFL   ++EE+Y +QP GF  +D     ++CKLK++LYG +QSPR W+ TI   +   GF  C  D C+YV  D+
Sbjct:    1 MESSDASKWKEACESEFESLCKNKTWELVPLPRGRKAISSKWVFKVKETVEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFASIRIILSIAAQYKLVLHQMDVKTAFLNGLLEEEIYMKQPNGF--VDAKYPDHVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDD 181          
BLAST of mRNA_M-pyrifera_M_contig908.21044.1 vs. uniprot
Match: A0A4T9WAI5_9FIRM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Bacteria TaxID=2 RepID=A0A4T9WAI5_9FIRM)

HSP 1 Score: 147 bits (372), Expect = 1.760e-38
Identity = 74/183 (40.44%), Postives = 111/183 (60.66%), Query Frame = 0
Query:    1 MASAQASEWQAPMERELASMSKHEVYELVPAPKGRKIVGSMWVCKV----------YTSRFCAQRFSQVAGTDFGSMYAPVCRIPSVRIVSAIAASHNWNVIQLDVKTAFLQSEMKEELYARQPVGFDKLDLNGQPYICKLKKSLYGFRQSPRNWHGTIHHELIAKGFKGCTCDPCIYVTSDN 173
            M S+ A +W+   + E+ S+ K+E + LVP PKGRK +G  WV +V          + +R  A+ FSQ  G D+   +APV +  S+R++ ++AA +   V Q+DVKTAFL   + E++Y  QP G+  +D +   Y+C+LK+SLYG +QSPR W+ TI   ++  GFK C  D CIY+  DN
Sbjct:   76 MESSDADKWKEACDSEVESLRKNETWTLVPLPKGRKAIGCRWVFRVKENQSGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRVLLSLAAKYKLTVHQMDVKTAFLNGLLDEDIYMAQPDGY--VDGDRPDYVCRLKRSLYGLKQSPRMWNKTIDEFMLKLGFKKCESDHCIYLKRDN 256          
BLAST of mRNA_M-pyrifera_M_contig908.21044.1 vs. uniprot
Match: H3G6E3_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G6E3_PHYRM)

HSP 1 Score: 137 bits (345), Expect = 8.340e-38
Identity = 68/167 (40.72%), Postives = 102/167 (61.08%), Query Frame = 0
Query:   16 ELASMSKHEVYELVPAPKGRKIVGSMWVCKV----------YTSRFCAQRFSQVAGTDFGSMYAPVCRIPSVRIVSAIAASHNWNVIQLDVKTAFLQSEMKEELYARQPVGFDKLDLNGQPYICKLKKSLYGFRQSPRNWHGTIHHELIAKGFKGCTCDPCIYVTSD 172
            E  S+ K++ +++VP PKGRK +G  WV +V          + +R  A+ FSQ  G D+   +APV +  S+RIV ++AA +   + Q+DVKTAFL   + E++Y  QP G+  +D +   ++CKLK+SLYG +QSPR W+ TI   ++  GFK C  D CIY+  D
Sbjct:    6 ECDSLLKNDTWDVVPLPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDLCIYLKRD 170          
BLAST of mRNA_M-pyrifera_M_contig908.21044.1 vs. uniprot
Match: A0A6H5KAG6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAG6_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 1.150e-37
Identity = 77/177 (43.50%), Postives = 113/177 (63.84%), Query Frame = 0
Query:    1 MASAQASEWQAPMERELASMSKHEVYELVPA---PKGRKIVGSMWVCKVYT-----SRFCAQRFSQVAGTDFGSMYAPVCRIPSVRIVSAIAASHNWNVIQLDVKTAFLQSEMKEELYARQPVGFDKLDLN-GQPYICKLKKSLYGFRQSPRNWHGTIHHELIAKGFKGCTCDPCIY 168
            M S Q++EW+  M +ELAS+  H+V +L+P    P G  ++G+ WV +V T     +R   Q ++Q  G D  + +APVC+I S R++ AIAA+  W VI +DV+TAFL  ++ E++Y  Q  GF+K++ + G+P + KLKKSLYG RQSP  W+ TI  +L  KGF     DPC+Y
Sbjct:  651 MNSPQSTEWEQAMLKELASLDDHDVADLIPVSSVPAGCSVIGTRWVYRVKTDGRFKARVVVQGWAQQHGIDCFTTFAPVCKIGSQRLLLAIAAAQGWPVIAMDVQTAFLNGKLSEDVYTYQAPGFEKIESSTGKPLVWKLKKSLYGLRQSPSVWNLTIDKDLRGKGFTPTASDPCVY 827          
BLAST of mRNA_M-pyrifera_M_contig908.21044.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 1.580e-37
Identity = 80/180 (44.44%), Postives = 105/180 (58.33%), Query Frame = 0
Query:    2 ASAQASEWQAPMERELASMSKHEVYELVP---APKGRKIVGSMWVCK-----VYTSRFCAQRFSQVAGTDFGSMYAPVCRIPSVRIVSAIAASHNWNVIQLDVKTAFLQSEMKEELYARQPVGFDKLDLNGQPYICKLKKSLYGFRQSPRNWHGTIHHELIAKGFKGCTCDPCIYVTSDN 173
            AS  A++W A  ERE+ S+S  +VY+LVP    P  RK + S WV K      +  R  AQ ++QV G D GS YAPVCRI SVR+V+ I    N    Q+DV TAFL +++ EE++  QP GF+  D +G   + KL +SLYG  QSP NW  TI   L+  GF     DPC+Y+   N
Sbjct:  940 ASPDATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYTDIHEEVFVEQPPGFEVKDKDGGDMVMKLNRSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHN 1119          
BLAST of mRNA_M-pyrifera_M_contig908.21044.1 vs. uniprot
Match: A0A6G0WH06_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WH06_9STRA)

HSP 1 Score: 145 bits (366), Expect = 3.380e-37
Identity = 69/172 (40.12%), Postives = 104/172 (60.47%), Query Frame = 0
Query:    8 EWQAPMERELASMSKHEVYELVPAPKGRKIVGSMWVCKV----------YTSRFCAQRFSQVAGTDFGSMYAPVCRIPSVRIVSAIAASHNWNVIQLDVKTAFLQSEMKEELYARQPVGFDKLDLNGQPYICKLKKSLYGFRQSPRNWHGTIHHELIAKGFKGCTCDPCIYV 169
            +WQ  M+ E  S++++ V+EL   PKGRK +   W+ KV          + +R C + F Q+AG DF   YAPV R+ S+R++ A+ A+ +   +Q+D+KTAFL   + EE++  QP G+ +   + +  +C LKKSLYG +QSPR WH  +H  L+  GF+ C  D CIYV
Sbjct:  600 QWQQAMDDEYNSLTQNRVWELTELPKGRKALKCKWIWKVKYLANGAVERFKARLCVKGFLQIAGVDFTDTYAPVLRLDSLRVLCAVIATQDLEAVQMDIKTAFLNGNLDEEIFMEQPEGYTQP--HSKHLVCLLKKSLYGLKQSPRQWHKKLHALLVKIGFRQCYKDQCIYV 769          
BLAST of mRNA_M-pyrifera_M_contig908.21044.1 vs. uniprot
Match: H3H8P6_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H8P6_PHYRM)

HSP 1 Score: 138 bits (348), Expect = 5.820e-37
Identity = 70/182 (38.46%), Postives = 108/182 (59.34%), Query Frame = 0
Query:    1 MASAQASEWQAPMERELASMSKHEVYELVPAPKGRKIVGSMWVCKV----------YTSRFCAQRFSQVAGTDFGSMYAPVCRIPSVRIVSAIAASHNWNVIQLDVKTAFLQSEMKEELYARQPVGFDKLDLNGQPYICKLKKSLYGFRQSPRNWHGTIHHELIAKGFKGCTCDPCIYVTSD 172
            M S  A +W+   + E  S+ K++ +++VP PKGRK +G  WV +V          + +R  A+ FSQ    D+   +APV +  S+RIV ++AA +   + Q+DVKTAFL   + E++Y  QP G+  +D +   ++CKLK+SLYG +QSPR W+ TI   ++  GFK C  D C+Y+  D
Sbjct:   31 MESTDAVKWKEACDSECDSLLKNDTWDVVPLPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYDIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD 210          
BLAST of mRNA_M-pyrifera_M_contig908.21044.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT)

HSP 1 Score: 144 bits (362), Expect = 6.730e-37
Identity = 75/182 (41.21%), Postives = 109/182 (59.89%), Query Frame = 0
Query:    1 MASAQASEWQAPMERELASMSKHEVYELVPAPKGRKIVGSMWVCKVYT----------SRFCAQRFSQVAGTDFGSMYAPVCRIPSVRIVSAIAASHNWNVIQLDVKTAFLQSEMKEELYARQPVGFDKLDLNGQPYICKLKKSLYGFRQSPRNWHGTIHHELIAKGFKGCTCDPCIYVTSD 172
            ++S Q ++W   ME+E+ S+  +EV+ LV  P+ RK VGS WV +V T          +R  AQ FSQ  G D+   ++PV R  SVR V A+AA H   + Q+DV TAFL  ++KEE+Y +QP GF  +D   +  +C+L++S+ G +QSPR W+  +  +L   GF   T DPCIYV  +
Sbjct:  137 LSSPQKTKWVKAMEKEMESLKTNEVWNLVELPENRKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGF--IDKGKEHLVCRLRRSICGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYVKEE 316          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig908.21044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H3GB80_PHYRM1.750e-3939.01Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H7D1_PHYRM1.890e-3939.56Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5D6YB57_9STRA3.120e-3942.08Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4T9WAI5_9FIRM1.760e-3840.44Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3G6E3_PHYRM8.340e-3840.72Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KAG6_9PHAE1.150e-3743.50Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JYB5_9PHAE1.580e-3744.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6G0WH06_9STRA3.380e-3740.12Integrase catalytic domain-containing protein n=1 ... [more]
H3H8P6_PHYRM5.820e-3738.46Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6S7JEY7_PARCT6.730e-3741.21Reverse transcriptase Ty1/copia-type domain-contai... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 24..171
e-value: 1.2E-37
score: 129.9
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 7..148
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 7..148
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 75..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig908contigM-pyrifera_M_contig908:17619..18137 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig908.21044.1mRNA_M-pyrifera_M_contig908.21044.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig908 17619..18140 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig908.21044.1 ID=prot_M-pyrifera_M_contig908.21044.1|Name=mRNA_M-pyrifera_M_contig908.21044.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=173bp
MASAQASEWQAPMERELASMSKHEVYELVPAPKGRKIVGSMWVCKVYTSR
FCAQRFSQVAGTDFGSMYAPVCRIPSVRIVSAIAASHNWNVIQLDVKTAF
LQSEMKEELYARQPVGFDKLDLNGQPYICKLKKSLYGFRQSPRNWHGTIH
HELIAKGFKGCTCDPCIYVTSDN
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like