prot_M-pyrifera_M_contig90765.21038.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90765.21038.1
Unique Nameprot_M-pyrifera_M_contig90765.21038.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length171
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig90765.21038.1 vs. uniprot
Match: A0A2E1KKX6_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E1KKX6_9PLAN)

HSP 1 Score: 53.1 bits (126), Expect = 5.010e-5
Identity = 32/107 (29.91%), Postives = 48/107 (44.86%), Query Frame = 0 
Query:   14 LGGELWHYGGAS---HQNAQARLVYGFIPWIVRADASLIWANYKGDLRGNGWTLHYAMPLDPDGRKHR-------DTRGPVIPSVRAVAVREGIDDRKYIETLRYYA 110
            LG  LW YG      +  A  R  +G   W      + +W    G  RG  W+      +D    +H+       +  G +IP+ R  A+REGIDD +Y+ TL+ +A
Sbjct:  808 LGKXLWSYGXXXXXXYTTADLRHYFGRYLWKSGLKGASLWCYNHGRFRGRFWSYIDRTQVDFSPTEHKLMFSYVWEEDGEIIPTARWEAIREGIDDYRYLRTLKQFA 914
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90765.21038.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2E1KKX6_9PLAN5.010e-529.91Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90765contigM-pyrifera_M_contig90765:212..724 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90765.21038.1mRNA_M-pyrifera_M_contig90765.21038.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90765 212..724 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90765.21038.1 ID=prot_M-pyrifera_M_contig90765.21038.1|Name=mRNA_M-pyrifera_M_contig90765.21038.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=171bp
NTLSPAAARLQHRLGGELWHYGGASHQNAQARLVYGFIPWIVRADASLIW
ANYKGDLRGNGWTLHYAMPLDPDGRKHRDTRGPVIPSVRAVAVREGIDDR
KYIETLRYYATRYRSESDLRYLDTLSRAARRLLLSIKGVGGLDNVEAAVA
RGAGMIQLRGELRERIVRLLA
back to top