prot_M-pyrifera_M_contig90584.21006.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90584.21006.1
Unique Nameprot_M-pyrifera_M_contig90584.21006.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length105
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90584.21006.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..105
e-value: 4.7E-16
score: 60.3
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 78..101
e-value: 1.6
score: 9.0
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 6..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90584contigM-pyrifera_M_contig90584:410..724 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90584.21006.1mRNA_M-pyrifera_M_contig90584.21006.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90584 410..724 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90584.21006.1 ID=prot_M-pyrifera_M_contig90584.21006.1|Name=mRNA_M-pyrifera_M_contig90584.21006.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=105bp
MSHVRGLTGERLWSLAGSLRVLSCGLRKVDFSYARLGAAGAELLEAALGG
APLLEEVHVAGCNLDAADAHHLATLLQSCPSLHTLNAAFNDLRAPGAAVL
AQTIL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt