prot_M-pyrifera_M_contig90556.20998.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90556.20998.1
Unique Nameprot_M-pyrifera_M_contig90556.20998.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length73
Homology
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BLAST of mRNA_M-pyrifera_M_contig90556.20998.1 vs. uniprot
Match: A0A6H5J803_9PHAE (Conserved oligomeric Golgi complex subunit 4 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J803_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 1.230e-17
Identity = 43/45 (95.56%), Postives = 43/45 (95.56%), Query Frame = 0 
Query:   13 AQIEDGHGMAEHVSRSVRRLDAIQMRVQRALALVEDVINLRGCAE 57
            AQIEDGHGMAE VSRSVRRLD IQMRVQRALALVEDVINLRGCAE
Sbjct:  133 AQIEDGHGMAERVSRSVRRLDDIQMRVQRALALVEDVINLRGCAE 177
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BLAST of mRNA_M-pyrifera_M_contig90556.20998.1 vs. uniprot
Match: A0A7S2WIB6_9STRA (Conserved oligomeric Golgi complex subunit 4 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WIB6_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 3.100e-9
Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 0 
Query:    6 GDVVVFQAQIEDGHGMAEHVSRSVRRLDAIQMRVQRALALVEDVINLRGCAE 57
            G+  +   QIE+   ++E VSR++RRLD  QM VQ ALALVED++NL+ CA+
Sbjct:   67 GEAAMLAEQIEESRVLSERVSRTIRRLDRAQMNVQHALALVEDIVNLKDCAQ 118
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BLAST of mRNA_M-pyrifera_M_contig90556.20998.1 vs. uniprot
Match: A0A4D9D1B9_9STRA (Conserved oligomeric Golgi complex subunit 4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1B9_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 5.680e-6
Identity = 25/37 (67.57%), Postives = 30/37 (81.08%), Query Frame = 0 
Query:   21 MAEHVSRSVRRLDAIQMRVQRALALVEDVINLRGCAE 57
            +AE +S SVR LD  QMRVQR LA+VED+INL+ CAE
Sbjct:  156 LAEKMSSSVRELDERQMRVQRVLAMVEDIINLKTCAE 192
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BLAST of mRNA_M-pyrifera_M_contig90556.20998.1 vs. uniprot
Match: I2CQF7_NANGC (Oligomeric golgi complex component (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQF7_NANGC)

HSP 1 Score: 48.1 bits (113), Expect = 1.950e-5
Identity = 23/33 (69.70%), Postives = 27/33 (81.82%), Query Frame = 0 
Query:   25 VSRSVRRLDAIQMRVQRALALVEDVINLRGCAE 57
            +S SVR LD  QMRVQR LA+VED+INL+ CAE
Sbjct:    1 MSSSVRELDERQMRVQRVLAMVEDIINLKTCAE 33
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90556.20998.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5J803_9PHAE1.230e-1795.56Conserved oligomeric Golgi complex subunit 4 n=2 T... [more]
A0A7S2WIB6_9STRA3.100e-951.92Conserved oligomeric Golgi complex subunit 4 n=1 T... [more]
A0A4D9D1B9_9STRA5.680e-667.57Conserved oligomeric Golgi complex subunit 4 n=2 T... [more]
I2CQF7_NANGC1.950e-569.70Oligomeric golgi complex component (Fragment) n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90556contigM-pyrifera_M_contig90556:471..689 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90556.20998.1mRNA_M-pyrifera_M_contig90556.20998.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90556 471..689 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90556.20998.1 ID=prot_M-pyrifera_M_contig90556.20998.1|Name=mRNA_M-pyrifera_M_contig90556.20998.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=73bp
MDGALGDVVVFQAQIEDGHGMAEHVSRSVRRLDAIQMRVQRALALVEDVI
NLRGCAEVGRREGRGGRWGGGG*
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