prot_M-pyrifera_M_contig90528.20990.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90528.20990.1
Unique Nameprot_M-pyrifera_M_contig90528.20990.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length107
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90528.20990.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 78..101
e-value: 0.053
score: 22.7
coord: 55..77
e-value: 7.6
score: 14.3
coord: 1..24
e-value: 50.0
score: 7.1
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 78..106
score: 9.91
NoneNo IPR availablePFAMPF13909zf-H2C2_5coord: 78..103
e-value: 6.9E-8
score: 32.1
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 56..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90528contigM-pyrifera_M_contig90528:182..502 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90528.20990.1mRNA_M-pyrifera_M_contig90528.20990.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90528 182..502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90528.20990.1 ID=prot_M-pyrifera_M_contig90528.20990.1|Name=mRNA_M-pyrifera_M_contig90528.20990.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp
FSCEDRGLTAKTKTALKEHRIGVHDCTKGGCPLCRQVPILDIGRYFSDFR
ALPRPLCPHCGRTCAGPVALRFHSGRHFSCDQCSFVTMRASDLKKHFSNI
HEGRRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf