prot_M-pyrifera_M_contig8818.20480.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8818.20480.1
Unique Nameprot_M-pyrifera_M_contig8818.20480.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length257
Homology
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BLAST of mRNA_M-pyrifera_M_contig8818.20480.1 vs. uniprot
Match: D8LL68_ECTSI (Rab geranylgeranyl transferase component A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL68_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 2.630e-83
Identity = 149/268 (55.60%), Postives = 176/268 (65.67%), Query Frame = 0 
Query:    1 LSPVVLHQDFVSVEGTGGAVWRPSVQFAKFVCSEEGRRCLPLEGKSLLEVSSGLGLGAIVAWHLGASSVVATDIVSENGPMALLARNVSANCVRTASSTNRTEP---RQDRGLGEEKDKXXXXXXXXXXXXXXXXPWTAGRSSPPAGV--------------CVQELRWGDGAQLAGALAKFGGCGPDIVLACDVVFDEALLPALTETLVGACTLRTRCGELPRLCFSLQKRNRSRESLFFAGLARRLGGGS-WREVHREGDVSVLLF 250
            L PVVL+QDFVSVEGTGGAVWRPS++F++FVCSEEGRRCLPL GKS+LE+SSGLGLGAIV+W+LGAS VVATD+ S++GPM LLARNVS NC   A +T +  P    +D   G E                       GRS+   G                VQ LRWGD AQLA AL KF G GPD++LACDVVFD+ALLP L ETL  A    TR G  P LC S QKRNR RE  FFA LA+R+GGG  +R +H++ D+SV +F
Sbjct:   41 LPPVVLNQDFVSVEGTGGAVWRPSIEFSEFVCSEEGRRCLPLAGKSVLEISSGLGLGAIVSWNLGASPVVATDLGSKDGPMTLLARNVSENCGPRAVATPQPSPGRTSRDHSRGGEAGTS-----------------AKGRSAEDEGTPXXXXXXXXXXXXXSVQSLRWGDKAQLADALKKFDGFGPDVLLACDVVFDDALLPPLLETLAEAACRTTRGGGRPSLCVSHQKRNRRREDNFFASLAKRIGGGGQFRMLHQQNDLSVFVF 291
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BLAST of mRNA_M-pyrifera_M_contig8818.20480.1 vs. uniprot
Match: A0A835YQC3_9STRA (Rab geranylgeranyl transferase component A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQC3_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.240e-17
Identity = 47/91 (51.65%), Postives = 62/91 (68.13%), Query Frame = 0 
Query:    3 PVVLHQDFVSVEGTGGAVWRPSVQFAKFVCSEEGRRCLPLEGKSLLEVSSGLGLGAIVAWHLGASSVVATDIVSE-NGPMALLARNVSANC 92
            P+ + QDF+ +EGTGG VWR SV  A++ C+        + G  +LE+ +GLGL AI AWHLGA  VVATDI  + N  +ALLA+N+SANC
Sbjct:   53 PLTIIQDFMGIEGTGGTVWRASVMLAEYCCTHLKDA---MAGAPVLEIGAGLGLVAIAAWHLGALQVVATDIDHDGNRLLALLAKNISANC 140
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8818.20480.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LL68_ECTSI2.630e-8355.60Rab geranylgeranyl transferase component A n=2 Tax... [more]
A0A835YQC3_9STRA1.240e-1751.65Rab geranylgeranyl transferase component A n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 110..132
NoneNo IPR availableGENE3D3.40.50.150coord: 2..255
e-value: 3.8E-28
score: 100.4
NoneNo IPR availablePANTHERPTHR14614HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGENcoord: 14..242
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 37..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8818contigM-pyrifera_M_contig8818:4066..7247 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8818.20480.1mRNA_M-pyrifera_M_contig8818.20480.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8818 4066..7247 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8818.20480.1 ID=prot_M-pyrifera_M_contig8818.20480.1|Name=mRNA_M-pyrifera_M_contig8818.20480.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=257bp
LSPVVLHQDFVSVEGTGGAVWRPSVQFAKFVCSEEGRRCLPLEGKSLLEV
SSGLGLGAIVAWHLGASSVVATDIVSENGPMALLARNVSANCVRTASSTN
RTEPRQDRGLGEEKDKEEETEEEEEEDEEEEEPWTAGRSSPPAGVCVQEL
RWGDGAQLAGALAKFGGCGPDIVLACDVVFDEALLPALTETLVGACTLRT
RCGELPRLCFSLQKRNRSRESLFFAGLARRLGGGSWREVHREGDVSVLLF
AAAADQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases