prot_M-pyrifera_M_contig88164.20477.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig88164.20477.1
Unique Nameprot_M-pyrifera_M_contig88164.20477.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length45
Homology
BLAST of mRNA_M-pyrifera_M_contig88164.20477.1 vs. uniprot
Match: D8LFV7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFV7_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 2.890e-16
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 0
Query:    1 MEFEHTSVALDLRFIPDGVSFAERTVRDRSSSVPSSYRPPSFICK 45
            MEFEH+SVALDLRFIPD VSF  R VRD+SSSVPSSY+PPSFICK
Sbjct:  454 MEFEHSSVALDLRFIPDEVSFEGRQVRDKSSSVPSSYQPPSFICK 498          
BLAST of mRNA_M-pyrifera_M_contig88164.20477.1 vs. uniprot
Match: A0A8J9RAM1_9CHLO (Probable pre-rRNA-processing protein ESF1 at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RAM1_9CHLO)

HSP 1 Score: 51.2 bits (121), Expect = 3.200e-6
Identity = 22/43 (51.16%), Postives = 30/43 (69.77%), Query Frame = 0
Query:    1 MEFEHTSVALDLRFIPDGVSFAERTVRDRSSSVPSSYRPPSFI 43
            +EFE T   LD+RF+PD +SF +R VRD ++ VP+ Y PP F 
Sbjct:  361 LEFELTGNKLDVRFVPDVLSFEDRQVRDSATDVPADYEPPPFF 403          
BLAST of mRNA_M-pyrifera_M_contig88164.20477.1 vs. uniprot
Match: UPI001D049B9A (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001D049B9A)

HSP 1 Score: 50.8 bits (120), Expect = 4.370e-6
Identity = 22/38 (57.89%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    2 EFEHTSVALDLRFIPDGVSFAERTVRDRSSSVPSSYRP 39
            EFE TSV LDLRFIPD +SF +R V+++ +S+P+ Y P
Sbjct:  413 EFESTSVVLDLRFIPDDISFEKRQVKNQCTSMPADYTP 450          
BLAST of mRNA_M-pyrifera_M_contig88164.20477.1 vs. uniprot
Match: A0A1Y1I6T7_KLENI (NUC153 domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I6T7_KLENI)

HSP 1 Score: 50.8 bits (120), Expect = 4.370e-6
Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    1 MEFEHTSVALDLRFIPDGVSFAERTVRDRSSSVPSSYRPPSF 42
            +EFE +S  LDLRF+PD +SF ER  RD +++VPS Y  P F
Sbjct:  350 LEFEKSSNKLDLRFVPDAMSFDERPKRDTATAVPSDYAAPDF 391          
BLAST of mRNA_M-pyrifera_M_contig88164.20477.1 vs. uniprot
Match: A0A7S3LT15_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LT15_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 5.980e-6
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    1 MEFEHTSVALDLRFIPDGVSFAERTVRDRSSSVPSSYRPPSFICK 45
            MEFEH+SV  D+RF+PD V   +R VRD ++ V   Y+PP FI +
Sbjct:  189 MEFEHSSVLFDMRFVPDEVEM-DRPVRDSANEVGDDYQPPEFITR 232          
BLAST of mRNA_M-pyrifera_M_contig88164.20477.1 vs. uniprot
Match: A0A6A5CCI8_NAEFO (NUC153 domain-containing protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5CCI8_NAEFO)

HSP 1 Score: 50.1 bits (118), Expect = 8.180e-6
Identity = 21/38 (55.26%), Postives = 29/38 (76.32%), Query Frame = 0
Query:    2 EFEHTSVALDLRFIPDGVSFAERTVRDRSSSVPSSYRP 39
            EFE TSV LDLRFIPD +SF  R ++++ +S+P+ Y P
Sbjct:  418 EFESTSVVLDLRFIPDDISFENREIKNQCTSMPADYTP 455          
BLAST of mRNA_M-pyrifera_M_contig88164.20477.1 vs. uniprot
Match: A0A7S3SGF1_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SGF1_EMIHU)

HSP 1 Score: 48.5 bits (114), Expect = 2.870e-5
Identity = 23/41 (56.10%), Postives = 33/41 (80.49%), Query Frame = 0
Query:    2 EFEHTSVALDLRFIPDGVSFAERTVRDRSSSVPSSYRPPSF 42
            EFE+++++LDLRFIPD +SF ERT RD ++++P  Y  PSF
Sbjct:  288 EFEYSAMSLDLRFIPDEMSF-ERTPRDAATTLPPRYSAPSF 327          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88164.20477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LFV7_ECTSI2.890e-1684.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8J9RAM1_9CHLO3.200e-651.16Probable pre-rRNA-processing protein ESF1 at N-ter... [more]
UPI001D049B9A4.370e-657.89uncharacterized protein n=1 Tax=Naegleria lovanien... [more]
A0A1Y1I6T7_KLENI4.370e-654.76NUC153 domain-containing protein n=1 Tax=Klebsormi... [more]
A0A7S3LT15_9STRA5.980e-651.11Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A6A5CCI8_NAEFO8.180e-655.26NUC153 domain-containing protein n=1 Tax=Naegleria... [more]
A0A7S3SGF1_EMIHU2.870e-556.10Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88164contigM-pyrifera_M_contig88164:520..654 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88164.20477.1mRNA_M-pyrifera_M_contig88164.20477.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig88164 520..669 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig88164.20477.1 ID=prot_M-pyrifera_M_contig88164.20477.1|Name=mRNA_M-pyrifera_M_contig88164.20477.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=45bp
MEFEHTSVALDLRFIPDGVSFAERTVRDRSSSVPSSYRPPSFICK
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