prot_M-pyrifera_M_contig88099.20465.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig88099.20465.1
Unique Nameprot_M-pyrifera_M_contig88099.20465.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length116
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88099.20465.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000198Rho GTPase-activating protein domainPFAMPF00620RhoGAPcoord: 26..111
e-value: 3.5E-9
score: 36.7
IPR000198Rho GTPase-activating protein domainPROSITEPS50238RHOGAPcoord: 1..116
score: 11.617
IPR008936Rho GTPase activation proteinGENE3D1.10.555.10coord: 5..114
e-value: 2.9E-13
score: 51.4
IPR008936Rho GTPase activation proteinSUPERFAMILY48350GTPase activation domain, GAPcoord: 27..113
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..116
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88099contigM-pyrifera_M_contig88099:318..665 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88099.20465.1mRNA_M-pyrifera_M_contig88099.20465.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig88099 318..665 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig88099.20465.1 ID=prot_M-pyrifera_M_contig88099.20465.1|Name=mRNA_M-pyrifera_M_contig88099.20465.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=116bp
MCAHIWRRMVRCAKATASFLTLTALAALTSVGLFREAGSLSETLALKRKF
ASGALGYTMLARPHANQGAAKGKVSLSNSSKHSIASLLSHYLLDLEPPLL
TYSLYDAWIGCMGTLH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000198RhoGAP_dom
IPR008936Rho_GTPase_activation_prot