prot_M-pyrifera_M_contig88042.20455.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig88042.20455.1
Unique Nameprot_M-pyrifera_M_contig88042.20455.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length228
Homology
BLAST of mRNA_M-pyrifera_M_contig88042.20455.1 vs. uniprot
Match: A0A7X5WTS2_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WTS2_9ACTN)

HSP 1 Score: 218 bits (556), Expect = 3.130e-67
Identity = 128/234 (54.70%), Postives = 150/234 (64.10%), Query Frame = 0
Query:    1 VPGSDRDRWLGLRQSHNDGWEATVDGVSLGAPVLIDGFANGWRLPAGADVEVLLEWTPQRLVGRTLWLSA---LVVVIALGLAIRRSAPGRVRSPLRSDGPATPTLRALPVLDVATRSPAASWAT------AMVGASAVGVFAWANLPRLPGLALVIAALTLAGLRAGVAWLRPALLAALTLGLTAVAIMIAQRRFRYPPDFTWPEQFADLHVWGVLALLLLASDYVVSALRPD 225
            VPGS  DRWL L QSHNDGWEAT+ G SLG PV+IDGFANGW LPAG DV V L WTPQRLV R + LSA   LVV +A     R S P +V  P   DGPA P    LP+LD   R P AS          + G     VFA+ NL + P   L + A+ +  L  G  W RPAL A+L LG+TA+AIM+ QRRFR+PPDF WP+QF D+HV GVL LLLL +DYV SA+ P+
Sbjct:   82 VPGSTDDRWLVLGQSHNDGWEATIGGRSLGPPVVIDGFANGWLLPAGGDVAVALRWTPQRLVDRAMVLSAIALLVVAVAAARGRRDSGPSQVYRP---DGPAWPAPARLPLLD---RRPDASSGLPVAAPRVVAGGVVAAVFAFLNLAQWPLAPLAVGAMAILALARGRWWSRPALSASLLLGITALAIMVEQRRFRHPPDFVWPQQFEDVHVLGVLVLLLLFADYVRSAVAPE 309          
BLAST of mRNA_M-pyrifera_M_contig88042.20455.1 vs. uniprot
Match: A0A7K1Z8T9_9ACTN (DUF3367 domain-containing protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z8T9_9ACTN)

HSP 1 Score: 201 bits (511), Expect = 1.010e-55
Identity = 123/228 (53.95%), Postives = 149/228 (65.35%), Query Frame = 0
Query:    1 VPGSDRDRWLGLRQSHNDGWEATVDGVSLGAPVLIDGFANGWRLPAGADVEVLLEWTPQRLVGRTLWLSALVVVIALGLAIRRSAPGRVRSPLRS-DGPATPTLRALPVLDVATRS---PAASWATAMVGASAVGVFAWANLPRLPGLALVIAALTLAGLRAGVAWLRPALLAALTLGLTAVAIMIAQRRFRYPPDFTWPEQFADLHVWGVLALLLLASDYVVSALRP 224
            V  S +DRWL L QS+NDGW A+VDGV LGAPVLIDGFANGWRLPAG D  V L WTPQRLV   LWLS L V++   LA+R S PG   S +R  DGP  P L   P +  +T S   P  S     +G++    FA  NLP+    A+ +AA+   G+     W RPAL AAL LGL A++IMI QRRFR+PPDF WP+QF ++H+  VLALLLL +DY+ SA RP
Sbjct: 1217 VKASTQDRWLVLGQSYNDGWSASVDGVDLGAPVLIDGFANGWRLPAGDDRVVELRWTPQRLVDWALWLSVLAVLMVGFLAVR-SVPGPDTSVVRRRDGPDLPLLD--PAVGGSTDSRLVPPRSGRHVGIGSALAFGFALVNLPQWHLAAVAVAAIAALGVWRPRWWNRPALYAALLLGLAALSIMIEQRRFRHPPDFVWPQQFENVHILAVLALLLLFADYLRSAQRP 1441          
BLAST of mRNA_M-pyrifera_M_contig88042.20455.1 vs. uniprot
Match: A0A358A311_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A311_9ACTN)

HSP 1 Score: 169 bits (427), Expect = 4.130e-46
Identity = 108/226 (47.79%), Postives = 136/226 (60.18%), Query Frame = 0
Query:    1 VPGSDRDRWLGLRQSHNDGWEATVDGVSLGAPVLIDGFANGWRLPA-GADVEVLLEWTPQRLVGRTLWLSALVVVIALGLAIRRSAPGRVRSPLRSDGPATPTLRALPVLDVATRSPAASWATAMVGASAVGVFAWANLPRLPGLALVIAALTLAGLRAGVAWLRPALLAALTLGLTAVAIMIAQRRFRYPPDFTWPEQFADLHVWGVLALLLLASDYVVSALRPD 225
            +P  D  RWL L QSHN GW AT++GVSLG+P L+DGFANGW +PA G  V+  L WTPQ+LV R L  SA+ V+  L LA+R SAP     P+     A PT      ++   R    S A+A++ A   G+FA  NLP  P  AL IA +   G+        PA LAA+   +T+  IMI Q   R+PPDF WPEQFA+ HV GVL +LLLA +YV SA+ PD
Sbjct:  283 IPTGDAGRWLVLGQSHNLGWTATLNGVSLGSPTLVDGFANGWAVPATGGTVD--LVWTPQQLVDRALVFSAVAVLAILVLAVR-SAP----MPVGHTNVAKPTF-----IEPPRRGARRSRASAVLAAVGTGLFALVNLPSWPLAALAIAGVATFGVARREGARLPAALAAVLFAITSTLIMIEQVLERHPPDFGWPEQFAEFHVLGVLTILLLAVEYVRSAMAPD 496          
BLAST of mRNA_M-pyrifera_M_contig88042.20455.1 vs. uniprot
Match: A0A6B1EFH7_9ACTN (DUF3367 domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EFH7_9ACTN)

HSP 1 Score: 168 bits (426), Expect = 2.540e-44
Identity = 105/221 (47.51%), Postives = 128/221 (57.92%), Query Frame = 0
Query:    1 VPGSDRDRWLGLRQSHNDGWEATVDGVSLGAPVLIDGFANGWRLPAGADVEVLLEWTPQRLVGRTLWLSALVVVIALGLAIR-RSAPGRVRSPLRSDGPATPTLRALPVLDVATRSPAASWATAMVGASAVGVFAWANLPRLPGLALVIAALTLAGLRAGVAWLRPALLAALTLGLTAVAIMIAQRRFRYPPDFTWPEQFADLHVWGVLALLLLASDYVVS 220
            VPG D DRWL L QSHN GWEAT+DG  LG PV+IDGFANGW LPAGAD  V L WTPQRLV   L LS L V  A  +A R R   G  RS L    P  P LR       A   P+ S A A V        A A++P    +AL+   +T+  LR    W  P + AA++LG+  + ++I Q R RYPPDF WP +F  +H+ G+ A+L LA DY V+
Sbjct: 1229 VPGRDTDRWLVLGQSHNRGWEATIDGADLGPPVVIDGFANGWLLPAGADAVVELRWTPQRLVDWALRLSVLAVAAAALIAWRGRPDRGPPRSALARTEPERPVLRW--PWHQAEMHPS-STAAATVXXXXXXXLAAASVPDWHAMALLAGVVTVLALRHRRLWWLPPMTAAVSLGIALLFVLIQQYRLRYPPDFIWPFRFESVHILGMAAILALACDYAVT 1446          
BLAST of mRNA_M-pyrifera_M_contig88042.20455.1 vs. uniprot
Match: A0A2E8LGF0_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LGF0_9ACTN)

HSP 1 Score: 163 bits (413), Expect = 1.400e-42
Identity = 103/226 (45.58%), Postives = 130/226 (57.52%), Query Frame = 0
Query:    1 VPGSDRDRWLGLRQSHNDGWEATVDGVSLGAPVLIDGFANGWRLPA-GADVEVLLEWTPQRLVGRTLWLSALVVVIALGLAIRRSAPGRVRSPLRSDGPATPTLRALPVLDVATRSPAASWATAMVGASAVGVFAWANLPRLPGLALVIAALTLAGLRAGVAWLRPALLAALTLGLTAVAIMIAQRRFRYPPDFTWPEQFADLHVWGVLALLLLASDYVVSALRPD 225
            +P  D  RWL L QSHN GW AT+DGVSLG P L+DGFANGW +PA G  VE  L WTPQ+++ R L  S   V++ L LA+R +      SP    G A PT      +D   R    S  +A+  A   G+FA  NLP  P  ALVIA +   G+        PA LAA    +T++ IM+ Q   R+PPDF WP+QF + HV GV  +LLLA +YV SA+ PD
Sbjct: 1202 IPQDDASRWLVLGQSHNLGWTATLDGVSLGPPTLVDGFANGWAVPASGGTVE--LVWTPQQIIDRALVFSVFAVLMILVLAVRPAL-----SPTGRTGAAMPTF-----IDRPRRGARRSRRSAVFAAVGTGLFALVNLPSWPLGALVIAGVAACGVLRREGARLPAALAACLFAVTSLLIMVEQVFERHPPDFGWPKQFGEFHVLGVTTILLLAVEYVRSAMAPD 1415          
BLAST of mRNA_M-pyrifera_M_contig88042.20455.1 vs. uniprot
Match: A0A2D8GIV0_9ACTN (Uncharacterized protein n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GIV0_9ACTN)

HSP 1 Score: 162 bits (410), Expect = 3.530e-42
Identity = 106/229 (46.29%), Postives = 134/229 (58.52%), Query Frame = 0
Query:    1 VPGSDRDRWLGLRQSHNDGWEATVDGVSLGAPVLIDGFANGWRLPA-GADVEVLLEWTPQRLVGRTLWLSALVVVIALGLAIRRSAP---GRVRSPLRSDGPATPTLRALPVLDVATRSPAASWATAMVGASAVGVFAWANLPRLPGLALVIAALTLAGLRAGVAWLRPALLAALTLGLTAVAIMIAQRRFRYPPDFTWPEQFADLHVWGVLALLLLASDYVVSALRPD 225
            +P  D  RWL L QSHN GW A +DGVSLG P L+DGFANGW +PA G  VE  L W PQ+LV R L LSA+ V++ L LA R  AP   GR+ +       A PT      ++   R    S  +A+V A   G+FA  NLP  P  AL +A +   G+        PA LAA    +T++ IMI Q   R+PPDF WP+QFA+ HV GVL +LLLA +Y+ SA+ PD
Sbjct: 1200 IPTGDAGRWLVLGQSHNRGWAANLDGVSLGPPTLVDGFANGWVVPASGGTVE--LVWAPQKLVDRALVLSAIAVLVILVLAAR-PAPLPVGRITA-------AMPTF-----IEPPRRGTRRSRRSAVVAAVGTGLFALVNLPSWPVAALALAGVAAFGVTRREGARLPAALAAGLFAITSLLIMIEQVLERHPPDFVWPKQFAEFHVLGVLTILLLAVEYLRSAMAPD 1413          
BLAST of mRNA_M-pyrifera_M_contig88042.20455.1 vs. uniprot
Match: A0A7Y2GKN9_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GKN9_9ACTN)

HSP 1 Score: 130 bits (327), Expect = 1.960e-31
Identity = 98/236 (41.53%), Postives = 124/236 (52.54%), Query Frame = 0
Query:    9 WLGLRQSHNDGWEATVDGVS-LGAPVLIDGFANGWRLPA---GADVEVLLEWTPQRLVGRTLWLSAL-----VVVIALGLAIRRSAPGRVRSPLRSDGPATPTLRALPVLDVATRSPA-----ASWATAMVGASAVGVFAWANLPRLPGLALVIAALTLAGLRAGVAWLRPALLAALTLGLTAVA---IMIAQRRFRYPPDFTWPEQFADLHVWGVLALLLLASDYVVSALRPDAH 227
            WL L QSHN GW+AT+DG+  LG P+LIDGFANGW +     G+   V L WTPQR+V   LW S L     V +IALG   RR               ATPT  A+    +   +PA     + W   ++  +A G FA  NLPR   LALV+ A +    R       P +L  L      VA     I Q R RYPPDF WP+ F  +HV GVL +LLLA++ V + +RPDA+
Sbjct:  340 WLVLGQSHNPGWQATIDGLGDLGEPMLIDGFANGWYVDPTDIGSAFSVELRWTPQRVVNLALWFSLLAAIGCVALIALG---RR---------------ATPTSAAVSARFIEGGAPANLPVSSGW---IIAIAAAGGFAVLNLPRWHWLALVVVAASALSGRL------PRVLPGLATACLIVAGAFTTIEQYRNRYPPDFGWPQFFESVHVIGVLCILLLAAEAVRALVRPDAN 548          
BLAST of mRNA_M-pyrifera_M_contig88042.20455.1 vs. uniprot
Match: A0A355QHP7_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A355QHP7_9ACTN)

HSP 1 Score: 108 bits (271), Expect = 1.810e-24
Identity = 85/223 (38.12%), Postives = 118/223 (52.91%), Query Frame = 0
Query:    9 WLGLRQSHNDGWEATVDGVSL-GAPVLIDGFANGWRL-PAGADVEVLL--EWTPQRLVGRTLWLSALVVVIALGLAIRRSAPGRVRSPLRSDGPATPTLRALPVLDVATRSPAASWATAMVGASAVGVFAWANLPRLPGLALVIAALTLAGLRAGVAWLRPA-LLAALTLGLTAVAIMIAQRRFRYPPDFTWPEQFADLHVWGVLALLLLASDYVVSALRPDA 226
            WL L +S +DGW  + D V +  APVL+DG+ANGW + PAG + E+ L  EWTPQR+VG  L +S L VV+ L LA         R   R +G       A+ ++D           TA+     V V AW+NLP  P  A ++  + +  + AG  W R   LLA + +   A+ ++I Q RFRYP DF WP  F   HV GVLA+L   ++ + + L   A
Sbjct:  144 WLVLGESFSDGWRLSSDAVEVPAAPVLVDGYANGWLIDPAGHEGELSLHLEWTPQRIVGIGLLVSLLAVVLCLALA---------RKGRRDEGTDE---AAVHLIDPRGGLAVTGNRTAVGVGVLVAVGAWSNLPAWPVSAPLLG-VVMGLVLAGRCWRRILPLLATVLMATAALMVVIDQVRFRYPRDFIWPTFFDQYHVIGVLAVLCTLAEAIRTLLARRA 353          
BLAST of mRNA_M-pyrifera_M_contig88042.20455.1 vs. uniprot
Match: A0A8F4FUK9_9ACTN (DUF3367 domain-containing protein n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4FUK9_9ACTN)

HSP 1 Score: 110 bits (276), Expect = 2.930e-24
Identity = 86/227 (37.89%), Postives = 115/227 (50.66%), Query Frame = 0
Query:    1 VPGSDRDRWLGLRQSHNDGWEATVDGVSLGAPVLIDGFANGWRLPAGADVEVLLEWTPQRLVGRTLWLSALVVVIALGLAI-RRSAPGRVRS-----PLRSDGPATPTLRALPVLDVATRSPAASWATAMVGASAVGVFAWANLPRLPGLALVIAALTLAGLRAGVAWLRPALLAALTLGLTAVAIMIAQRRF--RYPPDFTWPEQFADLHVWGVLALLLLASDYVV 219
            V G+D   WL L QSHN GW+AT  G  LGAP L+DG+ANGW++PAG  + V LEWTPQ++V  +L  SAL ++ AL L +  R  P    S     PL +       LR   VL  A  +P+     A+V A+ +G  A+      PG  L++ A+ L  LR   A  RP L     L      +++A        PP F WP  F  +H    L + LLA D V+
Sbjct: 1240 VTGADDAFWLILGQSHNAGWKATAGGKDLGAPTLVDGYANGWQVPAGQTISVHLEWTPQKVVWASLAASALSILAALVLVLWPRRRPAGAESELGWIPLDARPSMPRALRLSRVLRYAGPTPSRF---ALV-ATTLGGLAFGAAMMGPGYGLLLGAVALVALRVPRA--RPLLTLGGPLLFAGTVLVVAHNALLDHLPPGFDWPTYFESVHRPAWLGVALLAFDVVI 1460          
BLAST of mRNA_M-pyrifera_M_contig88042.20455.1 vs. uniprot
Match: UPI001E513D3A (alpha-(1->3)-arabinofuranosyltransferase n=2 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E513D3A)

HSP 1 Score: 110 bits (276), Expect = 2.930e-24
Identity = 93/246 (37.80%), Postives = 123/246 (50.00%), Query Frame = 0
Query:    1 VPGSDRDRWLGLRQSHNDGWEATVDGVSLGAPVLIDGFANGWRL-PA---GADVEVLLEWTPQRLVGRTLWLSALVVVIALGLAI-----RRSAPGRVRSPLRSDG-----------PATPTLRALPVLDVATRSPA---ASWATAMVGASAVGVFAWANLP-RLPGLALVIAALTLAGLRAGVAWLRP------ALLAALTLGLTAVAIMIAQRRFRYPPDFTWPEQFADLHVWGVLALLLLASD 216
            VPGSD  RWL + QS NDGWEA+ +GV LG PVLIDG+ANGW L PA      +EV +EW PQR+V   +W+S + V + L L +     RR A     + L  D            P  P L  LP   + TR      AS   A V A A+ V    ++P RLP L  +   L +AG  A  A+  P       L AA    +    I+ +Q R  YP DF WP+ F   H+  ++A+ LL ++
Sbjct: 1210 VPGSDEARWLSVGQSWNDGWEASANGVDLGPPVLIDGYANGWLLDPAVVGDGPLEVHVEWAPQRIVWIGIWVSVVAVAVCLALVLWSERRRRHAADPAIAVLADDRGAAERADHRALPLDPDLAPLP-WRIDTRGSIVERASIRAASVAAGALFVVMLLDVPTRLPDLLAI--PLVVAG--AWWAFRSPRGRGVLGLAAASAYAVATAYIVTSQWRRDYPSDFEWPQMFERAHIVALVAVFLLLAE 1450          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88042.20455.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X5WTS2_9ACTN3.130e-6754.70Uncharacterized protein n=1 Tax=Actinomycetia bact... [more]
A0A7K1Z8T9_9ACTN1.010e-5553.95DUF3367 domain-containing protein n=2 Tax=Acidimic... [more]
A0A358A311_9ACTN4.130e-4647.79Uncharacterized protein (Fragment) n=1 Tax=Acidimi... [more]
A0A6B1EFH7_9ACTN2.540e-4447.51DUF3367 domain-containing protein n=1 Tax=Acidimic... [more]
A0A2E8LGF0_9ACTN1.400e-4245.58Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A2D8GIV0_9ACTN3.530e-4246.29Uncharacterized protein n=4 Tax=Acidimicrobiaceae ... [more]
A0A7Y2GKN9_9ACTN1.960e-3141.53Uncharacterized protein n=1 Tax=Acidimicrobiales b... [more]
A0A355QHP7_9ACTN1.810e-2438.12Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A8F4FUK9_9ACTN2.930e-2437.89DUF3367 domain-containing protein n=1 Tax=Aquihabi... [more]
UPI001E513D3A2.930e-2437.80alpha-(1->3)-arabinofuranosyltransferase n=2 Tax=R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 166..183
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 184..202
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 160..165
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..135
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 141..159
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 136..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 203..222
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 223..227
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 61..81
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 82..116
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..60
NoneNo IPR availableTMHMMTMhelixcoord: 202..221
NoneNo IPR availableTMHMMTMhelixcoord: 66..85
NoneNo IPR availableTMHMMTMhelixcoord: 117..139
NoneNo IPR availableTMHMMTMhelixcoord: 160..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88042contigM-pyrifera_M_contig88042:18..701 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88042.20455.1mRNA_M-pyrifera_M_contig88042.20455.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig88042 18..701 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig88042.20455.1 ID=prot_M-pyrifera_M_contig88042.20455.1|Name=mRNA_M-pyrifera_M_contig88042.20455.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=228bp
VPGSDRDRWLGLRQSHNDGWEATVDGVSLGAPVLIDGFANGWRLPAGADV
EVLLEWTPQRLVGRTLWLSALVVVIALGLAIRRSAPGRVRSPLRSDGPAT
PTLRALPVLDVATRSPAASWATAMVGASAVGVFAWANLPRLPGLALVIAA
LTLAGLRAGVAWLRPALLAALTLGLTAVAIMIAQRRFRYPPDFTWPEQFA
DLHVWGVLALLLLASDYVVSALRPDAH*
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