prot_M-pyrifera_M_contig88040.20454.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig88040.20454.1
Unique Nameprot_M-pyrifera_M_contig88040.20454.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length217
Homology
BLAST of mRNA_M-pyrifera_M_contig88040.20454.1 vs. uniprot
Match: F2U618_SALR5 (Alpha-L-fucosidase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U618_SALR5)

HSP 1 Score: 166 bits (421), Expect = 6.700e-45
Identity = 95/237 (40.08%), Postives = 126/237 (53.16%), Query Frame = 0
Query:    1 LPTPSPKQDQFMQNGWSMFVHFSIPTFGNIQHNCWRPKSCLNSSLFAPVDVN--------VSQWMEVALDLGVGEVVLTVKHEGGFALWETKETGYEYDVVHSPWKSNIVDAFVDAAEHAGLRYGFYFSPNANGYLTHIIGANASTFVATQVSMFHYLTTTYS-PSRIFFDHYPGECKYNEWCPGG--------FPEAWSQFTL---PASSPILILPGPDGDNAVGGESGVGSYPVW 217
            +P PS +Q ++M  G + F+HFS+ TFGNI+H+C    SCL  SLF P  +           QW++ A  +G GE+ LT  HEGGF LW +K + Y   V+ SP K +IV+AFV +     +R  FY  PNANGY T ++      FV  Q+ M   + T Y   SR+++DHY   C     CP          FP AW  F       S   LI  GPD  ++ GGE+GVG YPVW
Sbjct:  137 IPRPSKRQQEYMDMGLTQFMHFSVTTFGNIEHDC-VDGSCLPPSLFNPTHMGPDAHGITATDQWVQAAKAMGAGEICLTAHHEGGFCLWPSKFSNYT--VMQSPHKHDIVEAFVKSCRKYDVRPCFYIGPNANGYFTQVLNYTTEQFVTAQLGMIREVLTKYGFISRLWWDHYLDACGGLSECPACRNQSDPTCFPAAWHTFASLVRELSPNTLIGTGPDVSHSGGGETGVGDYPVW 370          
BLAST of mRNA_M-pyrifera_M_contig88040.20454.1 vs. uniprot
Match: A9VDX2_MONBE (Alpha-L-fucosidase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VDX2_MONBE)

HSP 1 Score: 160 bits (404), Expect = 1.800e-42
Identity = 92/237 (38.82%), Postives = 129/237 (54.43%), Query Frame = 0
Query:    1 LPTPSPKQDQFMQNGWSMFVHFSIPTFGNIQHNCWRPKSCLNSSLFAPV----DVN----VSQWMEVALDLGVGEVVLTVKHEGGFALWETKETGYEYDVVHSPWKSNIVDAFVDAAEHAGLRYGFYFSPNANGYLTHIIGANASTFVATQVSMFHYLTTTYS-PSRIFFDHYPGECKYNEWCPGG--------FPEAW---SQFTLPASSPILILPGPDGDNAVGGESGVGSYPVW 217
            +P PS +Q ++M  G + F+HFS+ TFGNI+H+C    SCL +S+F P     D N      QW++ A+D+G GE+ LT  HEGGF LW +  + Y   V+ SP+  +IV  FV +     +R  FY  PNANGY T ++   A  F   Q+ M   + T Y   SR+++DH+   C     CP          FP+AW    Q     S+  L+  GPD  ++ GGE+GVG YPVW
Sbjct:  116 IPRPSVRQLEYMDMGLTQFMHFSVTTFGNIEHDC-VDGSCLPASIFNPTAMGPDENGLTATDQWVQTAVDMGAGEICLTAHHEGGFCLWPSNYSNYT--VMQSPYPHDIVADFVASCHKYNIRPCFYIGPNANGYFTQVLNYTAERFYHAQMGMITEVLTRYGFISRLWWDHFNQGCGGLSECPACQNTSSPYCFPQAWHAFEQLVRNVSNETLLGTGPDVRHSGGGETGVGDYPVW 349          
BLAST of mRNA_M-pyrifera_M_contig88040.20454.1 vs. uniprot
Match: A0A4Q3UWF7_9BACT (Uncharacterized protein (Fragment) n=1 Tax=bacterium TaxID=1869227 RepID=A0A4Q3UWF7_9BACT)

HSP 1 Score: 91.7 bits (226), Expect = 3.500e-18
Identity = 73/227 (32.16%), Postives = 106/227 (46.70%), Query Frame = 0
Query:    1 LPT--PSPKQDQFMQNGWSMFVHFSIPTFGNIQHNCWRPKSCLNSSLFAPVDVNVSQWMEVALDLGVGEVVLTVKHEGGFALWETKETGYEYDVVHSPWKS---NIVDAFVDAAEHAGLRYGFYFSPNANGYLTHIIGANASTFVATQVSMFHYLTTTYSPSRI-FFDHYPGECKYNEWCPGGFPEAWSQFTLPA---SSPILILPGPDGD-NAVGGESGVGSYPVW 217
            LPT  P+P+Q +F    + +F+HF I TF    H  W  +  + +S F P +V+   W   A++ G+  VVLT KH  GFALW +  T  ++ V +SPWK    +++  +V+A    GL+ G Y+SP      T+        +   QVS    L T Y    I +FD    E         G    WS+ T         IL+    D D   VG E+GV  +P+W
Sbjct:    5 LPTARPTPRQLEFQDWEYGLFLHFGIRTFYE-GHKDWDGQP-MEASSFDPTEVDCDGWAMTAVEAGMRYVVLTAKHHDGFALWPSGFT--DFSVANSPWKDGQGDVIREYVEACRRHGLKVGLYYSPADASKATYADAKAYDDYFIHQVSE---LLTGYGEIDILWFDGCGSE---------GHVYDWSRITAEIRRLQPNILLFELGDPDFRWVGNEAGVAPFPLW 215          
BLAST of mRNA_M-pyrifera_M_contig88040.20454.1 vs. uniprot
Match: UPI0005653382 (alpha-L-fucosidase n=2 Tax=Streptomyces xanthophaeus TaxID=67385 RepID=UPI0005653382)

HSP 1 Score: 92.0 bits (227), Expect = 3.580e-18
Identity = 47/122 (38.52%), Postives = 65/122 (53.28%), Query Frame = 0
Query:    4 PSPKQDQFMQNGWSMFVHFSIPTFGNIQHNCWRPKSCLNSSLFAPVDVNVSQWMEVALDLGVGEVVLTVKHEGGFALWETKETGYEYDVVHSPW---KSNIVDAFVDAAEHAGLRYGFYFSP 122
            P+P Q  + Q+G+ +F+HF + TFG     C      L+ +LFAP  ++  QW+  A++ G   VVLT KH  GF LW T  T Y   V  SPW   K ++V    +A   AG+  G Y SP
Sbjct:    5 PTPAQLAWQQDGFGLFLHFGVNTFGG----CEWSDGTLDPALFAPCALDTRQWVRTAVEAGAAYVVLTAKHHDGFCLWPTATTAYS--VASSPWRGGKGDVVGELAEACREAGIGLGLYLSP 120          
BLAST of mRNA_M-pyrifera_M_contig88040.20454.1 vs. uniprot
Match: A0A522QY40_9BACT (Carbohydrate-binding protein n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A522QY40_9BACT)

HSP 1 Score: 88.6 bits (218), Expect = 7.560e-17
Identity = 45/114 (39.47%), Postives = 66/114 (57.89%), Query Frame = 0
Query:    8 QDQFMQNGWSMFVHFSIPTFGNIQHNCWRPKSCLNSSLFAPVDVNVSQWMEVALDLGVGEVVLTVKHEGGFALWETKETGYEYDVVHSPWKSNIVDAFVDAAEHAGLRYGFYFS 121
            Q QF+   + MF+HF+IPT+ N     W P   L+  +F P  ++  QW + A    +    LTVKH  GF +W+TK T  +Y+V+HSP+K ++V  FVDA    GL+   Y+S
Sbjct:   37 QQQFVDLKFGMFIHFNIPTYANQD---W-PDPDLSPEVFNPTKLDCDQWAKAAKSANMTYGCLTVKHHSGFCIWDTKTT--DYNVMHSPYKKDVVRQFVDAFRKNGLKVMLYYS 144          
BLAST of mRNA_M-pyrifera_M_contig88040.20454.1 vs. uniprot
Match: UPI001CFADE4F (alpha-L-fucosidase 1 n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFADE4F)

HSP 1 Score: 87.4 bits (215), Expect = 2.190e-16
Identity = 48/125 (38.40%), Postives = 70/125 (56.00%), Query Frame = 0
Query:    1 LPTPSPKQDQFMQNGWSMFVHFSIPTFGNIQHNCWRPKSCLNSSLFAPVDVNVSQWMEVALDLGVGEVVLTVKHEGGFALWETKETGYEYDVVHSPWKSNIVDAFVD---AAEHAGLRYGFYFSP 122
            LP PS  Q Q+  +  ++F+HF I TF + +   W      + S+F PV +N SQW++VA + G   V+LT KH  GF LW ++ T  EY V  + W++ I D   +   AA+ AG+  G Y SP
Sbjct:   52 LPLPSSSQLQWQLSSMALFLHFGINTFTDSE---WGSGHA-DPSVFNPVGLNASQWVQVAKEAGFNRVILTAKHHDGFCLWPSEYT--EYSVKFAEWRNGIGDVVAELAVAAKEAGVALGLYLSP 170          
BLAST of mRNA_M-pyrifera_M_contig88040.20454.1 vs. uniprot
Match: A0A7G6YTZ9_9BACT (Alpha-L-fucosidase n=1 Tax=Hymenobacter sp. NBH84 TaxID=2596915 RepID=A0A7G6YTZ9_9BACT)

HSP 1 Score: 86.3 bits (212), Expect = 5.570e-16
Identity = 64/218 (29.36%), Postives = 101/218 (46.33%), Query Frame = 0
Query:    4 PSPKQDQFMQNGWSMFVHFSIPTFGNIQHNCWRPKSCLNSSLFAPVDVNVSQWMEVALDLGVGEVVLTVKHEGGFALWETKETGYEYDVVHSPWKS---NIVDAFVDAAEHAGLRYGFYFSP-NANGYLTHIIGANASTFVATQVSMFHYLTTTYSPSRIFFDHYPGECKYNEWCPGGFPEAWSQFTLPASSPILILPGPDGDNAVGGESGVGSYPVW 217
            P+P+Q ++ Q   + F HF + TF N +    +     +S +F P  ++  QW+ VA + G+ +V+LT KH  GF LW +K+T  E+ V +SPWK+   ++V    DA    G+ +G Y SP + N  L      N   F   Q++    LT       ++FD   GE    +     F   ++          + + GPD    VG E+G G    W
Sbjct:   93 PAPRQLRWQQLELTAFFHFGVNTFTNREWGTGKE----SSQIFNPTQLDARQWVRVAKEAGIKQVILTAKHHDGFCLWPSKDT--EHSVKNSPWKNGHGDVVREVADACRAEGVGFGIYLSPWDMNSPLYGTPAYND--FFINQLT--ELLTNYGQVDEVWFDGANGEGPNGKKQEYDFARWYAHIRKLQPQATIAVMGPD-VRWVGTETGYGRETEW 299          
BLAST of mRNA_M-pyrifera_M_contig88040.20454.1 vs. uniprot
Match: A0A5B8UUY9_9SPHI (Carbohydrate-binding protein n=1 Tax=Mucilaginibacter ginsenosidivorans TaxID=398053 RepID=A0A5B8UUY9_9SPHI)

HSP 1 Score: 84.7 bits (208), Expect = 1.660e-15
Identity = 43/114 (37.72%), Postives = 63/114 (55.26%), Query Frame = 0
Query:    8 QDQFMQNGWSMFVHFSIPTFGNIQHNCWRPKSCLNSSLFAPVDVNVSQWMEVALDLGVGEVVLTVKHEGGFALWETKETGYEYDVVHSPWKSNIVDAFVDAAEHAGLRYGFYFS 121
            Q QF+   + MF+HF+IPT+ N     W        ++F P  V+  QW + A    +    LT KH  GF +W+TK T  +Y+V+HSP+K ++V  FVDA    GL+   Y+S
Sbjct:   30 QQQFVDLRFGMFIHFNIPTYMNQD---WADPDA-KPAIFNPASVDCDQWAKAAKSANMTYGCLTTKHHSGFCIWDTKTT--DYNVMHSPYKKDVVRQFVDAFRKNGLKVMLYYS 137          
BLAST of mRNA_M-pyrifera_M_contig88040.20454.1 vs. uniprot
Match: A0A5M8QC20_9BACT (Alpha-L-fucosidase n=1 Tax=Rufibacter glacialis TaxID=1259555 RepID=A0A5M8QC20_9BACT)

HSP 1 Score: 84.3 bits (207), Expect = 2.480e-15
Identity = 70/223 (31.39%), Postives = 104/223 (46.64%), Query Frame = 0
Query:    4 PSPKQDQFMQNGWSMFVHFSIPTFGNIQHNCWRPKSCLNSSLFAPVDVNVSQWMEVALDLGVGEVVLTVKHEGGFALWETKETGYEYDVVHSPWKS---NIVDAFVDAAEHAGLRYGFYFSP---NANGYLTHIIGANASTFVATQVSMFHYLTTTYSP-SRIFFDHYPGECKYNEWCPGGFPEAWSQFT--LPASSPILILPGPDGDNAVGGESGVGSYPVW 217
            PSP+Q ++ Q   + F HF + TF N +    +     +  +F P  ++  QW+ VA + G+ +V+LT KH  GF LW T  T  ++ V  SPWK    ++V    +A +  G+ +G Y SP   N+  Y T    A    F+A        L T Y P   ++FD   GE    +     F E W Q    L  ++ I ++ GPD    VG E+G G    W
Sbjct:   50 PSPRQLKWQQLELTAFFHFGVNTFTNREWGTGKE----DPKIFNPSQLDARQWVRVAKEAGIKQVILTAKHHDGFCLWPTATT--DHSVKSSPWKGGKGDLVKEVAEACKEYGIGFGVYLSPWDMNSPVYGTE---AYNDLFIAQLTE----LLTQYGPIEEVWFDGANGEGPNGKKQVYDF-ERWYQHIRKLQPAATIAVM-GPD-IRWVGTETGYGRETEW 256          
BLAST of mRNA_M-pyrifera_M_contig88040.20454.1 vs. uniprot
Match: A0A5R9KYX7_9BACT (Carbohydrate-binding protein n=1 Tax=Dyadobacter luticola TaxID=1979387 RepID=A0A5R9KYX7_9BACT)

HSP 1 Score: 83.2 bits (204), Expect = 5.620e-15
Identity = 41/114 (35.96%), Postives = 65/114 (57.02%), Query Frame = 0
Query:    8 QDQFMQNGWSMFVHFSIPTFGNIQHNCWRPKSCLNSSLFAPVDVNVSQWMEVALDLGVGEVVLTVKHEGGFALWETKETGYEYDVVHSPWKSNIVDAFVDAAEHAGLRYGFYFS 121
            Q QF+  G+ MF+H++IPT+G    + W      + ++F P  +N  QW E A    +    LT KH  GFA+W+TK T  +Y+V+HSP++ +IV  +  +    GL+   Y+S
Sbjct:   33 QQQFVDLGFGMFIHYNIPTYGA---DDWADPDA-SPAVFNPKKLNTDQWAEAAKSANMTYGCLTTKHHSGFAIWDTKTT--DYNVMHSPYEKDIVAEYAKSFRKQGLKVMLYYS 140          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88040.20454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F2U618_SALR56.700e-4540.08Alpha-L-fucosidase n=1 Tax=Salpingoeca rosetta (st... [more]
A9VDX2_MONBE1.800e-4238.82Alpha-L-fucosidase n=1 Tax=Monosiga brevicollis Ta... [more]
A0A4Q3UWF7_9BACT3.500e-1832.16Uncharacterized protein (Fragment) n=1 Tax=bacteri... [more]
UPI00056533823.580e-1838.52alpha-L-fucosidase n=2 Tax=Streptomyces xanthophae... [more]
A0A522QY40_9BACT7.560e-1739.47Carbohydrate-binding protein n=1 Tax=Chitinophagac... [more]
UPI001CFADE4F2.190e-1638.40alpha-L-fucosidase 1 n=1 Tax=Mangifera indica TaxI... [more]
A0A7G6YTZ9_9BACT5.570e-1629.36Alpha-L-fucosidase n=1 Tax=Hymenobacter sp. NBH84 ... [more]
A0A5B8UUY9_9SPHI1.660e-1537.72Carbohydrate-binding protein n=1 Tax=Mucilaginibac... [more]
A0A5M8QC20_9BACT2.480e-1531.39Alpha-L-fucosidase n=1 Tax=Rufibacter glacialis Ta... [more]
A0A5R9KYX7_9BACT5.620e-1535.96Carbohydrate-binding protein n=1 Tax=Dyadobacter l... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000933Glycoside hydrolase, family 29PFAMPF01120Alpha_L_fucoscoord: 44..163
e-value: 3.6E-12
score: 46.4
IPR000933Glycoside hydrolase, family 29PANTHERPTHR10030ALPHA-L-FUCOSIDASEcoord: 1..217
NoneNo IPR availableGENE3D3.20.20.80coord: 1..217
e-value: 2.3E-34
score: 121.1
NoneNo IPR availablePANTHERPTHR10030:SF37coord: 1..217
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 2..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88040contigM-pyrifera_M_contig88040:35..758 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88040.20454.1mRNA_M-pyrifera_M_contig88040.20454.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig88040 35..758 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig88040.20454.1 ID=prot_M-pyrifera_M_contig88040.20454.1|Name=mRNA_M-pyrifera_M_contig88040.20454.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp
LPTPSPKQDQFMQNGWSMFVHFSIPTFGNIQHNCWRPKSCLNSSLFAPVD
VNVSQWMEVALDLGVGEVVLTVKHEGGFALWETKETGYEYDVVHSPWKSN
IVDAFVDAAEHAGLRYGFYFSPNANGYLTHIIGANASTFVATQVSMFHYL
TTTYSPSRIFFDHYPGECKYNEWCPGGFPEAWSQFTLPASSPILILPGPD
GDNAVGGESGVGSYPVW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000933Glyco_hydro_29
IPR017853Glycoside_hydrolase_SF