prot_M-pyrifera_M_contig88030.20451.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig88030.20451.1
Unique Nameprot_M-pyrifera_M_contig88030.20451.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length138
Homology
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BLAST of mRNA_M-pyrifera_M_contig88030.20451.1 vs. uniprot
Match: A0A7Y5W796_9BACT (Uncharacterized protein n=1 Tax=Pirellulales bacterium TaxID=2715253 RepID=A0A7Y5W796_9BACT)

HSP 1 Score: 62.0 bits (149), Expect = 1.040e-9
Identity = 41/111 (36.94%), Postives = 57/111 (51.35%), Query Frame = 0 
Query:   22 VAVICLTLLSAITISLVRLSVVTQQQTERDQWRLQSAWLAESGLLRAAAQLDAGDDIATEDW-TPTGIGPSSQTGRVAITVTPDPDDETHLTITATADFPDHPTDRVRTTR 131
            + ++ L +  A+ +S+VRL+   +Q      W+ Q+AWLAESGL RAAA+L        E W  P  +     +G+V I V    D      I   AD+PD P DR R TR
Sbjct:    2 IVLVALLVAFAVLVSIVRLAAAERQAWRTQTWQTQAAWLAESGLERAAARLHDDPKYQGETWIVPAEVFGGRWSGKVTIQVATLADQPAQRQIRVQADYPDDPQDRARRTR 112
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BLAST of mRNA_M-pyrifera_M_contig88030.20451.1 vs. uniprot
Match: A0A517VNY3_9PLAN (Uncharacterized protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VNY3_9PLAN)

HSP 1 Score: 52.8 bits (125), Expect = 6.760e-6
Identity = 43/133 (32.33%), Postives = 65/133 (48.87%), Query Frame = 0 
Query:    1 RLRLSTTRPRPTRHRSGAAMIVAVICLTLLSAITISLVRLSVVTQQQTERDQWRLQSAWLAESGLLRAAAQLDAGDDIATEDWT--PTGIGPSSQTGRVAITVTPDPDDETHLTITATADFPDHPTDRVRTTR 131
            R  +S  R     +R G+  ++ +ICL L   I   L++ S    +Q +++Q+RLQS WLA++   RA  +L+   D   E W+  P  IG     G V I +         +TI  TA +P   T+RVR  R
Sbjct:   10 RSNISEKRQGGKTNRGGSVALIPMICLILSLTIIGELLKQSSTEIKQLKKEQYRLQSIWLADAAAQRAITKLNNQTDYDGEMWSLSPEDIG-GEFPGEVLIEIDRSIQKNNSITIRTTASYPAKSTERVRVIR 141
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88030.20451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7Y5W796_9BACT1.040e-936.94Uncharacterized protein n=1 Tax=Pirellulales bacte... [more]
A0A517VNY3_9PLAN6.760e-632.33Uncharacterized protein n=2 Tax=Gimesia aquarii Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..138
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..42
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88030contigM-pyrifera_M_contig88030:248..661 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88030.20451.1mRNA_M-pyrifera_M_contig88030.20451.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig88030 248..661 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig88030.20451.1 ID=prot_M-pyrifera_M_contig88030.20451.1|Name=mRNA_M-pyrifera_M_contig88030.20451.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=138bp
RLRLSTTRPRPTRHRSGAAMIVAVICLTLLSAITISLVRLSVVTQQQTER
DQWRLQSAWLAESGLLRAAAQLDAGDDIATEDWTPTGIGPSSQTGRVAIT
VTPDPDDETHLTITATADFPDHPTDRVRTTRARTITRT
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