prot_M-pyrifera_M_contig88027.20449.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig88027.20449.1
Unique Nameprot_M-pyrifera_M_contig88027.20449.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length109
Homology
BLAST of mRNA_M-pyrifera_M_contig88027.20449.1 vs. uniprot
Match: A0A7W0V787_9CHLR (Glycine--tRNA ligase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0V787_9CHLR)

HSP 1 Score: 115 bits (288), Expect = 4.450e-31
Identity = 62/105 (59.05%), Postives = 76/105 (72.38%), Query Frame = 0
Query:    3 DAKGKVTTRQVLRLHPDLAPFRAAVLPLSKKPQDLIDVASDLHQALLFNLGD-VDYDIKGAIGRRYRRHDEIGTPFCITVDHDSLQDNEVTVRFRDSSKQTRVPI 106
            D  GK  TR VLRLHP +AP++AAVLPL KK Q+L + A +L Q L+ + G  VDYD  G IG+RYRR DEIGTPFC T+D D+LQD+ VTVR RD  +Q R+ I
Sbjct:    7 DVNGKPDTRVVLRLHPRVAPYKAAVLPLMKK-QELAEPARNLFQTLVDSSGVLVDYDESGNIGKRYRRQDEIGTPFCFTIDFDTLQDSSVTVRHRDDMRQERLAI 110          
BLAST of mRNA_M-pyrifera_M_contig88027.20449.1 vs. uniprot
Match: UPI00199C2E9E (His/Gly/Thr/Pro-type tRNA ligase C-terminal domain-containing protein n=1 Tax=Salmonella enterica TaxID=28901 RepID=UPI00199C2E9E)

HSP 1 Score: 115 bits (289), Expect = 9.340e-31
Identity = 64/103 (62.14%), Postives = 73/103 (70.87%), Query Frame = 0
Query:    5 KGKVTTRQVLRLHPDLAPFRAAVLPLSKKPQDLIDVASDLHQALLFNLGDVDYDIKGAIGRRYRRHDEIGTPFCITVDHDSLQDNEVTVRFRDSSKQTRVPID 107
            KG V  R VLRL P LAP +AAVLPLSKKP+ L  VA DL Q L  N   +DYD  GAIGRRYRR DEIGTP CITVD D+L D  VT+R RD+ +Q RV ++
Sbjct:    2 KGGVDKRTVLRLDPRLAPVKAAVLPLSKKPE-LQSVAQDLAQDLRLNDWMIDYDESGAIGRRYRRQDEIGTPLCITVDFDTLDDQAVTIRERDTMQQERVALN 103          
BLAST of mRNA_M-pyrifera_M_contig88027.20449.1 vs. uniprot
Match: A0A358C171_9BACT (Glycine--tRNA ligase (Fragment) n=1 Tax=Candidatus Uhrbacteria bacterium TaxID=2053634 RepID=A0A358C171_9BACT)

HSP 1 Score: 115 bits (288), Expect = 1.030e-30
Identity = 60/104 (57.69%), Postives = 80/104 (76.92%), Query Frame = 0
Query:    3 DAKGKVTTRQVLRLHPDLAPFRAAVLPLSKKPQDLIDVASDLHQALLFNLGDVDYDIKGAIGRRYRRHDEIGTPFCITVDHDSLQDNEVTVRFRDSSKQTRVPI 106
            D+KG V TR V++L P++AP++ AVLPLSKK Q LI  A  ++  LL N   V++D+ G+IG+RYRR DEIGTPFC+TVD ++L+D  VTVR RD+ +QTRVPI
Sbjct:   38 DSKGGVDTRVVMKLTPEMAPYQVAVLPLSKKDQ-LIAPAQVIYNTLL-NTMRVEFDLSGSIGKRYRRQDEIGTPFCVTVDFETLEDKAVTVRDRDTMQQTRVPI 139          
BLAST of mRNA_M-pyrifera_M_contig88027.20449.1 vs. uniprot
Match: A0A0W8IFB1_9MICC (Glycine--tRNA ligase n=10 Tax=Nesterenkonia TaxID=57494 RepID=A0A0W8IFB1_9MICC)

HSP 1 Score: 119 bits (298), Expect = 1.480e-29
Identity = 64/105 (60.95%), Postives = 77/105 (73.33%), Query Frame = 0
Query:    3 DAKGKVTTRQVLRLHPDLAPFRAAVLPLSKKPQDLIDVASDLHQALLFNLGDVDYDIKGAIGRRYRRHDEIGTPFCITVDHDSLQDNEVTVRFRDSSKQTRVPID 107
            + KG V TR VL+LHP LAP +AAVLPLSKKP+ L  V+ DL Q+L  +   +D+D  GAIGRRYRR DEIGTPFCITVD D+L+D  VT+R RD   Q RV +D
Sbjct:  346 NTKGGVDTRTVLKLHPKLAPVKAAVLPLSKKPE-LAGVSQDLAQSLRQHWN-IDFDDSGAIGRRYRRQDEIGTPFCITVDFDTLEDQAVTIRDRDEMTQERVSLD 448          
BLAST of mRNA_M-pyrifera_M_contig88027.20449.1 vs. uniprot
Match: A0A6J4UM06_9CHLR (Glycine--tRNA ligase n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4UM06_9CHLR)

HSP 1 Score: 119 bits (298), Expect = 1.650e-29
Identity = 63/106 (59.43%), Postives = 76/106 (71.70%), Query Frame = 0
Query:    2 VDAKGKVTTRQVLRLHPDLAPFRAAVLPLSKKPQDLIDVASDLHQALLFNLGD-VDYDIKGAIGRRYRRHDEIGTPFCITVDHDSLQDNEVTVRFRDSSKQTRVPI 106
            VD  GK  TR VLRLHP LAP++AAVLPL+KKP+ L +VA  L   L    G  +DYD    IG+RYRR DEIGTPFC+TVD D+LQD  VT+R RD++ Q RVP+
Sbjct:  355 VDVNGKPDTRVVLRLHPRLAPYKAAVLPLAKKPE-LTEVAKTLFDTLEAETGALIDYDETANIGKRYRRQDEIGTPFCVTVDFDTLQDRAVTIRDRDTTNQERVPL 459          
BLAST of mRNA_M-pyrifera_M_contig88027.20449.1 vs. uniprot
Match: A0A7W0SAT2_9CHLR (Glycine--tRNA ligase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0SAT2_9CHLR)

HSP 1 Score: 114 bits (284), Expect = 1.730e-29
Identity = 61/106 (57.55%), Postives = 75/106 (70.75%), Query Frame = 0
Query:    2 VDAKGKVTTRQVLRLHPDLAPFRAAVLPLSKKPQDLIDVASDLHQALLFNLGD-VDYDIKGAIGRRYRRHDEIGTPFCITVDHDSLQDNEVTVRFRDSSKQTRVPI 106
            VD  GK  TR +LRLHP LAP++AAVLPL KKP+ L +VA  L   L    G  VDYD  G IG+RYRR DEIGTPFC T+D+++L D  VTVR RD++ Q R+P+
Sbjct:   88 VDVNGKPDTRVLLRLHPRLAPYKAAVLPLMKKPE-LAEVARSLFTRLEDETGALVDYDETGNIGKRYRRQDEIGTPFCFTIDYETLDDQAVTVRDRDTTAQERLPL 192          
BLAST of mRNA_M-pyrifera_M_contig88027.20449.1 vs. uniprot
Match: A0A259S9Q3_9MICO (Glycine--tRNA ligase (Fragment) n=1 Tax=Microbacterium sp. 14-71-5 TaxID=1970400 RepID=A0A259S9Q3_9MICO)

HSP 1 Score: 116 bits (290), Expect = 2.330e-29
Identity = 65/106 (61.32%), Postives = 74/106 (69.81%), Query Frame = 0
Query:    4 AKGKVTTRQVLRLHPDLAPFRAAVLPLSKKPQDLIDVASDLHQALLFNLGDVDYDIKGAIGRRYRRHDEIGTPFCITVDHDSLQDNEVTVRFRDSSKQTRVPIDLL 109
            A GK  TR VLRL P LAPF  AVLPLSKK   L+ VA ++   LL    DVDYD   AIGRRYRR DE+GTP+C+TVD DSL D  VTVR RD+ +Q R+PID L
Sbjct:  195 ADGKADTRTVLRLDPRLAPFTIAVLPLSKK-DTLVPVAQEVAD-LLREFWDVDYDDAQAIGRRYRRQDEVGTPYCVTVDFDSLGDRAVTVRDRDTMQQVRIPIDQL 298          
BLAST of mRNA_M-pyrifera_M_contig88027.20449.1 vs. uniprot
Match: A0A7V8VWF9_9CHLR (Glycine--tRNA ligase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V8VWF9_9CHLR)

HSP 1 Score: 112 bits (279), Expect = 3.700e-29
Identity = 63/106 (59.43%), Postives = 74/106 (69.81%), Query Frame = 0
Query:    2 VDAKGKVTTRQVLRLHPDLAPFRAAVLPLSKKPQDLIDVASDLHQALLFNLGD-VDYDIKGAIGRRYRRHDEIGTPFCITVDHDSLQDNEVTVRFRDSSKQTRVPI 106
            VD  GK  TR VLRL P LAP++AAVLPL+KKP+ L  VA +L   L  +L   VDYD    IG+RYRR DEIGTPFC+TVD DSL+D  VTVR RD+  Q R+ I
Sbjct:   51 VDVNGKADTRVVLRLAPRLAPYKAAVLPLAKKPE-LTTVARELFTTLQDDLDTLVDYDETANIGKRYRRQDEIGTPFCLTVDFDSLEDGAVTVRDRDTMAQERIAI 155          
BLAST of mRNA_M-pyrifera_M_contig88027.20449.1 vs. uniprot
Match: UPI00182E9A4A (Glycine--tRNA ligase n=1 Tax=Streptomyces sp. TaxID=1931 RepID=UPI00182E9A4A)

HSP 1 Score: 113 bits (283), Expect = 3.940e-29
Identity = 63/105 (60.00%), Postives = 75/105 (71.43%), Query Frame = 0
Query:    3 DAKGKVTTRQVLRLHPDLAPFRAAVLPLSKKPQDLIDVASDLHQALLFNLGDVDYDIKGAIGRRYRRHDEIGTPFCITVDHDSLQDNEVTVRFRDSSKQTRVPID 107
            +AKGK+  R VLRL P LAP + AVLPLS+ P+ L   A  L QAL  +   +D+D  GAIGRRYRR DEIGTP+C+TVD D+L DN VTVR RDS KQ RV +D
Sbjct:  108 NAKGKMEKRTVLRLDPRLAPVKVAVLPLSRNPE-LSPKAKGLAQALRQHWN-IDFDDAGAIGRRYRRQDEIGTPYCVTVDFDTLDDNAVTVRERDSMKQERVSLD 210          
BLAST of mRNA_M-pyrifera_M_contig88027.20449.1 vs. uniprot
Match: A0A3D4QWD1_9FIRM (Glycine--tRNA ligase (Fragment) n=1 Tax=Clostridiales bacterium TaxID=1898207 RepID=A0A3D4QWD1_9FIRM)

HSP 1 Score: 109 bits (272), Expect = 7.330e-29
Identity = 57/97 (58.76%), Postives = 74/97 (76.29%), Query Frame = 0
Query:   11 RQVLRLHPDLAPFRAAVLPLSKKPQDLIDVASDLHQALLFNLGDVDYDIKGAIGRRYRRHDEIGTPFCITVDHDSLQDNEVTVRFRDSSKQTRVPID 107
            R V++LHP LAPF+AAVLPLSKK   L + A +L+ +L+     +DYD  G+IG+RYRR DEIGTP+CITVD D+L+D  VTVR RD+ +Q R+PID
Sbjct:    1 RVVMKLHPALAPFQAAVLPLSKK---LKEPAEELYSSLVGKFN-IDYDETGSIGKRYRREDEIGTPYCITVDFDTLEDQAVTVRDRDTMEQIRLPID 93          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88027.20449.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7W0V787_9CHLR4.450e-3159.05Glycine--tRNA ligase n=1 Tax=Chloroflexia bacteriu... [more]
UPI00199C2E9E9.340e-3162.14His/Gly/Thr/Pro-type tRNA ligase C-terminal domain... [more]
A0A358C171_9BACT1.030e-3057.69Glycine--tRNA ligase (Fragment) n=1 Tax=Candidatus... [more]
A0A0W8IFB1_9MICC1.480e-2960.95Glycine--tRNA ligase n=10 Tax=Nesterenkonia TaxID=... [more]
A0A6J4UM06_9CHLR1.650e-2959.43Glycine--tRNA ligase n=1 Tax=uncultured Thermomicr... [more]
A0A7W0SAT2_9CHLR1.730e-2957.55Glycine--tRNA ligase n=1 Tax=Chloroflexia bacteriu... [more]
A0A259S9Q3_9MICO2.330e-2961.32Glycine--tRNA ligase (Fragment) n=1 Tax=Microbacte... [more]
A0A7V8VWF9_9CHLR3.700e-2959.43Glycine--tRNA ligase n=1 Tax=Chloroflexia bacteriu... [more]
UPI00182E9A4A3.940e-2960.00Glycine--tRNA ligase n=1 Tax=Streptomyces sp. TaxI... [more]
A0A3D4QWD1_9FIRM7.330e-2958.76Glycine--tRNA ligase (Fragment) n=1 Tax=Clostridia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004154Anticodon-bindingPFAMPF03129HGTP_anticodoncoord: 25..107
e-value: 3.4E-18
score: 65.6
IPR036621Anticodon-binding domain superfamilyGENE3D3.40.50.800coord: 17..109
e-value: 2.8E-27
score: 97.0
IPR027031Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2PANTHERPTHR10745GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2coord: 6..107
NoneNo IPR availablePANTHERPTHR10745:SF19coord: 6..107
NoneNo IPR availableSUPERFAMILY52954Class II aaRS ABD-relatedcoord: 11..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88027contigM-pyrifera_M_contig88027:39..365 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88027.20449.1mRNA_M-pyrifera_M_contig88027.20449.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig88027 39..365 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig88027.20449.1 ID=prot_M-pyrifera_M_contig88027.20449.1|Name=mRNA_M-pyrifera_M_contig88027.20449.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp
MVDAKGKVTTRQVLRLHPDLAPFRAAVLPLSKKPQDLIDVASDLHQALLF
NLGDVDYDIKGAIGRRYRRHDEIGTPFCITVDHDSLQDNEVTVRFRDSSK
QTRVPIDLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004154Anticodon-bd
IPR036621Anticodon-bd_dom_sf
IPR027031Gly-tRNA_synthase/POLG2