prot_M-pyrifera_M_contig88025.20448.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig88025.20448.1
Unique Nameprot_M-pyrifera_M_contig88025.20448.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length230
Homology
BLAST of mRNA_M-pyrifera_M_contig88025.20448.1 vs. uniprot
Match: J9FV51_9SPIT (DNA topoisomerase n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9FV51_9SPIT)

HSP 1 Score: 217 bits (552), Expect = 1.260e-61
Identity = 103/217 (47.47%), Postives = 147/217 (67.74%), Query Frame = 0
Query:    1 KNDQAHPPIHPTKLATRAALRGEGEWPLYRYVTRRFLAACSQDAKGNETTLTVDAGGERFSATGLVVLERNFLDVFPYERWNARSLPALELGATLDPAQTDLQLTDSETRPPTLLTESELIARMDREGIGTDATIADHIKTVQDRKYVFKDGSYLTPSSFGMGLYRAYERIGVALCKPYLRREMERDCQAVADGRKQAPAVVRECVGSMHQVYDLVR 217
            ++D+AHPPIHP K A++  L G  EW +Y  V R FLA  S+DA G ET + V  GGE+F   GL++ E+N+L+VFPYE+W+   LP L  G + +    +L++ D ETRPP LLTE++LI +MD+ GIGTDATI +HIK +Q+R+Y +K G    PS  G  L  AYE +G+ L KPYLR +ME+D + +A+G K    V+R+CV  M ++++ V+
Sbjct:  387 QDDKAHPPIHPVKFASKQDL-GFDEWRVYELVARHFLATISKDAIGAETCIEVSCGGEQFQTKGLIIEEQNWLEVFPYEKWSDSYLPQLNKGESFEVNNQNLKIQDGETRPPPLLTEADLITKMDQNGIGTDATIHEHIKHIQERQYAYKQGQTFLPSPLGTNLVEAYEHLGIELYKPYLRAQMEKDMKMIAEGIKSKDQVLRDCVNEMRRIFNRVK 602          
BLAST of mRNA_M-pyrifera_M_contig88025.20448.1 vs. uniprot
Match: A0A1V9Z583_9STRA (DNA topoisomerase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z583_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.560e-60
Identity = 106/231 (45.89%), Postives = 153/231 (66.23%), Query Frame = 0
Query:    2 NDQAHPPIHPTKLATRAALRGEGEWPLYRYVTRRFLAACSQDAKGNETTLTVDAGGERFSATGLVVLERNFLDVFPYERWNARSLPALELGATLDPAQTDLQLTDSETRPPTLLTESELIARMDREGIGTDATIADHIKTVQDRKYVFK--DGSYLTPSSFGMGLYRAYERIGVALCKPYLRREMERDCQAVADGRKQAPAVVRECVGSMHQVYDLVRARRSIIIDSVKAF 230
            +DQAHPPIHPTK    AA+  + E  +Y +V R FLA CS+DA+G++T++ +    E F A GL++LERN+LD++ YE+W A ++P  E G T  P  T L L   ET PP LLTES+LIA+MD+ GIGTDATIA+HI T+  R+Y  K  + +   P+  G+ L + Y+R+G  L KP LR  MERDC A+A G+K    VVR+C+  M  +++ V AR +++ ++ + +
Sbjct:  383 DDQAHPPIHPTKSVALAAITNDVERRVYEFVVRHFLACCSRDARGSQTSVAMRLADETFGAKGLMILERNYLDIYKYEKWAATTIPVYERGDTFVP--TTLLLKAGETAPPPLLTESDLIAKMDQHGIGTDATIAEHINTILKRQYAVKVNNDTQFQPTELGLALVQTYDRMGYQLAKPDLRAAMERDCNAIAQGQKTCEQVVRDCMSQMKTIFESVVARSNVLDETFQGY 611          
BLAST of mRNA_M-pyrifera_M_contig88025.20448.1 vs. uniprot
Match: A0A7J8BJ70_MOLMO (DNA topoisomerase n=1 Tax=Molossus molossus TaxID=27622 RepID=A0A7J8BJ70_MOLMO)

HSP 1 Score: 197 bits (500), Expect = 4.770e-58
Identity = 102/215 (47.44%), Postives = 147/215 (68.37%), Query Frame = 0
Query:    1 KNDQAHPPIHPTKLATRAALRGEGEWPLYRYVTRRFLAACSQDAKGNETTLTVDAGGERFSATGLVVLERNFLDVFPYERWNARSLPALELGATLDPAQTDLQLTDSETRPPTLLTESELIARMDREGIGTDATIADHIKTVQDRKYV--FKDGSYLTPSSFGMGLYRAYERIGVALCKPYLRREMERDCQAVADGRKQAPAVVRECVGSMHQVY 213
            K+DQAHPPIHPTK  +  +L+G+ E  LY ++ R FLA CSQDA+G ETT+ +D   ERF A GLV+L RN+LDV+PY+RW+ ++LP  E G+   P+   +++ D ET PP LLTE++LIA M++ GIGTDAT A+HI+T++ R YV    D  +L P   GMGL   Y+ +G A+ KP LR E+E + + + +G+K+   V+R+ +    QV+
Sbjct:  102 KSDQAHPPIHPTKYTS--SLQGD-EQRLYEFIVRHFLACCSQDAQGQETTVEIDISQERFVAHGLVILARNYLDVYPYDRWSDKTLPVYERGSHFQPST--VEMVDGETSPPQLLTEADLIALMEKHGIGTDATHAEHIETIKARMYVGLTPDKRFL-PGHLGMGLVEGYDSMGHAMSKPDLRAELEANLKLICEGKKEKSVVLRQQIQKYKQVF 310          
BLAST of mRNA_M-pyrifera_M_contig88025.20448.1 vs. uniprot
Match: A0A4C1VAH6_EUMVA (DNA topoisomerase n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1VAH6_EUMVA)

HSP 1 Score: 205 bits (522), Expect = 4.980e-58
Identity = 104/230 (45.22%), Postives = 156/230 (67.83%), Query Frame = 0
Query:    1 KNDQAHPPIHPTKLATRAALRGEGEWPLYRYVTRRFLAACSQDAKGNETTLTVDAGGERFSATGLVVLERNFLDVFPYERWNARSLPALELGATLDPAQTDLQLTDSETRPPTLLTESELIARMDREGIGTDATIADHIKTVQDRKYV-FKDGSYLTPSSFGMGLYRAYERIGVALCKPYLRREMERDCQAVADGRKQAPAVVRECVGSMHQVYDLVRARRSIIIDSVKA 229
            K+D+AHPPIHPTK      L G  E  +Y ++ R FLA CS+DA+G ET++T+D  GE+FSATGL++  RN+LDV+PYE+W+++ +   E G T DP  T +++ +  T PP LLTE++LIA M++ GIGTDAT A+HI+T+++R YV   +  +  P   GMGL   Y+ +G+ + KP+LR ++E D +A+++GRKQ  AV+ E +    +VY  V A  ++ ID+  A
Sbjct:  253 KSDKAHPPIHPTKYTNN--LTGN-EQRIYEFIVRSFLACCSKDAQGQETSVTIDIAGEKFSATGLMITARNYLDVYPYEKWSSKEIHIYENGQTFDP--TVIEMVEGSTSPPNLLTEADLIALMEKHGIGTDATHAEHIETIKNRSYVALANAVHFVPGLLGMGLVEGYDAMGLHISKPHLRAQLEADLKAISEGRKQPQAVLAEQIAKYKEVYITVTAE-ALKIDNALA 476          
BLAST of mRNA_M-pyrifera_M_contig88025.20448.1 vs. uniprot
Match: T1I0Z0_RHOPR (DNA topoisomerase (Fragment) n=1 Tax=Rhodnius prolixus TaxID=13249 RepID=T1I0Z0_RHOPR)

HSP 1 Score: 204 bits (519), Expect = 8.090e-58
Identity = 98/227 (43.17%), Postives = 154/227 (67.84%), Query Frame = 0
Query:    1 KNDQAHPPIHPTKLATRAALRGEGEWPLYRYVTRRFLAACSQDAKGNETTLTVDAGGERFSATGLVVLERNFLDVFPYERWNARSLPALELGATLDPAQTDLQLTDSETRPPTLLTESELIARMDREGIGTDATIADHIKTVQDRKYVFKDGSYLTPSSFGMGLYRAYERIGVALCKPYLRREMERDCQAVADGRKQAPAVVRECVGSMHQVYDLVRARRSIIIDSV 227
            K+DQ+HPPIHP K     +L+G  E  +Y ++ R FLA  S+DAKG+ET + ++  GE F A+GL++LERN+LDV+PYE WN++++   E+G T  P   D++  +S+T PP LLTE++LIA M++ GIGTDAT A+HI+T++ R YV  +G+Y  PS+ GMGL   Y+ +G A+ KP+LR E+E D + + DG ++   V+RE +     ++   + + + I +++
Sbjct:  409 KSDQSHPPIHPIKYTN--SLQGN-EAKMYEFIVRHFLACVSKDAKGHETNVLIEINGEEFQASGLMILERNYLDVYPYENWNSKNIHYYEVGQTFHPTILDIE--ESQTSPPNLLTEADLIALMEKHGIGTDATHAEHIETIKTRSYVGLEGNYFVPSAIGMGLVEGYDTMGFAMSKPHLRAELEADLKRICDGVRRPEDVLREQIDKYRNLFQQAKLQVNKIDEAI 630          
BLAST of mRNA_M-pyrifera_M_contig88025.20448.1 vs. uniprot
Match: A0A067D7B1_SAPPC (DNA topoisomerase n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067D7B1_SAPPC)

HSP 1 Score: 207 bits (526), Expect = 8.400e-58
Identity = 104/231 (45.02%), Postives = 146/231 (63.20%), Query Frame = 0
Query:    2 NDQAHPPIHPTKLATRAALRGEGEWPLYRYVTRRFLAACSQDAKGNETTLTVDAGGERFSATGLVVLERNFLDVFPYERWNARSLPALELGATLDPAQTDLQLTDSETRPPTLLTESELIARMDREGIGTDATIADHIKTVQDRKYVFK--DGSYLTPSSFGMGLYRAYERIGVALCKPYLRREMERDCQAVADGRKQAPAVVRECVGSMHQVYDLVRARRSIIIDSVKAF 230
            +DQAHPPIHPTK    ++L  + E  +Y  V R FLA CS DA+G++T +T+    E F+A+GL++L RN+LD++ YE+W A  +P  E G    P  T L L   ET PP LLTES+LIA+MD  GIGTDATIA+HI T+  R+Y  K  + +   P+  G+ L + Y+R+G  L KP LR  +ERDC A+A G+K    VVR C+  M  +Y  V AR  ++ ++ + +
Sbjct:  383 DDQAHPPIHPTKCVPLSSLNNDVERRVYELVVRHFLACCSMDARGSQTNVTMTLASETFTASGLMILARNYLDIYVYEKWAATVIPVYERGDRFVP--TTLLLKRGETAPPPLLTESDLIAKMDTHGIGTDATIAEHINTILKRQYAIKVNNNTQFKPTELGLALVQTYDRMGYQLAKPDLRAAVERDCNAIAQGQKSCDQVVRSCMDQMRTIYQNVVARSGVLDETFQGY 611          
BLAST of mRNA_M-pyrifera_M_contig88025.20448.1 vs. uniprot
Match: G4TIC8_SERID (DNA topoisomerase n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4TIC8_SERID)

HSP 1 Score: 202 bits (514), Expect = 9.040e-58
Identity = 111/235 (47.23%), Postives = 154/235 (65.53%), Query Frame = 0
Query:    1 KNDQAHPPIHPTKLATRAALRGEGEWPLYRYVTRRFLAACSQDAKGNETTLTVDAGGERFSATGLVVLERNFLDVFPYERWNARSLPALELGATLDPAQTDLQLTDSETRPPTLLTESELIARMDREGIGTDATIADHIKTVQDRKYVFK----DGSYLTPSSFGMGLYRAYERIGV--ALCKPYLRREMERDCQAVADGRKQAPAVVRECVGSMHQVYDLVRARRSIIIDSVKA 229
            KND+AHPPIHPT  A   A     E  +Y YVTRRFLA+CS+DA+G +TT+TV   GE FSA+GL+VLERN+L+VFPY++W++  LP  E G    P  T  +L + ET  P+LLTE++L++ MD+ GIGTDATIA HI T+ +R+YV +    +  YL PS+ G+GL   Y +IG+  +L KP LRRE ER    V D  K    +++E +    +V+ L R   ++II+  +A
Sbjct:  351 KNDKAHPPIHPTAYAGNLA---GNEKKVYEYVTRRFLASCSKDAEGFQTTITVAVNGEEFSASGLLVLERNYLEVFPYDKWSSHELPPFEEGEEFMP--TICELREGETTRPSLLTEADLVSLMDKNGIGTDATIAQHINTIVEREYVMERLEGNTKYLVPSTLGVGLVHGYNQIGLEKSLSKPQLRRETERSMVQVCDRIKTKDDMLQESIEQYKEVFILARREFNLIINKDQA 580          
BLAST of mRNA_M-pyrifera_M_contig88025.20448.1 vs. uniprot
Match: T1J1V7_STRMM (DNA topoisomerase n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1J1V7_STRMM)

HSP 1 Score: 206 bits (523), Expect = 1.270e-57
Identity = 106/226 (46.90%), Postives = 149/226 (65.93%), Query Frame = 0
Query:    1 KNDQAHPPIHPTKLATRAALRGEGEWPLYRYVTRRFLAACSQDAKGNETTLTVDAGGERFSATGLVVLERNFLDVFPYERWNARSLPALELGATLDPAQTDLQLTDSETRPPTLLTESELIARMDREGIGTDATIADHIKTVQDRKYV-FKDGSYLTPSSFGMGLYRAYERIGVALCKPYLRREMERDCQAVADGRKQAPAVVRECVGSMHQVYDLVRARRSIIID 225
            K D AHPPIHPTK A +  L+G+ E  +Y +V R FLA CS+DAKG+ETT+ +D   ERF+A GL++LERN+LDV+PYE W+A+ +P  E+  T  P+  D+     ET  P LLTE++LIA MD+ GIGTDAT A+HI+T++ R YV   +     P   G GL   Y+ +G A+ KP+LR E+E D Q + DG K A AV+ E +G    V++   A++++ +D
Sbjct:  380 KTDNAHPPIHPTKYADQ--LQGD-EKCVYEFVVRHFLACCSKDAKGHETTIEIDVAQERFTANGLIILERNYLDVYPYESWSAKVIPHFEMNRTFQPSAIDM--VGGETSSPPLLTEADLIALMDKHGIGTDATHAEHIETIKQRSYVGLNEHKAFLPGELGFGLVEGYDSMGFAMSKPHLRAELESDLQKICDGTKAAEAVLTEQIGKYRSVFEEA-AKQAVKLD 599          
BLAST of mRNA_M-pyrifera_M_contig88025.20448.1 vs. uniprot
Match: A0A0C3PNK5_PISTI (DNA topoisomerase n=1 Tax=Pisolithus tinctorius Marx 270 TaxID=870435 RepID=A0A0C3PNK5_PISTI)

HSP 1 Score: 205 bits (521), Expect = 2.220e-57
Identity = 108/235 (45.96%), Postives = 157/235 (66.81%), Query Frame = 0
Query:    2 NDQAHPPIHPTKLATRAALRGEGEWPLYRYVTRRFLAACSQDAKGNETTLTVDAGGERFSATGLVVLERNFLDVFPYERWNARSLPALELGATLDPAQTDLQLTDSETRPPTLLTESELIARMDREGIGTDATIADHIKTVQDRKYVFK--DGS--YLTPSSFGMGLYRAYERIGV--ALCKPYLRREMERDCQAVADGRKQAPAVVRECVGSMHQVYDLVRARRSIIIDSVKAF 230
            ND+AHPPIHPT  A    L G+ +  +Y ++TRRFLA+CS+DA+G+ETT+ V+ GGE F ATGL+VL+RN+LDV+PY++WNA+ +P    G   +P  T  ++ + +T PP LLTE++L+A MD+ GIGTDATIA HI+T+ DR+YV +  DG+  +L PS+ GMGL   Y  IG   +L KP LRRE ER    V +G K    ++ E +    ++Y + +     ++ SV+ +
Sbjct:  379 NDKAHPPIHPTAHA--GNLTGDDK-KVYDFITRRFLASCSKDAEGSETTVEVEYGGEEFYATGLIVLQRNYLDVYPYDKWNAKEIPNFRDGEEFEP--TSCEIKEGKTTPPPLLTEADLVALMDKNGIGTDATIAQHIQTIIDREYVIERMDGTTKHLLPSTLGMGLVEGYNEIGFDRSLSKPQLRRETERSMVQVCEGTKSKDQMLLESIEQYREMYIIAKREFGKVLSSVRRY 608          
BLAST of mRNA_M-pyrifera_M_contig88025.20448.1 vs. uniprot
Match: A0A4D9CZ97_9STRA (DNA topoisomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ97_9STRA)

HSP 1 Score: 206 bits (523), Expect = 2.410e-57
Identity = 112/230 (48.70%), Postives = 147/230 (63.91%), Query Frame = 0
Query:    1 KNDQAHPPIHPTKLATRAALRGEGEWPLYRYVTRRFLAACSQDAKGNETTLTVDAGGERFSATGLVVLERNFLDVFP-YERWNARSLPA--LELGATLDPAQTDLQLTDSETRPPTLLTESELIARMDREGIGTDATIADHIKTVQDRKYVFKDGSY-------------LTPSSFGMGLYRAYERIGVALCKPYLRREMERDCQAVADGRKQAPAVVRECVGSMHQVYD 214
            K+DQAHPPIHPTKLA    L+G  E  +Y  V R FLA CS DAKG  T +TV+ GGE F+ATG+V+LERN+LDV+  +E+W+A +LPA  L++GA   P  T L L    T+PP LL+E++LI+RMD +GIGTDATIA HIKT+  RKYV                     P++ G+GL   YE IG  L KP LR EMER+C+ VA G +    +V+ C+  M + ++
Sbjct:  404 KDDQAHPPIHPTKLAAPQELKGTDEQKVYELVVRHFLACCSDDAKGKRTKVTVEMGGEEFTATGIVILERNWLDVYNGWEKWHASTLPANVLQVGAAFVP--TSLTLETGRTQPPPLLSEADLISRMDEKGIGTDATIAQHIKTILQRKYVTXXXXXXXXXXXXXXLQRRFQPTNLGLGLVEGYEEIGYQLTKPELRAEMERECKRVARGERGRTEMVQACLLKMKECFE 631          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88025.20448.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
J9FV51_9SPIT1.260e-6147.47DNA topoisomerase n=1 Tax=Oxytricha trifallax TaxI... [more]
A0A1V9Z583_9STRA1.560e-6045.89DNA topoisomerase n=1 Tax=Achlya hypogyna TaxID=12... [more]
A0A7J8BJ70_MOLMO4.770e-5847.44DNA topoisomerase n=1 Tax=Molossus molossus TaxID=... [more]
A0A4C1VAH6_EUMVA4.980e-5845.22DNA topoisomerase n=1 Tax=Eumeta variegata TaxID=1... [more]
T1I0Z0_RHOPR8.090e-5843.17DNA topoisomerase (Fragment) n=1 Tax=Rhodnius prol... [more]
A0A067D7B1_SAPPC8.400e-5845.02DNA topoisomerase n=3 Tax=Saprolegnia TaxID=4769 R... [more]
G4TIC8_SERID9.040e-5847.23DNA topoisomerase n=1 Tax=Serendipita indica (stra... [more]
T1J1V7_STRMM1.270e-5746.90DNA topoisomerase n=1 Tax=Strigamia maritima TaxID... [more]
A0A0C3PNK5_PISTI2.220e-5745.96DNA topoisomerase n=1 Tax=Pisolithus tinctorius Ma... [more]
A0A4D9CZ97_9STRA2.410e-5748.70DNA topoisomerase n=1 Tax=Nannochloropsis salina C... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013497DNA topoisomerase, type IA, centralPRINTSPR00417PRTPISMRASEIcoord: 28..44
score: 35.11
coord: 128..142
score: 45.57
IPR013497DNA topoisomerase, type IA, centralPFAMPF01131Topoisom_baccoord: 3..202
e-value: 2.0E-50
score: 172.0
IPR003602DNA topoisomerase, type IA, DNA-binding domainSMARTSM00437topIaneu2coord: 1..165
e-value: 2.4E-17
score: 73.6
IPR013824DNA topoisomerase, type IA, central region, subdomain 1GENE3D1.10.460.10coord: 97..230
e-value: 4.5E-35
score: 122.8
IPR013826DNA topoisomerase, type IA, central region, subdomain 3GENE3D1.10.290.10coord: 1..42
e-value: 6.1E-9
score: 38.1
NoneNo IPR availablePANTHERPTHR11390:SF21DNA TOPOISOMERASE 3-ALPHAcoord: 1..221
IPR000380DNA topoisomerase, type IAPANTHERPTHR11390PROKARYOTIC DNA TOPOISOMERASEcoord: 1..221
IPR023405DNA topoisomerase, type IA, core domainSUPERFAMILY56712Prokaryotic type I DNA topoisomerasecoord: 2..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88025contigM-pyrifera_M_contig88025:136..825 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88025.20448.1mRNA_M-pyrifera_M_contig88025.20448.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig88025 136..825 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig88025.20448.1 ID=prot_M-pyrifera_M_contig88025.20448.1|Name=mRNA_M-pyrifera_M_contig88025.20448.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=230bp
KNDQAHPPIHPTKLATRAALRGEGEWPLYRYVTRRFLAACSQDAKGNETT
LTVDAGGERFSATGLVVLERNFLDVFPYERWNARSLPALELGATLDPAQT
DLQLTDSETRPPTLLTESELIARMDREGIGTDATIADHIKTVQDRKYVFK
DGSYLTPSSFGMGLYRAYERIGVALCKPYLRREMERDCQAVADGRKQAPA
VVRECVGSMHQVYDLVRARRSIIIDSVKAF
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013497Topo_IA_cen
IPR003602Topo_IA_DNA-bd_dom
IPR013824Topo_IA_cen_sub1
IPR013826Topo_IA_cen_sub3
IPR000380Topo_IA
IPR023405Topo_IA_core_domain