prot_M-pyrifera_M_contig8802.20444.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8802.20444.1
Unique Nameprot_M-pyrifera_M_contig8802.20444.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length685
Homology
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BLAST of mRNA_M-pyrifera_M_contig8802.20444.1 vs. uniprot
Match: D8LCK1_ECTSI (Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK1_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 4.400e-22
Identity = 94/115 (81.74%), Postives = 99/115 (86.09%), Query Frame = 0 
Query:  571 KLSDHEKTKAALEDALDSTTLGDLWFEHGELKEARYEHLRALRIRMAKLPAGHRDVAESLESLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNLAVSLKGQPGK 685
            + S  +K+K AL DALDST LGDLWFE GELKEARYEHLRALRIR A+LP GH D+AESLESLG     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNLAVSLKGQ GK
Sbjct:  112 EFSAQQKSKTALADALDSTILGDLWFERGELKEARYEHLRALRIRSARLPPGHPDIAESLESLGNVAIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNLAVSLKGQAGK 226
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BLAST of mRNA_M-pyrifera_M_contig8802.20444.1 vs. uniprot
Match: A0A6H5JQC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQC7_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 9.880e-19
Identity = 87/113 (76.99%), Postives = 91/113 (80.53%), Query Frame = 0 
Query:  573 SDHEKTKAALEDALDSTTLGDLWFEHGELKEARYEHLRALRIRMAKLPAGHRDVAESLESLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNLAVSLKGQPGK 685
            S  +K+K AL DALDST  GD WFE GELKEARYEHLRALRIR A+LP GH D+AESLESLG          XXXXXXXXXXXXXXXXXXXXXXXXXXXXNNLAVSLKGQ GK
Sbjct: 1559 SAQQKSKTALADALDSTIRGDQWFERGELKEARYEHLRALRIRSARLPPGHPDIAESLESLGNVAIREGNHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNLAVSLKGQAGK 1671
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8802.20444.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCK1_ECTSI4.400e-2281.74Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ect... [more]
A0A6H5JQC7_9PHAE9.880e-1976.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 625..679
e-value: 2.9E-8
score: 33.9
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 572..678
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 572..678
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 471..481
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 569..684
e-value: 5.0E-22
score: 80.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 588..680

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8802contigM-pyrifera_M_contig8802:498..7236 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8802.20444.1mRNA_M-pyrifera_M_contig8802.20444.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8802 498..7248 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8802.20444.1 ID=prot_M-pyrifera_M_contig8802.20444.1|Name=mRNA_M-pyrifera_M_contig8802.20444.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=685bp
MHVLQAAYVRSVARGRLDLMKTLDQRREAALSVVGPGGLSAALAAATAVA
ASTVGSNQGSGCGGSGGGGGGCGRGALGMHRGASSPLGTPASTRHTNGRP
SPASVAATAAAAATTTSIISTAFSTPGGGDYPGATVYNSSGSGGGGGSGS
VGERGTADGGRGADTMSGSDASGTCYSEDVLVRAGAAAADGRALPMPSSC
GAESTGGGGGGGRRDGRGGPGATSGSRAASAAAKKRDKEKMDAATAAAAA
AGFPVAWAWPGAAAANGRTSRGTGAKGVRAGVGVGAGGGAGAGAFPPTIP
APTGLVGGSGTGGDDYGYGYTDPGSGVSPGGGAVNRAYRGQVPGAIGAGN
GRLSLGIGVGGERPGFPGGIGGGGGGGGGVSPGGGGASPGGGRDSRMAFV
FSSTGDQQITMVGGTGGGGGIVPRARTPRGGGGSGSVGRGLTPNRSASLS
RLSTTESPGESDGRRRGSVPPPPPPPPPPPPATEASVAAAAGKGGKNQER
EQDRGQGRGRGGASGGGGDLVGAEAILEAGAGMEKGGLPRRRRHRSRDGG
GDAGEERGGGGGGGRAKGRVKLSDHEKTKAALEDALDSTTLGDLWFEHGE
LKEARYEHLRALRIRMAKLPAGHRDVAESLESLGNVAIREGNHLEAEGLH
RRALGMRVRVLGQDHMDVAATLNNLAVSLKGQPGK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf