prot_M-pyrifera_M_contig8785.20411.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8785.20411.1
Unique Nameprot_M-pyrifera_M_contig8785.20411.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length235
Homology
BLAST of mRNA_M-pyrifera_M_contig8785.20411.1 vs. uniprot
Match: D7G4G6_ECTSI (Telomerase reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G6_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 1.300e-30
Identity = 114/303 (37.62%), Postives = 135/303 (44.55%), Query Frame = 0
Query:    1 RQAVGIPQGSVLSGLLCN-FFFGYIEKRLLGDILDSPPLSAP--PPTSSVKRDVPV----MNRFNDSLE--TSSNGDGVRPCY--------GRDAETSA------------------------ARFSGGCSRSSPWGVGESGLGTGARAAAGAESDCTSRLPGKTCGTAEAISDVSHGEGGAYSSACRSQREHPCEASS----------------------GETCGRRRTREDEDGGAS------GGGRPPFPHPEGDCTLLRQVDDFLLVTTSKEKAMAFVSAMHDKAKTGEWGFSVHEAKV 234
            +QAVGIPQGSVLSGLLCN FFFG+IEKRLLGD+LD      P  PP     R +      + R +D +   + S G+G    +        GR  E                           AR S  CSR          LG     AA  +SD  SR           +  V +G GG  S   R   E P + S                       GE C      +DE  G         GG  PFP PEGDCTLLRQVDDFLL++TSK KA +FV  MHD+ KTG+WGFSVH+AK 
Sbjct:   26 QQAVGIPQGSVLSGLLCNYFFFGHIEKRLLGDVLDGGVPERPHRPPGGGGARGLSARAVGLERRSDGIGGGSGSQGEGATSSFAPPAGGKRGRPGERXXXXXXXXXXXXXXXXXXXGERPPKFARISPACSR----------LGD----AAAPDSDRASR---------GGVLGVPNGRGGGGSDGNRGPHETPQQQSCRNTANQNGRGHGSYGPVGGPHRGERCRLGGNGDDEQRGRGPAEREESGGESPFPDPEGDCTLLRQVDDFLLISTSKAKAESFVRVMHDEVKTGDWGFSVHQAKT 305          
BLAST of mRNA_M-pyrifera_M_contig8785.20411.1 vs. uniprot
Match: D7FKS8_ECTSI (Telomerase reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKS8_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 5.720e-30
Identity = 115/311 (36.98%), Postives = 136/311 (43.73%), Query Frame = 0
Query:    1 RQAVGIPQGSVLSGLLCN-FFFGYIEKRLLGDILDSPPLSAP--PPTSSVKRDVPV----MNRFNDSLE--TSSNGDGVRPCY--------GRDAETSA--------------------------ARFSGGCSRSSPWGVGESGLGTGARAAAGAESDCTSRLPGKTCGTAEAISDVSHGEGGAYSSACRSQREHPCEASS----------------------GETCGRRRTREDEDGGAS------GGGRPPFPHPEGDCTLLRQVDDFLL-----VTTSKEKAMAFVSAMHDKAKTGEWGFSVHEAKVS 235
            +QAVGIPQGSVLSGLLCN FFFG+IEKRLLGD+LD      P  PP     R +      + R +D +   + S G G    +        GR  E                             AR S  CSR          LG     AA  +SD  SR           +  V +G GG  S   R   E P + S                       GE C      +DE  G         GG  PFP PEGDCTLLRQVDDFLL     ++TSK KA +FV  MHD+ KTG+WGFSVH+AKV+
Sbjct:   26 QQAVGIPQGSVLSGLLCNYFFFGHIEKRLLGDVLDGGVPERPHRPPGGGGARGLSARAVGLERRSDGIGGGSGSQGAGATSSFAPPAGGKRGRPGERXXXXXXXXXXXXXXXXXXXXXGERPPKFARISPACSR----------LGD----AAAPDSDRASR---------GGVLGVPNGRGGGGSDGNRGPHETPQQQSCRNTANQNGRGHGSYGPVGGPHRGERCRLGGNGDDEQRGRGPAEREESGGESPFPDPEGDCTLLRQVDDFLLESDDGISTSKAKAESFVRVMHDEVKTGDWGFSVHQAKVT 313          
BLAST of mRNA_M-pyrifera_M_contig8785.20411.1 vs. uniprot
Match: A0A6H5K5W1_9PHAE (Telomerase reverse transcriptase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W1_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 4.550e-27
Identity = 106/306 (34.64%), Postives = 127/306 (41.50%), Query Frame = 0
Query:    1 RQAVGIPQGSVLSGLLCNFFFGYIEKRLLGDILDSPPLSAP--PPTSSVKRDVPVMNRFNDSLETSSNGDGVRPCYGRDAETSAARFSGGCSRSSPWGVGESGLGTGARAAAGAESD-----------------------------------------CTS--RLPGKTCGTAEAISDVSHGEGGAYSSACRSQREHPCEASSGETC---GRRRTREDEDGGASGGGR------------------------PPFPHPEGDCTLLRQVDDFLLVTTSKEKAMAFVSAMHDKAKTGEWGFSVHEAKV 234
            +QAVGIPQGSVLSGLLCN+FFG+IEKRLLGD+LD      P  PP     R +        ++   S  DG+    G   E +A+ F               G  TG + A   E +                                         C S    P     +   +  V  G  G  S   R   E P + S   T    GR        GGA GG R                         PFP PEGDCTLLRQVDDFLL++TSK KA +FV  MHD+ KTG+WGFSVH+AK 
Sbjct:  103 QQAVGIPQGSVLSGLLCNYFFGHIEKRLLGDVLDGGVPERPHLPPGGGGARGLSSR-----AVGLESRSDGIGAGSGGQDEGAASSF---------------GPPTGGKRARPGERERXXXXXPVTXXXXXXXXXXXXXXXXXGERPPKFARISPSCSCLSDAAAPDSDRASRGGVLGVPTGRDGGGSDGNRGPHETPQQQSRRNTANQNGRGHGSYGPVGGARGGERCRLGGDVDDGQRGRSPVEEESGEERPFPDPEGDCTLLRQVDDFLLISTSKAKAESFVRVMHDEVKTGDWGFSVHQAKT 388          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8785.20411.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G4G6_ECTSI1.300e-3037.62Telomerase reverse transcriptase n=1 Tax=Ectocarpu... [more]
D7FKS8_ECTSI5.720e-3036.98Telomerase reverse transcriptase n=1 Tax=Ectocarpu... [more]
A0A6H5K5W1_9PHAE4.550e-2734.64Telomerase reverse transcriptase n=1 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003545Telomerase reverse transcriptasePANTHERPTHR12066TELOMERASE REVERSE TRANSCRIPTASEcoord: 1..234
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..235
score: 10.208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8785contigM-pyrifera_M_contig8785:10490..11194 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8785.20411.1mRNA_M-pyrifera_M_contig8785.20411.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8785 10490..11194 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8785.20411.1 ID=prot_M-pyrifera_M_contig8785.20411.1|Name=mRNA_M-pyrifera_M_contig8785.20411.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=235bp
RQAVGIPQGSVLSGLLCNFFFGYIEKRLLGDILDSPPLSAPPPTSSVKRD
VPVMNRFNDSLETSSNGDGVRPCYGRDAETSAARFSGGCSRSSPWGVGES
GLGTGARAAAGAESDCTSRLPGKTCGTAEAISDVSHGEGGAYSSACRSQR
EHPCEASSGETCGRRRTREDEDGGASGGGRPPFPHPEGDCTLLRQVDDFL
LVTTSKEKAMAFVSAMHDKAKTGEWGFSVHEAKVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003545Telomerase_RT
IPR000477RT_dom