prot_M-pyrifera_M_contig8779.20392.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8779.20392.1
Unique Nameprot_M-pyrifera_M_contig8779.20392.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length68
Homology
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BLAST of mRNA_M-pyrifera_M_contig8779.20392.1 vs. uniprot
Match: D8LGL5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGL5_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 3.790e-38
Identity = 59/68 (86.76%), Postives = 64/68 (94.12%), Query Frame = 0 
Query:    1 MAILMKHKMLIFWMIMLGFIAFGAWHSEDMETAYWAMWTVPIIFLFVWLLFDCIFVNDKAFIFDHDYE 68
            MAI  KHK+LIFW+IML FIAFGAWHSEDMET +WAMWTVPIIFLFVWLLFDCIFV+DKAF+FDHDYE
Sbjct:    1 MAIQTKHKLLIFWIIMLSFIAFGAWHSEDMETPFWAMWTVPIIFLFVWLLFDCIFVDDKAFVFDHDYE 68
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BLAST of mRNA_M-pyrifera_M_contig8779.20392.1 vs. uniprot
Match: A0A836CKG6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKG6_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 6.590e-19
Identity = 40/70 (57.14%), Postives = 53/70 (75.71%), Query Frame = 0 
Query:    1 MAILMKHKMLIFWMIMLGFIAFGAWHS-EDMETAYWAMWTVPIIFLFVWLLFDCIFVND-KAFIFDHDYE 68
            MA+  +HK++   +I    +AF AW++ +D  TA+WAMWTVPI+FL  WLL DC+FV+D KAFIFDHDYE
Sbjct:    1 MAVYGRHKLITLLIIXXXXVAFAAWNNTDDNNTAWWAMWTVPIMFLSFWLLMDCMFVSDDKAFIFDHDYE 70
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8779.20392.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGL5_ECTSI3.790e-3886.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CKG6_9STRA6.590e-1957.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..8
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..68
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 9..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..51
NoneNo IPR availableTMHMMTMhelixcoord: 10..27
NoneNo IPR availableTMHMMTMhelixcoord: 34..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8779contigM-pyrifera_M_contig8779:9895..10098 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8779.20392.1mRNA_M-pyrifera_M_contig8779.20392.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8779 9895..10098 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8779.20392.1 ID=prot_M-pyrifera_M_contig8779.20392.1|Name=mRNA_M-pyrifera_M_contig8779.20392.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=68bp
MAILMKHKMLIFWMIMLGFIAFGAWHSEDMETAYWAMWTVPIIFLFVWLL
FDCIFVNDKAFIFDHDYE
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