prot_M-pyrifera_M_contig86629.20152.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig86629.20152.1
Unique Nameprot_M-pyrifera_M_contig86629.20152.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length70
Homology
BLAST of mRNA_M-pyrifera_M_contig86629.20152.1 vs. uniprot
Match: L1JPL8_GUITC (Uracil-DNA glycosylase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JPL8_GUITC)

HSP 1 Score: 98.6 bits (244), Expect = 5.600e-24
Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = 0
Query:    1 ENIYKELEEDPAVPFTRPSHGFLQAWAEQGVLLLNTALTVQRSRANSHQGKGWEQFTDCVIKTVNSELKG 70
            +N++KEL EDP + F RP+HG L  WA+QGVLLLNT LTV+  +ANSHQG+GWE+FTD VI  +N   KG
Sbjct:   88 QNMFKELTEDPKLEFKRPNHGCLTRWADQGVLLLNTCLTVRSGQANSHQGRGWEKFTDAVISELNKNHKG 157          
BLAST of mRNA_M-pyrifera_M_contig86629.20152.1 vs. uniprot
Match: A0A561QX76_9HYPH (Uracil-DNA glycosylase n=1 Tax=Neorhizobium alkalisoli TaxID=528178 RepID=A0A561QX76_9HYPH)

HSP 1 Score: 97.1 bits (240), Expect = 2.690e-23
Identity = 45/68 (66.18%), Postives = 54/68 (79.41%), Query Frame = 0
Query:    2 NIYKELEEDPAVPFTRPSHGFLQAWAEQGVLLLNTALTVQRSRANSHQGKGWEQFTDCVIKTVNSELK 69
            NIYKE+E D  +P  R  HGFL+ WA+QGVLLLN+ LTV+ SRA +HQGKGWEQFTD VI+TVN E +
Sbjct:   96 NIYKEMESDLGIPPAR--HGFLEHWAQQGVLLLNSVLTVEESRAAAHQGKGWEQFTDAVIRTVNEECE 161          
BLAST of mRNA_M-pyrifera_M_contig86629.20152.1 vs. uniprot
Match: A0A4R3G0B8_9HYPH (Uracil-DNA glycosylase n=2 Tax=Rhizobium/Agrobacterium group TaxID=227290 RepID=A0A4R3G0B8_9HYPH)

HSP 1 Score: 97.1 bits (240), Expect = 2.870e-23
Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 0
Query:    2 NIYKELEEDPAVPFTRPSHGFLQAWAEQGVLLLNTALTVQRSRANSHQGKGWEQFTDCVIKTVNSE 67
            NIYKE+E D  +P  R  HGFL++WA+QGVLLLN+ LTV+ SRA SHQGKGWE+FTD VI+TVN E
Sbjct:   96 NIYKEMESDLGIPPAR--HGFLESWAKQGVLLLNSVLTVEESRAASHQGKGWERFTDAVIRTVNDE 159          
BLAST of mRNA_M-pyrifera_M_contig86629.20152.1 vs. uniprot
Match: A0A346YNK7_9HYPH (Uracil-DNA glycosylase n=2 Tax=Rhizobium/Agrobacterium group TaxID=227290 RepID=A0A346YNK7_9HYPH)

HSP 1 Score: 96.3 bits (238), Expect = 5.350e-23
Identity = 45/69 (65.22%), Postives = 53/69 (76.81%), Query Frame = 0
Query:    2 NIYKELEEDPAVPFTRPSHGFLQAWAEQGVLLLNTALTVQRSRANSHQGKGWEQFTDCVIKTVNSELKG 70
            NIYKE+E D  +P  R  HGFL+ WAEQGVLLLN+ LTV+  RA +HQGKGWE+FTD VI+TVN E  G
Sbjct:   96 NIYKEMEADLGIPPAR--HGFLEHWAEQGVLLLNSVLTVEEGRAAAHQGKGWERFTDAVIRTVNDECDG 162          
BLAST of mRNA_M-pyrifera_M_contig86629.20152.1 vs. uniprot
Match: UPI001CA79C3F (uracil-DNA glycosylase n=1 Tax=Sphingomonas colocasiae TaxID=1848973 RepID=UPI001CA79C3F)

HSP 1 Score: 95.9 bits (237), Expect = 7.230e-23
Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 0
Query:    2 NIYKELEEDPAVPFTRPSHGFLQAWAEQGVLLLNTALTVQRSRANSHQGKGWEQFTDCVIKTVN 65
            NIYKELE D  +P  RP+HGFL+ WAEQGVLLLN  LTV+ +RA +HQGKGWE+FTD VIK VN
Sbjct:   95 NIYKELESDLGLP--RPNHGFLEHWAEQGVLLLNAVLTVEMARAAAHQGKGWERFTDAVIKLVN 156          
BLAST of mRNA_M-pyrifera_M_contig86629.20152.1 vs. uniprot
Match: A0A2W4CMK3_9HYPH (Uracil-DNA glycosylase n=1 Tax=Rhizobium tubonense TaxID=484088 RepID=A0A2W4CMK3_9HYPH)

HSP 1 Score: 95.9 bits (237), Expect = 8.030e-23
Identity = 44/66 (66.67%), Postives = 54/66 (81.82%), Query Frame = 0
Query:    2 NIYKELEEDPAVPFTRPSHGFLQAWAEQGVLLLNTALTVQRSRANSHQGKGWEQFTDCVIKTVNSE 67
            NIYKE++ D  +P  R  HGFL++WA+QGVLLLN+ LTV+ SRA SHQGKGWE+FTD VI+TVN E
Sbjct:   96 NIYKEMQSDLGIPPAR--HGFLESWAKQGVLLLNSVLTVEESRAASHQGKGWERFTDAVIRTVNDE 159          
BLAST of mRNA_M-pyrifera_M_contig86629.20152.1 vs. uniprot
Match: A0A1I2U9S8_9GAMM (Uracil-DNA glycosylase n=1 Tax=Neptunomonas qingdaonensis TaxID=1045558 RepID=A0A1I2U9S8_9GAMM)

HSP 1 Score: 95.9 bits (237), Expect = 9.070e-23
Identity = 46/68 (67.65%), Postives = 53/68 (77.94%), Query Frame = 0
Query:    2 NIYKELEEDPAVPFTRPSHGFLQAWAEQGVLLLNTALTVQRSRANSHQGKGWEQFTDCVIKTVNSELK 69
            NIYKELE D A+P  R  HG+L++WA+QGVLLLN  LTVQ S A SHQGKGWEQFTD VI+ VN E +
Sbjct:   92 NIYKELESDLAIP--RAEHGYLESWAQQGVLLLNAVLTVQDSNAASHQGKGWEQFTDKVIEVVNRECE 157          
BLAST of mRNA_M-pyrifera_M_contig86629.20152.1 vs. uniprot
Match: A0A418V999_9DEIO (Uracil-DNA glycosylase n=2 Tax=Deinococcus TaxID=1298 RepID=A0A418V999_9DEIO)

HSP 1 Score: 95.9 bits (237), Expect = 1.020e-22
Identity = 46/66 (69.70%), Postives = 53/66 (80.30%), Query Frame = 0
Query:    2 NIYKELEEDPAVP-FTRPSHGFLQAWAEQGVLLLNTALTVQRSRANSHQGKGWEQFTDCVIKTVNS 66
            NIYKEL ED  +P FT P HG+L+AWAEQGVLLLN  LTV+  +ANSHQGKGWE FTD VI+ VN+
Sbjct:  109 NIYKELRED--IPGFTPPRHGYLRAWAEQGVLLLNAVLTVREGQANSHQGKGWETFTDAVIRAVNA 172          
BLAST of mRNA_M-pyrifera_M_contig86629.20152.1 vs. uniprot
Match: A0A2E9SQ09_9GAMM (Uracil-DNA glycosylase n=2 Tax=Spongiibacter TaxID=630749 RepID=A0A2E9SQ09_9GAMM)

HSP 1 Score: 95.5 bits (236), Expect = 1.040e-22
Identity = 40/69 (57.97%), Postives = 57/69 (82.61%), Query Frame = 0
Query:    2 NIYKELEEDPAVPFTRPSHGFLQAWAEQGVLLLNTALTVQRSRANSHQGKGWEQFTDCVIKTVNSELKG 70
            NI++ELE+D  +P  RPSHG+LQ+WAEQGVLLLN+ LTV++ +A +HQG+GWE+FTD V+  +N + +G
Sbjct:   95 NIFQELEQDEGIP--RPSHGYLQSWAEQGVLLLNSVLTVEQGQAGAHQGRGWERFTDAVVDALNRDREG 161          
BLAST of mRNA_M-pyrifera_M_contig86629.20152.1 vs. uniprot
Match: N6V2C1_9HYPH (Uracil-DNA glycosylase n=44 Tax=Rhizobium/Agrobacterium group TaxID=227290 RepID=N6V2C1_9HYPH)

HSP 1 Score: 95.5 bits (236), Expect = 1.130e-22
Identity = 45/69 (65.22%), Postives = 54/69 (78.26%), Query Frame = 0
Query:    2 NIYKELEEDPAVPFTRPSHGFLQAWAEQGVLLLNTALTVQRSRANSHQGKGWEQFTDCVIKTVNSELKG 70
            NIYKELE D  +P  R  HGFL++WA+QGVLLLN+ LTV+ S+A SHQGKGWE+FTD VI+ VN E  G
Sbjct:   96 NIYKELETDLGIPPAR--HGFLESWAKQGVLLLNSVLTVEESQAASHQGKGWERFTDAVIRRVNDECDG 162          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86629.20152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L1JPL8_GUITC5.600e-2461.43Uracil-DNA glycosylase n=1 Tax=Guillardia theta (s... [more]
A0A561QX76_9HYPH2.690e-2366.18Uracil-DNA glycosylase n=1 Tax=Neorhizobium alkali... [more]
A0A4R3G0B8_9HYPH2.870e-2368.18Uracil-DNA glycosylase n=2 Tax=Rhizobium/Agrobacte... [more]
A0A346YNK7_9HYPH5.350e-2365.22Uracil-DNA glycosylase n=2 Tax=Rhizobium/Agrobacte... [more]
UPI001CA79C3F7.230e-2370.31uracil-DNA glycosylase n=1 Tax=Sphingomonas coloca... [more]
A0A2W4CMK3_9HYPH8.030e-2366.67Uracil-DNA glycosylase n=1 Tax=Rhizobium tubonense... [more]
A0A1I2U9S8_9GAMM9.070e-2367.65Uracil-DNA glycosylase n=1 Tax=Neptunomonas qingda... [more]
A0A418V999_9DEIO1.020e-2269.70Uracil-DNA glycosylase n=2 Tax=Deinococcus TaxID=1... [more]
A0A2E9SQ09_9GAMM1.040e-2257.97Uracil-DNA glycosylase n=2 Tax=Spongiibacter TaxID... [more]
N6V2C1_9HYPH1.130e-2265.22Uracil-DNA glycosylase n=44 Tax=Rhizobium/Agrobact... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036895Uracil-DNA glycosylase-like domain superfamilyGENE3D3.40.470.10coord: 1..70
e-value: 9.3E-26
score: 92.7
IPR036895Uracil-DNA glycosylase-like domain superfamilySUPERFAMILY52141Uracil-DNA glycosylase-likecoord: 2..68
IPR002043Uracil-DNA glycosylase family 1PANTHERPTHR11264URACIL-DNA GLYCOSYLASEcoord: 1..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86629contigM-pyrifera_M_contig86629:175..384 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86629.20152.1mRNA_M-pyrifera_M_contig86629.20152.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig86629 175..384 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig86629.20152.1 ID=prot_M-pyrifera_M_contig86629.20152.1|Name=mRNA_M-pyrifera_M_contig86629.20152.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=70bp
ENIYKELEEDPAVPFTRPSHGFLQAWAEQGVLLLNTALTVQRSRANSHQG
KGWEQFTDCVIKTVNSELKG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036895Uracil-DNA_glycosylase-like_sf
IPR002043UDG_fam1