prot_M-pyrifera_M_contig86245.20094.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig86245.20094.1
Unique Nameprot_M-pyrifera_M_contig86245.20094.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length280
Homology
BLAST of mRNA_M-pyrifera_M_contig86245.20094.1 vs. uniprot
Match: A0A7X5WRR1_9ACTN (PH domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WRR1_9ACTN)

HSP 1 Score: 186 bits (473), Expect = 7.460e-53
Identity = 128/290 (44.14%), Postives = 173/290 (59.66%), Query Frame = 0
Query:    3 QARSIALSRIQQVSVGEPLVARVVGLAVVEVAEASSDGDIEIRYLARSDAAALTTRLRALARRGEPVPDDTGPTSSLAAPPDPPAVVLHTSTTSTLVRHNLGTVAPGLV--ALGVVGLVVVVVLALGPGFAVAGPAAA----------VLVAVMVMVATFSTIAVVLTNGDFRLARSTRSLQVESGLLSRRQIEVRPERIQTITVSSGPVVRRMGLHQIAFSAATGKASSQNNAIVHLSPAVSTDEVAKIVQGSVDVDPAFGVELEPVNAVTVRRQLVRSAVVYALVLLP 280
            QAR+I L RIQQV+V +P++ARV GLA V+++EAS+DGD+ I YL    A  LT  LR+LAR  +  P D  P + +++ P PP +VLH + T  LVR+ L    PGL   AL VV               V G A+A              V+V     S I  + T G F L+R  R L V+ GLLSRR +EVRP+RIQT+TV+SGP+ RR+ LHQ+ FSAA G A+ Q   + HL PAV TD+V  ++Q ++D++       EPV+ +TVRR L R+A  +A+ LLP
Sbjct:    1 QARTIPLDRIQQVAVAQPVIARVFGLAAVQISEASADGDVAISYLGLGPANELTATLRSLARTRDAAPPD-DPVTPVSSLPPPP-MVLHRTDTGDLVRYQLAVRTPGLAVGALVVVXXXXXXXXXXXXXXGVLGGASAGGXXXXXXXXXGTVVVVGSVAMSAIGPIFTLGGFELSRGDRGLTVDMGLLSRRHLEVRPDRIQTVTVTSGPIARRLDLHQVVFSAAVGTAAGQGQ-VTHLGPAVRTDDVDHLLQRALDLESGLSTSFEPVSGLTVRRFLFRAAGAWAVTLLP 287          
BLAST of mRNA_M-pyrifera_M_contig86245.20094.1 vs. uniprot
Match: A0A2D6EGB8_9SPHN (Uncharacterized protein n=1 Tax=Croceicoccus sp. TaxID=1927144 RepID=A0A2D6EGB8_9SPHN)

HSP 1 Score: 73.9 bits (180), Expect = 3.280e-11
Identity = 86/276 (31.16%), Postives = 129/276 (46.74%), Query Frame = 0
Query:    1 NRQARSIALSRIQQVSVGEPLVARVVGLAVVEVAEASSDGD-IEIRYLARSDAAALTTRLRALARRGEPVPDDTGPTSSLAAPPDPPAVVLHTSTTSTLVRHNLGTVAP------GLVALGVVGLVVVVVLALGP-----------------------GFAVAGPAAAVLVAVMVMVATFST--IAVVLTNGDFRLARSTRSLQVESGLLSRRQIEVRPERIQTITVSSGPVVRRMGLHQIAFSAATGKASSQNNAIVHLSPAVSTDEVAKIVQGS 244
            +R+ARS+   RIQ VS+ EPL+AR++GL  V     +   D IE+ Y+ R++      RLRA+ RR    P +TG   ++A     PA       + TL   +LG V         LV LGV+G  +  +  L P                       GFA A    AVL AV ++V    T  +  VL + DFRL R+ R  +   GLL+R  + +   R+Q   +++G V RR G H + F +    A S ++ +V   P    DE+A + + +
Sbjct:  106 SREARSVPYERIQDVSIAEPLLARLLGLVSVTFETGAGGKDEIELAYVTRAEG----ERLRAVVRRQRETPVETGAAGAVA-----PADAAE-EPSETLFAMDLGRVVHFGLFEFSLVVLGVIGAALQQLDFLLPFDIWSADFWTDLFAVQTDTLRHWGFA-AQIFGAVLAAVSLLVLGVVTGVVRTVLRDYDFRLERTERGFRRRRGLLNRTDVVMPVHRVQAGVLATGLVRRRFGWHSLKFVSLANDAKSASHDVV---PFAQPDEIAPVARAA 367          
BLAST of mRNA_M-pyrifera_M_contig86245.20094.1 vs. uniprot
Match: UPI001E3AFBD8 (PH domain-containing protein n=2 Tax=unclassified Croceicoccus TaxID=2629967 RepID=UPI001E3AFBD8)

HSP 1 Score: 65.5 bits (158), Expect = 2.210e-8
Identity = 77/273 (28.21%), Postives = 123/273 (45.05%), Query Frame = 0
Query:    1 NRQARSIALSRIQQVSVGEPLVARVVGLAVVEVAEASSDGD-IEIRYLARSDAAALTTRLRALARRGEPVPD---DTGPTSSLAAPPDPPAVVLHTSTTSTLVRHNLGTVAPGLVALGVVGLVVVVVLALGP-----------------------GFAVAGPAAAVLVAVMVMVATFST--IAVVLTNGDFRLARSTRSLQVESGLLSRRQIEVRPERIQTITVSSGPVVRRMGLHQIAFSAATGKASSQNNAIVHLSPAVSTDEVAKIVQGS 244
            +R+ARS+   RIQ VS+ EPL+AR++GL  V     +   D I + Y+ R++      RLRA+ RR    P    D    + L+APP+ PA  L       ++  + G     LV L  +G  +     L P                       GF +A    AVL    ++V   +T  +  VL + DFRL ++ R  +   GLL+R  + +   R+Q   +++G V R  G H +AF +    A S ++ +    P    DE+A + + +
Sbjct:   92 SREARSVPYERIQDVSIAEPLLARLLGLVSVTFETGAGGKDEISLAYVTRAEG----ERLRAVVRRQHEAPRAAVDAPADTKLSAPPETPAQTLFAMDLKRVL--HFGVFEFSLVVLAAIGAALQQFDFLLPFDIWSARFWTGLFEVQADTIRHWGF-IAQALGAVLAVASLLVLGVATGVVRTVLRDYDFRLEKTDRGFRRRRGLLNRTDVVMPVHRVQAGVLATGLVRRWFGWHSLAFVSLANDAKSASHDVA---PFAQPDEIAPVARAA 354          
BLAST of mRNA_M-pyrifera_M_contig86245.20094.1 vs. uniprot
Match: A0A838KLE4_9ACTN (PH domain-containing protein n=1 Tax=Nocardioidaceae bacterium TaxID=1871072 RepID=A0A838KLE4_9ACTN)

HSP 1 Score: 60.1 bits (144), Expect = 1.290e-6
Identity = 73/250 (29.20%), Postives = 120/250 (48.00%), Query Frame = 0
Query:    2 RQARSIALSRIQQVSVGEPLVARVVGLAVVEV-AEASSDGDIEIRYLARSDAAALTTRLRALARRGEPVPDDTGPTSSLAAPPDPPAVVLHTSTTSTLVRHNLGTVAPGLVALGVVGLVVVVVLAL-GPGFAV-AGPAAAVLVAVMVMVATFSTIAVVLTNGDFRLARSTRSLQVESGLLSRRQIEVRPERIQTITVSSGPVVRRMGLHQIAFSAATGKASSQNNAIVHLSPAVSTDEVAKIVQGSVDVD 248
            RQ   I L+R+Q V V +PL ARV+GLAV+++   A  D  + + YL+  DA ++   +     R  P   + G   +L        +V   STT  +    L +V+  ++A  VV +V VVV+ + G G A+ AG +  V V + ++V     +A +L + DFRL R+   ++V +GL S     +  +RIQ + +    + RR+G  ++    A    S+Q      L P         +V+    VD
Sbjct:  116 RQRSQIRLNRVQSVDVNQPLFARVLGLAVLQLDMAAGDDASVSLAYLSVKDAWSVREEII----RHTPNAPEVG---ALVGEHREDELVAQVSTTRLVQATLLESVS--VLAFFVVWIVAVVVIGIVGSGQALLAGLSGIVPVTIAILVQLRKVLASILRDADFRLYRTPTGIRVSAGLTSTVNRTIDTDRIQGVRLEEPFLWRRLGWARVEVDVAGAADSTQ---AARLMPVADRPAALALVRSVTGVD 353          
BLAST of mRNA_M-pyrifera_M_contig86245.20094.1 vs. uniprot
Match: Q9HQ31_HALSA (DUF304 domain protein n=10 Tax=Halobacterium TaxID=2239 RepID=Q9HQ31_HALSA)

HSP 1 Score: 57.4 bits (137), Expect = 1.050e-5
Identity = 85/279 (30.47%), Postives = 129/279 (46.24%), Query Frame = 0
Query:    1 NRQARSIALSRIQQVSVGEPLVARVVGLAVVEVAEASSDGDIE--IRYLARSDAAALTTRLRALARRGEP----------VPDDTGPTSSLAAPPD----PPAV-----VLHTSTTSTLVRHNLGTVAPGLVALGVVGLVVVVVLALGPGFAVAGPAAAVLVAVMVMVA-----TFSTIAVVLTNGDFRLARSTRSLQVESGLLSRRQIEVRPERIQTITVSSGPVVRRMGLHQIAFSAATGKASSQN-----NAIVHLSPAVSTDEVAKIVQGSVDVD 248
            +R+ R I L R+Q V V   LVAR++GLAVV+V E +  G  E  +R+++R  AA L   +R   RR  P           PD  G  S   +  D    P  V     +L   +   L+ + L +  P L + G++ +  V   +LG   AV      VLVA  V +A       + + VV   G FRL R    L+ E GL  RR   +   ++QT++V    ++RR G   +A   A G A  Q+      A V ++P  +  E+A+ ++   D+D
Sbjct:   80 SRREREIPLRRVQNVDVTRSLVARLLGLAVVDV-ETAGGGSTEASLRFVSREAAADLQADVRT--RRTTPGDAADAATAATPDAGGADSESRSAADRAREPTPVGERGELLFALSNRDLLLYGLLSFNPRLFS-GIIAVATVAAPSLGGRMAVPDVGMVVLVAGAVALALGVWLVSAAVRVVQFYG-FRLRRVGGDLRYERGLFERRDGTIPLSKLQTVSVEDSVLMRRYGFASLAVETA-GYAPGQSPSGGSEAAVPIAPRAAVFELAREIEPVADID 352          
BLAST of mRNA_M-pyrifera_M_contig86245.20094.1 vs. uniprot
Match: UPI001D0EE99C (PH domain-containing protein n=2 Tax=unclassified Cellulomonas TaxID=2620175 RepID=UPI001D0EE99C)

HSP 1 Score: 57.0 bits (136), Expect = 1.440e-5
Identity = 70/251 (27.89%), Postives = 110/251 (43.82%), Query Frame = 0
Query:    2 RQARSIALSRIQQVSVGEPLVARVVGLAVVEVAEASSDGD-IEIRYLARSDAAALTTRLRALA-----RRGEPVPDDTGPTSSLA---APPDPPAVVLHTSTTST---------------LVRHNLGTVAPGLVALGVVGLVVVVVLALGPGFAVAGPAAAVLVAVMVMVATFSTI-AVVLTNGDFRLARSTRSLQVESGLLSRRQIEVRPERIQTITVSSGPVVRRMGLHQIAFSAATGKASSQNNAIVH 227
            RQ R   L R+Q V V +PL+AR++GLA + +  A   G  +++ +L  S+A AL T++ ALA     RR     D    T+ LA     PD P  V                       L+   L +V P  + + VVG+VV        G  ++G    + V V  +V     +   + T   FR A S   +++  GL   R   V P R+Q +++S GP+ R     ++  + A   A S   +++H
Sbjct:  106 RQQRQARLDRLQAVDVVQPLLARLLGLAQLNLEVAGGTGSAVQLAFLRESEATALRTQILALAAGLGPRRAPAAGDPDVATAGLAPDGTAPDAPGTVXXXXXXXXXXXXXXXXXXLPMPRLIGSILRSVPPWFLLVVVVGVVV--------GSILSGDVGGMFVLVPAVVGAGGYVWGRINTGATFRAAVSPDGIRLRHGLTETRTQTVPPGRVQAVSISQGPLWRGADWWKVEINVAGYGAESATESVLH 348          
BLAST of mRNA_M-pyrifera_M_contig86245.20094.1 vs. uniprot
Match: UPI00073F0AC8 (PH domain-containing protein n=1 Tax=Halobacterium TaxID=2239 RepID=UPI00073F0AC8)

HSP 1 Score: 55.8 bits (133), Expect = 3.280e-5
Identity = 71/229 (31.00%), Postives = 103/229 (44.98%), Query Frame = 0
Query:    1 NRQARSIALSRIQQVSVGEPLVARVVGLAVVEVAEASSDG-DIEIRYLARSDAAALTTRLRALARRGEPVPDDTGPTSSLAAPPDPPAV---VLHTSTTSTLVRHNLGTVAPGLVALGVVGLVVVVVLALGPGFAVAGPAAAVLVAVMVMVA----TFSTIAVVLTNGDFRLARSTRSLQVESGLLSRRQIEVRPERIQTITVSSGPVVRRMGLHQIAFSAATGKASSQ 221
            +R+ R I L R+Q V V    VAR++GLA V+V  A   G +  +R++ R +A     RL+   R         G  S  A   D  AV    L   +   L+ +   +  P L A GVV L   +    G   +++G   A +V   V+ A      ST+A V+    FRL R    L+ E GLLSRR   +   ++QT+ V    ++RR G   +A   A     SQ
Sbjct:   80 SRREREIPLRRVQNVDVTRSFVARLLGLAEVDVETAGGGGTEANLRFVGREEA----DRLQEAIREKRAALQREGAESEEADAEDAAAVDGETLFELSDRDLLLYGALSFDPRL-ASGVVALATFLAPTFGDRISLSGLGIAAIVGFAVVAALALWAASTVARVVQFYGFRLRRVGDDLRYERGLLSRRDGTIPLSKLQTVAVEENVLMRRYGFASLAVETAGYAPGSQ 303          
BLAST of mRNA_M-pyrifera_M_contig86245.20094.1 vs. uniprot
Match: A0A0U5H2D0_9EURY (DUF304 domain protein n=5 Tax=Halobacterium TaxID=2239 RepID=A0A0U5H2D0_9EURY)

HSP 1 Score: 55.5 bits (132), Expect = 4.430e-5
Identity = 82/289 (28.37%), Postives = 129/289 (44.64%), Query Frame = 0
Query:    1 NRQARSIALSRIQQVSVGEPLVARVVGLAVVEVAEASSDG-DIEIRYLARSDAAALTTRLR---ALARRGEPVPDDTGPTSSLAAPPDPPAVVLHTSTTSTLVRHNLGTVAPGLVALGVVGLVVVVVLALGPGFAVAGPAAAVLVAVMVMVA----TFSTIAVVLTNGDFRLARSTRSLQVESGLLSRRQIEVRPERIQTITVSSGPVVRRMGLHQIAFSAATGKASSQ----NNAIVHLSPAVSTDEVAKIVQGSVDVDPAFGVELEPVNAVT--VRRQLVRSAVVYA 275
            +R+ R I L R+Q V V    VAR++G+AVV+V  A   G +  +R++   +A  L   +R   A  +R E    +     + AA P      L   +   L+ +   +  P L A GVV L   +    G   +++G   A +V + V+ A      S +A ++    FRL R    L+ E GLLSRR   +   ++QT+ V    ++RR G   +A   A     SQ    + A + ++P      +A+ ++   D    F VE  P  A    VRR L+    V A
Sbjct:   80 SRREREIPLRRVQNVDVTRSFVARLLGIAVVDVETAGGGGTEANLRFVGGEEADRLQEAIREKRAALQREESA--EAASEEAEAAEPTAGGETLFELSDRDLLLYGALSFDPRL-ASGVVALATFLAPTFGDRVSLSGLGVAAVVGLAVVAALGLWAASAVARIVQFYGFRLRRVGDDLRYERGLLSRRDGTIPLSKLQTVAVEENVLMRRWGFASLAVETAGYAPGSQPSGGSEAAIPIAPREDVLSLARTLEPFHD----FEVERPPERARKRYVRRYLLAGLAVVA 361          
BLAST of mRNA_M-pyrifera_M_contig86245.20094.1 vs. uniprot
Match: A0A1I0MMQ7_9EURY (Putative membrane protein n=1 Tax=Halobacterium jilantaiense TaxID=355548 RepID=A0A1I0MMQ7_9EURY)

HSP 1 Score: 54.7 bits (130), Expect = 8.110e-5
Identity = 71/237 (29.96%), Postives = 112/237 (47.26%), Query Frame = 0
Query:    1 NRQARSIALSRIQQVSVGEPLVARVVGLAVVEVAEASSDGDIE--IRYLARSDAAALTTRLR----ALARRGE--PVPDDTGPTSSLA-----------APPDPPAVVLHTSTTSTLVRHNLGTVAPGLVALGVVGLVVVVVLALGPGFAVAGPAAAVLVAVMVMVAT----FSTIAVVLTNGDFRLARSTRSLQVESGLLSRRQIEVRPERIQTITVSSGPVVRRMGLHQIAFSAA 214
            +R+ R I L R+Q V V   LVAR++GLA V+V E +  G  E  +R+++R +A  L   +R    A  RRG+  P  D+    + LA           AP      +L   +   L+ + L +  P L++ GVV     VV +LG    +     AVL A ++++A      S +  ++    FRL R    L+ E GL  RR   +   ++QT++V    ++RR G   +A   A
Sbjct:   80 SRREREIPLRRVQNVDVTRSLVARLLGLAEVDV-ETAGGGSTEANLRFVSREEAGRLQEEVRERRAARERRGDSRPETDERDDDAELAENEVPVDDAERAPRGERGELLFELSDRDLLLYGLLSFDPRLLS-GVVAFATFVVPSLGQRVDIPNVGLAVLAAGILVLAVGIWLVSAVLRIIQFYGFRLRRVGDDLRYERGLFERRDGTIPLSKLQTVSVEENVLMRRYGFASLAVETA 314          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig86245.20094.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A7X5WRR1_9ACTN7.460e-5344.14PH domain-containing protein n=1 Tax=Actinomycetia... [more]
A0A2D6EGB8_9SPHN3.280e-1131.16Uncharacterized protein n=1 Tax=Croceicoccus sp. T... [more]
UPI001E3AFBD82.210e-828.21PH domain-containing protein n=2 Tax=unclassified ... [more]
A0A838KLE4_9ACTN1.290e-629.20PH domain-containing protein n=1 Tax=Nocardioidace... [more]
Q9HQ31_HALSA1.050e-530.47DUF304 domain protein n=10 Tax=Halobacterium TaxID... [more]
UPI001D0EE99C1.440e-527.89PH domain-containing protein n=2 Tax=unclassified ... [more]
UPI00073F0AC83.280e-531.00PH domain-containing protein n=1 Tax=Halobacterium... [more]
A0A0U5H2D0_9EURY4.430e-528.37DUF304 domain protein n=5 Tax=Halobacterium TaxID=... [more]
A0A1I0MMQ7_9EURY8.110e-529.96Putative membrane protein n=1 Tax=Halobacterium ji... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005182Domain of unknown function DUF304PFAMPF03703bPH_2coord: 2..56
e-value: 1.5E-4
score: 21.9
coord: 163..239
e-value: 7.1E-8
score: 32.5
NoneNo IPR availablePANTHERPTHR34473FAMILY NOT NAMEDcoord: 2..273
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..157
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..109
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 158..280
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..130
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 131..135
NoneNo IPR availableTMHMMTMhelixcoord: 110..132
NoneNo IPR availableTMHMMTMhelixcoord: 136..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig86245contigM-pyrifera_M_contig86245:1..840 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig86245.20094.1mRNA_M-pyrifera_M_contig86245.20094.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig86245 1..840 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig86245.20094.1 ID=prot_M-pyrifera_M_contig86245.20094.1|Name=mRNA_M-pyrifera_M_contig86245.20094.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=280bp
NRQARSIALSRIQQVSVGEPLVARVVGLAVVEVAEASSDGDIEIRYLARS
DAAALTTRLRALARRGEPVPDDTGPTSSLAAPPDPPAVVLHTSTTSTLVR
HNLGTVAPGLVALGVVGLVVVVVLALGPGFAVAGPAAAVLVAVMVMVATF
STIAVVLTNGDFRLARSTRSLQVESGLLSRRQIEVRPERIQTITVSSGPV
VRRMGLHQIAFSAATGKASSQNNAIVHLSPAVSTDEVAKIVQGSVDVDPA
FGVELEPVNAVTVRRQLVRSAVVYALVLLP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005182DUF304