prot_M-pyrifera_M_contig8368.19543.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig8368.19543.1
Unique Name	prot_M-pyrifera_M_contig8368.19543.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	92

Homology

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BLAST of mRNA_M-pyrifera_M_contig8368.19543.1 vs. uniprot
Match: D8LQX3_ECTSI (AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQX3_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 5.200e-53
Identity = 87/91 (95.60%), Postives = 90/91 (98.90%), Query Frame = 0

Query:    1 FGTYKLIYRRYAGLFFTFGMDTNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILERIRELEKLD 91
            +GTYKLIYRRYAGLFFTFGMD NDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREIL+RIRE+EKLD
Sbjct:   53 YGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILDRIREVEKLD 143

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BLAST of mRNA_M-pyrifera_M_contig8368.19543.1 vs. uniprot
Match: A0A835YZE0_9STRA (AP complex subunit sigma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZE0_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.300e-46
Identity = 77/89 (86.52%), Postives = 86/89 (96.63%), Query Frame = 0

Query:    3 TYKLIYRRYAGLFFTFGMDTNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILERIRELEKLD 91
            +YK+IYRRYAGLFFT G+D NDNELLALETVHLFVELL+SYFSNVCELDIVFNFNKVYNILDEFILSGEV+ES+K EIL+R+RELEKL+
Sbjct:   55 SYKIIYRRYAGLFFTLGVDVNDNELLALETVHLFVELLDSYFSNVCELDIVFNFNKVYNILDEFILSGEVQESAKPEILDRVRELEKLE 143

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BLAST of mRNA_M-pyrifera_M_contig8368.19543.1 vs. uniprot
Match: A0A7S2CS13_9STRA (AP complex subunit sigma n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CS13_9STRA)

HSP 1 Score: 145 bits (367), Expect = 4.790e-43
Identity = 71/91 (78.02%), Postives = 83/91 (91.21%), Query Frame = 0

Query:    1 FGTYKLIYRRYAGLFFTFGMDTNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILERIRELEKLD 91
            F  YKL+YRRYAGLFFT G+D NDNELL LET+HLFVELL+ YFSNVCELDIVFNFNKVY ILDEFIL+GE++E+SK+EILERI+E+EK +
Sbjct:   56 FMNYKLVYRRYAGLFFTIGIDVNDNELLYLETIHLFVELLDQYFSNVCELDIVFNFNKVYGILDEFILAGEIQETSKKEILERIKEVEKRE 146

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BLAST of mRNA_M-pyrifera_M_contig8368.19543.1 vs. uniprot
Match: A0A7S3L6S1_9STRA (AP complex subunit sigma n=2 Tax=Bacillariophycidae TaxID=33850 RepID=A0A7S3L6S1_9STRA)

HSP 1 Score: 140 bits (353), Expect = 7.500e-41
Identity = 68/91 (74.73%), Postives = 83/91 (91.21%), Query Frame = 0

Query:    1 FGTYKLIYRRYAGLFFTFGMDTNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILERIRELEKLD 91
            + +YKLIYRRYAGLFFT  +D  DNEL  LET+HLFVELL+SYFSNVCELDIVFNFNKVY+ILDEF+L+GE+EE+SKREIL+R++ LEK++
Sbjct:   63 YNSYKLIYRRYAGLFFTIAVDVTDNELSYLETIHLFVELLDSYFSNVCELDIVFNFNKVYSILDEFMLAGELEETSKREILDRVKMLEKME 153

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BLAST of mRNA_M-pyrifera_M_contig8368.19543.1 vs. uniprot
Match: A0A6T8NVY6_9STRA (AP complex subunit sigma n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8NVY6_9STRA)

HSP 1 Score: 139 bits (351), Expect = 1.650e-40
Identity = 68/91 (74.73%), Postives = 81/91 (89.01%), Query Frame = 0

Query:    1 FGTYKLIYRRYAGLFFTFGMDTNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILERIRELEKLD 91
            +  YKLIYRRYAGLFFT  +D  DNEL  LET+HLFVELL+SYFSNVCELDIVFNFN+VY ILDEF+L+GE+EE+SKREILER++ +EK+D
Sbjct:   66 YNNYKLIYRRYAGLFFTIAVDMTDNELNYLETIHLFVELLDSYFSNVCELDIVFNFNRVYAILDEFMLAGEIEETSKREILERVKVIEKMD 156

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BLAST of mRNA_M-pyrifera_M_contig8368.19543.1 vs. uniprot
Match: A0A7S0KX33_9STRA (AP complex subunit sigma n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KX33_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.900e-40
Identity = 69/91 (75.82%), Postives = 82/91 (90.11%), Query Frame = 0

Query:    1 FGTYKLIYRRYAGLFFTFGMDTNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILERIRELEKLD 91
            +  YKLIYRRYAGLFFT  +D+ DNEL  LETVHLFVELL+SYFSNVCELDIVF+FNKVY ILDEF+L+GE+EE+SKREILER++ LEK++
Sbjct:   59 YNNYKLIYRRYAGLFFTIAVDSTDNELSYLETVHLFVELLDSYFSNVCELDIVFHFNKVYTILDEFMLAGEMEETSKREILERVKFLEKME 149

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BLAST of mRNA_M-pyrifera_M_contig8368.19543.1 vs. uniprot
Match: A0A1Z5K077_FISSO (AP complex subunit sigma n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K077_FISSO)

HSP 1 Score: 138 bits (348), Expect = 4.070e-40
Identity = 66/91 (72.53%), Postives = 83/91 (91.21%), Query Frame = 0

Query:    1 FGTYKLIYRRYAGLFFTFGMDTNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILERIRELEKLD 91
            +  YKLIYRRYAGLFFT  +D NDNEL  LET+HLFVELL+SYF+NVCELDIVF+FNKVY+ILDEF+L+GE+EE+SKREIL+R++ L+K++
Sbjct:   61 YNNYKLIYRRYAGLFFTIAVDVNDNELSYLETIHLFVELLDSYFNNVCELDIVFHFNKVYSILDEFMLAGEIEETSKREILDRVKLLDKME 151

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BLAST of mRNA_M-pyrifera_M_contig8368.19543.1 vs. uniprot
Match: A0A7S0FJC4_9STRA (AP complex subunit sigma n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FJC4_9STRA)

HSP 1 Score: 138 bits (347), Expect = 5.600e-40
Identity = 67/91 (73.63%), Postives = 82/91 (90.11%), Query Frame = 0

Query:    1 FGTYKLIYRRYAGLFFTFGMDTNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILERIRELEKLD 91
            + +YKLIYRRYAGLFFT  +D  DNEL  LET+HLFVELL+SYFSNVCELDIVFNFN+VY ILDE+IL+GE+EE+SK+EIL+R++ LEKL+
Sbjct:   60 YASYKLIYRRYAGLFFTIAVDITDNELSYLETIHLFVELLDSYFSNVCELDIVFNFNRVYMILDEYILAGEIEETSKKEILDRVKVLEKLE 150

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BLAST of mRNA_M-pyrifera_M_contig8368.19543.1 vs. uniprot
Match: A0A024GMS7_9STRA (AP complex subunit sigma n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GMS7_9STRA)

HSP 1 Score: 139 bits (349), Expect = 5.850e-40
Identity = 69/91 (75.82%), Postives = 83/91 (91.21%), Query Frame = 0

Query:    1 FGTYKLIYRRYAGLFFTFGMDTNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILERIRELEKLD 91
            F +YKLIYRRYAGLFF  G+D + NELL+LET+HLFVELL+  FSNVCELDIVFNFNKVY++LDE+IL GEV+E+SKRE+L+RIRELEKL+
Sbjct:   85 FRSYKLIYRRYAGLFFILGVDLHANELLSLETIHLFVELLDQQFSNVCELDIVFNFNKVYSMLDEYILGGEVQETSKREMLDRIRELEKLE 175

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BLAST of mRNA_M-pyrifera_M_contig8368.19543.1 vs. uniprot
Match: B8C940_THAPS (AP complex subunit sigma (Fragment) n=2 Tax=Thalassiosira TaxID=35127 RepID=B8C940_THAPS)

HSP 1 Score: 137 bits (346), Expect = 6.250e-40
Identity = 66/91 (72.53%), Postives = 82/91 (90.11%), Query Frame = 0

Query:    1 FGTYKLIYRRYAGLFFTFGMDTNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILERIRELEKLD 91
            +  YKLIYRRYAGLFFT  +D  DNEL  LE++HLFVELL+SYF+NVCELDIVFNFNKVY+ILDE++L+GE+EE+SK+EIL+R++ LEKLD
Sbjct:   52 YNNYKLIYRRYAGLFFTIAVDVQDNELSYLESIHLFVELLDSYFANVCELDIVFNFNKVYSILDEYMLAGEIEETSKKEILDRVKFLEKLD 142

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig8368.19543.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig8368.19543.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LQX3_ECTSI	5.200e-53	95.60	AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=...	[more]
A0A835YZE0_9STRA	1.300e-46	86.52	AP complex subunit sigma n=1 Tax=Tribonema minus T...	[more]
A0A7S2CS13_9STRA	4.790e-43	78.02	AP complex subunit sigma n=1 Tax=Dictyocha speculu...	[more]
A0A7S3L6S1_9STRA	7.500e-41	74.73	AP complex subunit sigma n=2 Tax=Bacillariophycida...	[more]
A0A6T8NVY6_9STRA	1.650e-40	74.73	AP complex subunit sigma n=1 Tax=Proboscia inermis...	[more]
A0A7S0KX33_9STRA	1.900e-40	75.82	AP complex subunit sigma n=1 Tax=Asterionellopsis ...	[more]
A0A1Z5K077_FISSO	4.070e-40	72.53	AP complex subunit sigma n=1 Tax=Fistulifera solar...	[more]
A0A7S0FJC4_9STRA	5.600e-40	73.63	AP complex subunit sigma n=1 Tax=Minutocellus poly...	[more]
A0A024GMS7_9STRA	5.850e-40	75.82	AP complex subunit sigma n=1 Tax=Albugo candida Ta...	[more]
B8C940_THAPS	6.250e-40	72.53	AP complex subunit sigma (Fragment) n=2 Tax=Thalas...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 4..90 e-value: 2.7E-34 score: 118.1
None	No IPR available	GENE3D	3.30.450.60		coord: 1..91 e-value: 7.9E-36 score: 125.0
None	No IPR available	PANTHER	PTHR11753:SF44	AP-2 COMPLEX SUBUNIT SIGMA	coord: 1..91
IPR016635	Adaptor protein complex, sigma subunit	PANTHER	PTHR11753	CLATHRIN COAT ASSEMBLY PROTEIN	coord: 1..91
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 2..86

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig8368	contig	M-pyrifera_M_contig8368:689..1622 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig8368.19543.1	mRNA_M-pyrifera_M_contig8368.19543.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig8368 689..1622 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig8368.19543.1 ID=prot_M-pyrifera_M_contig8368.19543.1|Name=mRNA_M-pyrifera_M_contig8368.19543.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=92bp
FGTYKLIYRRYAGLFFTFGMDTNDNELLALETVHLFVELLESYFSNVCEL
DIVFNFNKVYNILDEFILSGEVEESSKREILERIRELEKLD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022775	AP_mu_sigma_su
IPR016635	AP_complex_ssu
IPR011012	Longin-like_dom_sf