prot_M-pyrifera_M_contig83611.19531.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig83611.19531.1
Unique Nameprot_M-pyrifera_M_contig83611.19531.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length42
Homology
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BLAST of mRNA_M-pyrifera_M_contig83611.19531.1 vs. uniprot
Match: D7FX21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX21_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 4.510e-13
Identity = 29/39 (74.36%), Postives = 32/39 (82.05%), Query Frame = 0 
Query:    1 ILFLPCAHQCTCERCGGGYLGKPCIICRTPVEIVQKVIK 39
            ILFLPCAHQCTC RCG  Y GKPCI+CR  V+ VQ+VIK
Sbjct:  977 ILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDKVQRVIK 1015
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BLAST of mRNA_M-pyrifera_M_contig83611.19531.1 vs. uniprot
Match: A0A6H5JKP4_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKP4_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 1.900e-12
Identity = 28/39 (71.79%), Postives = 31/39 (79.49%), Query Frame = 0 
Query:    1 ILFLPCAHQCTCERCGGGYLGKPCIICRTPVEIVQKVIK 39
            ILFLPCAH CTC RCG  Y GKPCI+CR  V+ VQ+VIK
Sbjct:  319 ILFLPCAHHCTCSRCGSAYEGKPCILCRRVVDKVQRVIK 357
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BLAST of mRNA_M-pyrifera_M_contig83611.19531.1 vs. uniprot
Match: A0A6H5J8V2_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8V2_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 2.930e-12
Identity = 28/39 (71.79%), Postives = 31/39 (79.49%), Query Frame = 0 
Query:    1 ILFLPCAHQCTCERCGGGYLGKPCIICRTPVEIVQKVIK 39
            ILFLPCAHQCTC RCG G++GKPCIICR  V   Q VI+
Sbjct: 1033 ILFLPCAHQCTCVRCGSGFVGKPCIICRQKVTRAQPVIR 1071
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83611.19531.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FX21_ECTSI4.510e-1374.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKP4_9PHAE1.900e-1271.79RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5J8V2_9PHAE2.930e-1271.79RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 2..32
e-value: 8.9E-8
score: 31.9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..40
e-value: 8.4E-8
score: 33.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83611contigM-pyrifera_M_contig83611:151..276 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83611.19531.1mRNA_M-pyrifera_M_contig83611.19531.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig83611 151..276 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig83611.19531.1 ID=prot_M-pyrifera_M_contig83611.19531.1|Name=mRNA_M-pyrifera_M_contig83611.19531.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=42bp
ILFLPCAHQCTCERCGGGYLGKPCIICRTPVEIVQKVIKHW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD