prot_M-pyrifera_M_contig83443.19487.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig83443.19487.1
Unique Nameprot_M-pyrifera_M_contig83443.19487.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length75
Homology
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BLAST of mRNA_M-pyrifera_M_contig83443.19487.1 vs. uniprot
Match: A0A7C7P1E8_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7C7P1E8_9BACT)

HSP 1 Score: 78.6 bits (192), Expect = 2.350e-16
Identity = 39/63 (61.90%), Postives = 48/63 (76.19%), Query Frame = 0 
Query:    2 LLVDRATAITWSKTMARKGISPMKKVLDKLFGTGTRVAKQAFRAYQNWLERHPPLPIGDVLFK 64
            LLVDR TAI W+KTM  KGISPM K+LDK+F TG +VAK+AF+  ++ L R+P LP  DVL K
Sbjct:  124 LLVDRQTAIEWAKTMTWKGISPMVKILDKVFETGAKVAKKAFQLLRDRLHRNPLLPKWDVLIK 186
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BLAST of mRNA_M-pyrifera_M_contig83443.19487.1 vs. uniprot
Match: A0A0F8Z2B5_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F8Z2B5_9ZZZZ)

HSP 1 Score: 49.3 bits (116), Expect = 3.560e-5
Identity = 23/56 (41.07%), Postives = 37/56 (66.07%), Query Frame = 0 
Query:    2 LLVDRATAITWSKTMARKGISPMKKVLDKLFGTGTRVAKQAFRAYQNWLERHPPLP 57
            LL    TA+ W+KTM  +G++P+  +LD+++ TG R++++AFR     LER   LP
Sbjct:  141 LLSTIETAVQWAKTMTWRGVAPIVHLLDRVYETGVRLSRRAFRPIAARLERSESLP 196
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83443.19487.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7C7P1E8_9BACT2.350e-1661.90Uncharacterized protein n=1 Tax=Gemmatimonadetes b... [more]
A0A0F8Z2B5_9ZZZZ3.560e-541.07Uncharacterized protein n=1 Tax=marine sediment me... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83443contigM-pyrifera_M_contig83443:398..622 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83443.19487.1mRNA_M-pyrifera_M_contig83443.19487.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig83443 398..622 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig83443.19487.1 ID=prot_M-pyrifera_M_contig83443.19487.1|Name=mRNA_M-pyrifera_M_contig83443.19487.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=75bp
GLLVDRATAITWSKTMARKGISPMKKVLDKLFGTGTRVAKQAFRAYQNWL
ERHPPLPIGDVLFKLQPQDETPSR*
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