prot_M-pyrifera_M_contig82849.19354.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig82849.19354.1
Unique Nameprot_M-pyrifera_M_contig82849.19354.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length102
Homology
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BLAST of mRNA_M-pyrifera_M_contig82849.19354.1 vs. uniprot
Match: A0A7Y2DCK2_9ACTN (DUF5317 family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DCK2_9ACTN)

HSP 1 Score: 63.2 bits (152), Expect = 8.530e-10
Identity = 31/90 (34.44%), Postives = 54/90 (60.00%), Query Frame = 0 
Query:   11 MVLTPLAIAIGLVIGFLRGGRFDAVLENRVAAWPLLAAGIVFQTVGESFDVPGRAVVVMVGLLCLIGCAMKNLHIAGAAVAGIGVTLNMA 100
            M+LT +A+A+GL++G L GG FD +    +    L+A G++   + E FD P    +++  LL ++  A  N+H+ G  V  +G+T+N+A
Sbjct:    1 MLLTVIAVAVGLLLGRLSGGGFDRLGSTPIRFPLLMAIGLIVPALAERFDWPATNFIIVAALLAVVAFAGANMHMVGMGVVLVGITMNLA 90
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BLAST of mRNA_M-pyrifera_M_contig82849.19354.1 vs. uniprot
Match: A0A7V9V6S3_9ACTN (DUF5317 domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9V6S3_9ACTN)

HSP 1 Score: 52.4 bits (124), Expect = 5.550e-6
Identity = 28/89 (31.46%), Postives = 47/89 (52.81%), Query Frame = 0 
Query:   14 TPLAIAIGLVIGFLRGGRFDAVLENRVAAWPLLAAGIVFQTVGESFDVPGRAVVVMVGLLCLIGCAMKNLHIAGAAVAGIGVTLNMAVL 102
            T +A+A G++IG L GGR   + +      PLL  G+  Q +G   +     V+++   L L+G A+ N  + G  +  +GV LN+ V+
Sbjct:    4 TLMAVAAGILIGVLTGGRVRHLGDRTFRLLPLLVTGVALQALGVRMESTAGLVMILASYLLLLGFAVANASLVGMWLVALGVALNLLVI 92
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82849.19354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7Y2DCK2_9ACTN8.530e-1034.44DUF5317 family protein n=1 Tax=Acidimicrobiales ba... [more]
A0A7V9V6S3_9ACTN5.550e-631.46DUF5317 domain-containing protein n=1 Tax=Actinomy... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..55
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 79..84
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 56..60
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..101
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 102..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 61..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availableTMHMMTMhelixcoord: 66..88
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 39..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82849contigM-pyrifera_M_contig82849:3..308 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82849.19354.1mRNA_M-pyrifera_M_contig82849.19354.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig82849 3..308 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig82849.19354.1 ID=prot_M-pyrifera_M_contig82849.19354.1|Name=mRNA_M-pyrifera_M_contig82849.19354.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=102bp
MLGSGLEIVDMVLTPLAIAIGLVIGFLRGGRFDAVLENRVAAWPLLAAGI
VFQTVGESFDVPGRAVVVMVGLLCLIGCAMKNLHIAGAAVAGIGVTLNMA
VL
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