prot_M-pyrifera_M_contig80495.18853.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig80495.18853.1
Unique Nameprot_M-pyrifera_M_contig80495.18853.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length57
Homology
BLAST of mRNA_M-pyrifera_M_contig80495.18853.1 vs. uniprot
Match: A0A5A8DP02_CAFRO (RING-type domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DP02_CAFRO)

HSP 1 Score: 75.5 bits (184), Expect = 1.960e-15
Identity = 32/48 (66.67%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    7 TVCKICLGTFEEGERLRLLPCLHQFHTTCADRWLVEKAECPICKTSIR 54
            T C +CL  F  GE LRLLPC+H FH  C DRWL EKAECP+CK+SIR
Sbjct:  144 TRCLVCLEDFVPGETLRLLPCIHFFHAKCIDRWLGEKAECPVCKSSIR 191          
BLAST of mRNA_M-pyrifera_M_contig80495.18853.1 vs. uniprot
Match: A0A5A8CCH3_CAFRO (RING-type domain-containing protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8CCH3_CAFRO)

HSP 1 Score: 75.5 bits (184), Expect = 4.690e-15
Identity = 32/48 (66.67%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    7 TVCKICLGTFEEGERLRLLPCLHQFHTTCADRWLVEKAECPICKTSIR 54
            T C +CL  F  GE LRLLPC+H FH  C DRWL EKAECP+CK+SIR
Sbjct:  200 TRCLVCLEDFVPGETLRLLPCIHFFHAKCIDRWLGEKAECPVCKSSIR 247          
BLAST of mRNA_M-pyrifera_M_contig80495.18853.1 vs. uniprot
Match: A0A118K468_CYNCS (RING-type E3 ubiquitin transferase n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A118K468_CYNCS)

HSP 1 Score: 73.9 bits (180), Expect = 5.800e-15
Identity = 28/58 (48.28%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    1 SPSSKPTVCKICLGTFEEGERLRLLP-CLHQFHTTCADRWLVEKAECPICKTSIRVSA 57
            +PS++ + C ICLG FEEGE++++LP C H +H  C D+WL+ ++ CPIC+TS R+ +
Sbjct:   88 APSTELSECSICLGVFEEGEKVKVLPSCCHCYHCECVDKWLITRSSCPICRTSARIDS 145          
BLAST of mRNA_M-pyrifera_M_contig80495.18853.1 vs. uniprot
Match: A0A251TU41_HELAN (RING-type E3 ubiquitin transferase n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251TU41_HELAN)

HSP 1 Score: 72.4 bits (176), Expect = 1.190e-14
Identity = 28/50 (56.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    9 CKICLGTFEEGERLRLLP-CLHQFHTTCADRWLVEKAECPICKTSIRVSA 57
            C ICLG FEEGE++++LP C H++H  C D+WLV  + CPIC+TS+RV +
Sbjct:  104 CTICLGVFEEGEKVKVLPVCYHRYHCECVDKWLVTHSSCPICRTSVRVDS 153          
BLAST of mRNA_M-pyrifera_M_contig80495.18853.1 vs. uniprot
Match: A0A5N6NGD7_9ASTR (RING-type E3 ubiquitin transferase n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NGD7_9ASTR)

HSP 1 Score: 70.9 bits (172), Expect = 4.260e-14
Identity = 25/50 (50.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:    9 CKICLGTFEEGERLRLLP-CLHQFHTTCADRWLVEKAECPICKTSIRVSA 57
            C ICLG FE+GE++++LP C H++H  C D+WL+ ++ CP+C+TS+RV +
Sbjct:   99 CSICLGVFEDGEKVKVLPVCCHRYHCECVDKWLLTQSSCPVCRTSVRVDS 148          
BLAST of mRNA_M-pyrifera_M_contig80495.18853.1 vs. uniprot
Match: X6NVD9_RETFI (RING-type domain-containing protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NVD9_RETFI)

HSP 1 Score: 71.2 bits (173), Expect = 8.920e-14
Identity = 25/46 (54.35%), Postives = 37/46 (80.43%), Query Frame = 0
Query:    9 CKICLGTFEEGERLRLLPCLHQFHTTCADRWLVEKAECPICKTSIR 54
            C ICL +F+E +R+R+LPC H+FH  CAD+WL++K+ CP+C+  IR
Sbjct:  152 CAICLVSFQERDRIRILPCTHEFHVPCADKWLLQKSTCPVCRLDIR 197          
BLAST of mRNA_M-pyrifera_M_contig80495.18853.1 vs. uniprot
Match: A0A7S1HED0_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HED0_HEMAN)

HSP 1 Score: 70.9 bits (172), Expect = 1.290e-13
Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    9 CKICLGTFEEGERLRLLPCLHQFHTTCADRWLVEKAECPICKTSIR 54
            C ICL  FE+G+ +R+LPCLH +H  CAD+WL     CP+CKT I+
Sbjct:  122 CSICLAAFEDGDEIRMLPCLHPYHKACADQWLSNHTSCPVCKTDIK 167          
BLAST of mRNA_M-pyrifera_M_contig80495.18853.1 vs. uniprot
Match: UPI000740423C (E3 ubiquitin ligase BIG BROTHER-related-like n=1 Tax=Lepisosteus oculatus TaxID=7918 RepID=UPI000740423C)

HSP 1 Score: 71.6 bits (174), Expect = 2.120e-13
Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 0
Query:    3 SSKPTVCKICLGTFEEGERLRLLPCLHQFHTTCADRWLVEKAECPICKTSIRV 55
            S+  T C+IC   + EGE+LR+LPCLH +H  C DRWL E A CP+C+  + +
Sbjct:  255 SAGKTECQICFSDYREGEQLRVLPCLHDYHAKCIDRWLKENASCPVCRVDVTI 307          
BLAST of mRNA_M-pyrifera_M_contig80495.18853.1 vs. uniprot
Match: A0A7S0SWH3_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWH3_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.280e-13
Identity = 29/45 (64.44%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    9 CKICLGTFEEGERLRLLPCLHQFHTTCADRWLVEKAECPICKTSI 53
            C ICLG FE+G+ LR L CLHQFH  C D WL + A CPICK SI
Sbjct:  155 CSICLGPFEDGDTLRTLFCLHQFHLHCVDNWLRQNASCPICKASI 199          
BLAST of mRNA_M-pyrifera_M_contig80495.18853.1 vs. uniprot
Match: UPI001155A5AB (E3 ubiquitin-protein ligase RLIM-like n=1 Tax=Suricata suricatta TaxID=37032 RepID=UPI001155A5AB)

HSP 1 Score: 71.2 bits (173), Expect = 2.570e-13
Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 0
Query:    9 CKICLGTFEEGERLRLLPCLHQFHTTCADRWLVEKAECPICKTSIRVSA 57
            C IC+  + EG R+R+LPC HQFH  C DRWL E + CPIC+T +  SA
Sbjct:  237 CAICITEYTEGNRVRILPCTHQFHVDCVDRWLSENSTCPICRTEVAYSA 285          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80495.18853.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DP02_CAFRO1.960e-1566.67RING-type domain-containing protein n=1 Tax=Cafete... [more]
A0A5A8CCH3_CAFRO4.690e-1566.67RING-type domain-containing protein n=2 Tax=Sar Ta... [more]
A0A118K468_CYNCS5.800e-1548.28RING-type E3 ubiquitin transferase n=1 Tax=Cynara ... [more]
A0A251TU41_HELAN1.190e-1456.00RING-type E3 ubiquitin transferase n=1 Tax=Heliant... [more]
A0A5N6NGD7_9ASTR4.260e-1450.00RING-type E3 ubiquitin transferase n=1 Tax=Mikania... [more]
X6NVD9_RETFI8.920e-1454.35RING-type domain-containing protein n=1 Tax=Reticu... [more]
A0A7S1HED0_HEMAN1.290e-1354.35Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
UPI000740423C2.120e-1349.06E3 ubiquitin ligase BIG BROTHER-related-like n=1 T... [more]
A0A7S0SWH3_9STRA2.280e-1364.44Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
UPI001155A5AB2.570e-1355.10E3 ubiquitin-protein ligase RLIM-like n=1 Tax=Suri... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 8..50
e-value: 0.0042
score: 10.4
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 9..49
e-value: 5.6E-8
score: 42.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 8..50
e-value: 2.2E-13
score: 50.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 9..50
score: 12.283
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..56
e-value: 2.0E-18
score: 67.4
NoneNo IPR availablePANTHERPTHR45931:SF3E3 UBIQUITIN-PROTEIN LIGASE RHY1A-RELATEDcoord: 7..55
NoneNo IPR availablePANTHERPTHR45931FAMILY NOT NAMEDcoord: 7..55
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 8..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80495contigM-pyrifera_M_contig80495:682..852 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80495.18853.1mRNA_M-pyrifera_M_contig80495.18853.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig80495 682..852 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig80495.18853.1 ID=prot_M-pyrifera_M_contig80495.18853.1|Name=mRNA_M-pyrifera_M_contig80495.18853.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=57bp
SPSSKPTVCKICLGTFEEGERLRLLPCLHQFHTTCADRWLVEKAECPICK
TSIRVSA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD