prot_M-pyrifera_M_contig80367.18828.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig80367.18828.1
Unique Nameprot_M-pyrifera_M_contig80367.18828.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length311
Homology
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BLAST of mRNA_M-pyrifera_M_contig80367.18828.1 vs. uniprot
Match: A0A2E7K528_9PLAN (Uncharacterized protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K528_9PLAN)

HSP 1 Score: 231 bits (590), Expect = 2.840e-65
Identity = 231/241 (95.85%), Postives = 235/241 (97.51%), Query Frame = 0 
Query:   26 IQLGSITATGGTTAVNIDNSTAHITIDELNSSNASNSALAVNQLTGSLEVKQGTITNSGVAGVQLTDSTEITLRNLTINTPASNPTGTSITATGTSNLLVASSAINHAGAGXXXXXXXXXXXXXXXQTPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQNAGGSIQLGTITTTNGAVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLNGGTFTSIGTAGAQITDSSNV 266
            IQLGSITATGGTTAVNIDNSTAHITIDELNS+NASNSALAVNQLTGSLEVKQGTITNSGVAGVQLTDSTEITLR+LTINTPASNPTGTSITATGTSNLLVASS+INHAGA XXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QNAGGSIQLGTITTTNGAVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLNGGTFTSIGTAGAQIT+SSNV
Sbjct:  535 IQLGSITATGGTTAVNIDNSTAHITIDELNSTNASNSALAVNQLTGSLEVKQGTITNSGVAGVQLTDSTEITLRDLTINTPASNPTGTSITATGTSNLLVASSSINHAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNAGGSIQLGTITTTNGAVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLNGGTFTSIGTAGAQITNSSNV 775
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BLAST of mRNA_M-pyrifera_M_contig80367.18828.1 vs. uniprot
Match: A0A2D5GZA2_9PLAN (Beta_helix domain-containing protein (Fragment) n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2D5GZA2_9PLAN)

HSP 1 Score: 117 bits (294), Expect = 7.210e-26
Identity = 72/136 (52.94%), Postives = 95/136 (69.85%), Query Frame = 0 
Query:    1 DVTFTDSTITGTGANAVDILNSSGTIQLGSITATGGTTAVNIDNSTAHITIDELNSSNASNSALAVNQLTGSLEVKQGTITNSGVAGVQLTDSTEITLRNLTINTPASNPTGTSITATGTSNLLVASSAINHAGAG 136
            DVTFT+S IT T  + +DI  ++GT+  G IT T GT +VNIDN+ A ITI  L S++ASN+A+  N LTGS  +  GTIT+SGVAGVQ T+S++ITL N TINT  +  +G+SI A G  NL V++ +I H G G
Sbjct:    1 DVTFTNSAITNTNGDGLDIQTAAGTMLFGQITTTNGTNSVNIDNTPADITIAGLTSTDASNTAINFNDLTGSFTLNSGTITDSGVAGVQATNSSDITLDNTTINTALAVGSGSSILANGIGNLTVSNGSITHEGTG 136
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BLAST of mRNA_M-pyrifera_M_contig80367.18828.1 vs. uniprot
Match: A6CCK3_9PLAN (Beta_helix domain-containing protein n=8 Tax=Planctomycetaceae TaxID=126 RepID=A6CCK3_9PLAN)

HSP 1 Score: 78.2 bits (191), Expect = 2.660e-12
Identity = 43/84 (51.19%), Postives = 63/84 (75.00%), Query Frame = 0 
Query:   15 NAVDILNSSGTIQLGSITATGGTTAVNIDNSTAHITIDELNSSNASNSALAVNQLTGSLEVKQGTITNSGVAGVQLTDSTEITL 98
            NAV I NS GTI+ G IT + G+TAV+ID+S+A+ITI ELN+SN + + L +N ++GS+ +  GT+ NSG +GVQ+ DS  +T+
Sbjct:  518 NAVVIANSGGTIEFGQITTSNGSTAVDIDDSSANITIAELNTSNTTLAPLDINNVSGSVTLNGGTLNNSGFSGVQIADSKNVTI 601
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BLAST of mRNA_M-pyrifera_M_contig80367.18828.1 vs. uniprot
Match: A0A517PHG5_9PLAN (Beta_helix domain-containing protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PHG5_9PLAN)

HSP 1 Score: 70.5 bits (171), Expect = 9.530e-10
Identity = 40/77 (51.95%), Postives = 57/77 (74.03%), Query Frame = 0 
Query:   17 VDILNSSGTIQLGSITATGGTTAVNIDNSTAHITIDELNSSNASNSALAVNQLTGSLEVKQGTITNSGVAGVQLTDS 93
            V I NS GTI+ G IT T G+TAV+ID+S+A+ITI ELN+SN + + L +N ++GS+ +  GT  NSG +GVQ+ +S
Sbjct:  522 VVIANSGGTIEFGQITTTNGSTAVDIDDSSANITIAELNTSNTTLAPLDINNVSGSVTLNGGTFNNSGFSGVQIVNS 598
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BLAST of mRNA_M-pyrifera_M_contig80367.18828.1 vs. uniprot
Match: A0A517R9I6_9PLAN (Beta_helix domain-containing protein n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517R9I6_9PLAN)

HSP 1 Score: 62.4 bits (150), Expect = 4.270e-7
Identity = 42/102 (41.18%), Postives = 59/102 (57.84%), Query Frame = 0 
Query:    1 DVTFTDSTITGTGAN-AVDILNSSGTIQLGSITATGGTTAVNIDNSTAHITIDELNSSNASNSALAVNQLTGSLEVKQGTITNSGVAGVQLTDSTEITLRNL 101
            D+ FT+S IT   A     I N+ G++ LG +  TG T  V   N+TA ITIDELNS+ A++        TGS  +  GTI NS  +G Q+ +S  +T+RN+
Sbjct:  504 DIAFTNSPITTNSATYGARIQNAGGSVHLGQMNGTGNTFDVFATNNTAAITIDELNSTGATSLPFTAQGNTGSFTINGGTIANSASSGGQIDNSQNVTVRNV 605
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80367.18828.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2E7K528_9PLAN2.840e-6595.85Uncharacterized protein n=5 Tax=Gimesia TaxID=1649... [more]
A0A2D5GZA2_9PLAN7.210e-2652.94Beta_helix domain-containing protein (Fragment) n=... [more]
A6CCK3_9PLAN2.660e-1251.19Beta_helix domain-containing protein n=8 Tax=Planc... [more]
A0A517PHG5_9PLAN9.530e-1051.95Beta_helix domain-containing protein n=1 Tax=Gimes... [more]
A0A517R9I6_9PLAN4.270e-741.18Beta_helix domain-containing protein n=1 Tax=Gimes... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 286..308
e-value: 9.8
score: 15.1
coord: 1..21
e-value: 2500.0
score: 4.4
coord: 240..262
e-value: 9300.0
score: 0.3
coord: 169..191
e-value: 2.8
score: 16.9
coord: 70..92
e-value: 2700.0
score: 4.1
coord: 46..68
e-value: 5500.0
score: 2.0
coord: 263..285
e-value: 2.7
score: 17.0
coord: 93..117
e-value: 7800.0
score: 0.9
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 109..311
e-value: 2.1E-10
score: 42.2
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 39..196
e-value: 1.2E-7
score: 31.7
coord: 236..308
e-value: 5.8E-6
score: 26.2
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 226..308
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 60..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80367contigM-pyrifera_M_contig80367:11..943 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80367.18828.1mRNA_M-pyrifera_M_contig80367.18828.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig80367 11..943 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig80367.18828.1 ID=prot_M-pyrifera_M_contig80367.18828.1|Name=mRNA_M-pyrifera_M_contig80367.18828.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=311bp
DVTFTDSTITGTGANAVDILNSSGTIQLGSITATGGTTAVNIDNSTAHIT
IDELNSSNASNSALAVNQLTGSLEVKQGTITNSGVAGVQLTDSTEITLRN
LTINTPASNPTGTSITATGTSNLLVASSAINHAGAGTAVSLTNSSGTVTF
DQTPITKDDGLAVSITGGNADITFTGSDITNTDGEGIDIQNAGGSIQLGT
ITTTNGAVSANINGGDADITIAELNSDNASTSPLVINNQTGSFTLNGGTF
TSIGTAGAQITDSSNVTIQGVTMQTPTTYGIYAQNVNNLNLNGNTIIDVS
LDGIYVQNLTG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR012334Pectin_lyas_fold
IPR039448Beta_helix
IPR011050Pectin_lyase_fold/virulence