prot_M-pyrifera_M_contig80357.18826.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig80357.18826.1
Unique Nameprot_M-pyrifera_M_contig80357.18826.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length52
Homology
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BLAST of mRNA_M-pyrifera_M_contig80357.18826.1 vs. uniprot
Match: D7FI23_ECTSI (DUSP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI23_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 4.790e-20
Identity = 36/49 (73.47%), Postives = 40/49 (81.63%), Query Frame = 0 
Query:    1 HNTETKTWGPKPLLRAARREHMGHYRRVNEHVWALWVGSYAGSGPALWV 49
            H+  +K W PKPLLRAARREHMGHYRRVN HVW  W G+Y GSGPA+WV
Sbjct:   84 HDPASKAWVPKPLLRAARREHMGHYRRVNPHVWKKWAGTYRGSGPAIWV 132
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80357.18826.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FI23_ECTSI4.790e-2073.47DUSP domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..51
NoneNo IPR availableTMHMMTMhelixcoord: 32..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80357contigM-pyrifera_M_contig80357:288..443 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80357.18826.1mRNA_M-pyrifera_M_contig80357.18826.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig80357 288..443 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig80357.18826.1 ID=prot_M-pyrifera_M_contig80357.18826.1|Name=mRNA_M-pyrifera_M_contig80357.18826.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=52bp
HNTETKTWGPKPLLRAARREHMGHYRRVNEHVWALWVGSYAGSGPALWVV
R*
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