prot_M-pyrifera_M_contig8034.18825.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8034.18825.1
Unique Nameprot_M-pyrifera_M_contig8034.18825.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length55
Homology
BLAST of mRNA_M-pyrifera_M_contig8034.18825.1 vs. uniprot
Match: A0A6H5KI29_9PHAE (RanBD1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI29_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 8.070e-30
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 0
Query:    1 QVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGELEEITFALRLGNSDSANEFK 55
            +VICNHVADPRIVLKPNAGSDRSWVWNAFDFTEG+LEE+TFALR GNSDSANEFK
Sbjct:  128 KVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEMTFALRFGNSDSANEFK 182          
BLAST of mRNA_M-pyrifera_M_contig8034.18825.1 vs. uniprot
Match: D8LNF2_ECTSI (RanBD1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF2_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 5.250e-28
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 0
Query:    1 QVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGELEEITFALRLGNSDSANEFK 55
            +VICNHVADPRIVLKPNAGSDRSWVWNAFDFTEG+LEE+TFALR GNSDSANEFK
Sbjct:  305 KVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEMTFALRFGNSDSANEFK 359          
BLAST of mRNA_M-pyrifera_M_contig8034.18825.1 vs. uniprot
Match: A0A1Z5JQI1_FISSO (RanBD1 domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQI1_FISSO)

HSP 1 Score: 88.6 bits (218), Expect = 1.340e-21
Identity = 38/55 (69.09%), Postives = 46/55 (83.64%), Query Frame = 0
Query:    1 QVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGELEEITFALRLGNSDSANEFK 55
            +VI NHV DP+I L+PN GSDRSWVW+AFDF EGEL+E  FA+R G+SD ANEF+
Sbjct:    2 KVIANHVVDPKIKLEPNVGSDRSWVWSAFDFAEGELKETIFAIRFGDSDIANEFR 56          
BLAST of mRNA_M-pyrifera_M_contig8034.18825.1 vs. uniprot
Match: A0A835YXP9_9STRA (RanBP1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXP9_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 3.210e-21
Identity = 39/55 (70.91%), Postives = 46/55 (83.64%), Query Frame = 0
Query:    1 QVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGELEEITFALRLGNSDSANEFK 55
            ++I NHVADPRIVLKPN GSDRSWVW A+DF + EL E  FA+R G+SD+ANEFK
Sbjct:  124 KIIANHVADPRIVLKPNLGSDRSWVWTAYDFVDNELVETVFAIRFGSSDAANEFK 178          
BLAST of mRNA_M-pyrifera_M_contig8034.18825.1 vs. uniprot
Match: A0A7S1VE37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VE37_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 8.220e-21
Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    1 QVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGELEEITFALRLGNSDSANEFK 55
            +VICNHV DPRI L+PN GSDRSWVW+AFDF EG+L+E  FA+R  +SD A EFK
Sbjct:  102 KVICNHVLDPRITLEPNVGSDRSWVWSAFDFAEGDLKETVFAIRFSSSDVAKEFK 156          
BLAST of mRNA_M-pyrifera_M_contig8034.18825.1 vs. uniprot
Match: A0A7S3Q898_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q898_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 8.360e-21
Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    1 QVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGELEEITFALRLGNSDSANEFK 55
            +VI NH  DPRI+L PNAGSDRSWVW+AFDF EGEL+E  FALR  +S+ A+EFK
Sbjct:   11 KVITNHALDPRIILNPNAGSDRSWVWSAFDFAEGELKETVFALRFADSEIADEFK 65          
BLAST of mRNA_M-pyrifera_M_contig8034.18825.1 vs. uniprot
Match: A0A8J2T1Z3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1Z3_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.460e-20
Identity = 37/55 (67.27%), Postives = 46/55 (83.64%), Query Frame = 0
Query:    1 QVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGELEEITFALRLGNSDSANEFK 55
            ++ICNHV DPRI L+PN GSDRSWVW+A+DF+ GELE+  FA+R GNSD A E+K
Sbjct:  174 KIICNHVVDPRIELEPNVGSDRSWVWSAWDFSSGELEDTIFAIRFGNSDGAKEYK 228          
BLAST of mRNA_M-pyrifera_M_contig8034.18825.1 vs. uniprot
Match: A0A1Z5JPA6_FISSO (Ran-binding protein 1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPA6_FISSO)

HSP 1 Score: 88.6 bits (218), Expect = 1.820e-20
Identity = 38/55 (69.09%), Postives = 46/55 (83.64%), Query Frame = 0
Query:    1 QVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGELEEITFALRLGNSDSANEFK 55
            +VI NHV DP+I L+PN GSDRSWVW+AFDF EGEL+E  FA+R G+SD ANEF+
Sbjct:  108 KVIANHVVDPKIKLEPNVGSDRSWVWSAFDFAEGELKETIFAIRFGDSDIANEFR 162          
BLAST of mRNA_M-pyrifera_M_contig8034.18825.1 vs. uniprot
Match: B8CAX3_THAPS (RanGAP, ran-binding protein 1-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAX3_THAPS)

HSP 1 Score: 87.8 bits (216), Expect = 2.250e-20
Identity = 39/55 (70.91%), Postives = 44/55 (80.00%), Query Frame = 0
Query:    1 QVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGELEEITFALRLGNSDSANEFK 55
            +VI NH  DPRIVL+PNAGSDRSWVW+ FDF +GELEE  FALR  NS+ A EFK
Sbjct:  126 KVIANHALDPRIVLEPNAGSDRSWVWSCFDFADGELEEKVFALRFANSEVAGEFK 180          
BLAST of mRNA_M-pyrifera_M_contig8034.18825.1 vs. uniprot
Match: A0A6S8ZTG3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZTG3_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 3.470e-20
Identity = 38/55 (69.09%), Postives = 46/55 (83.64%), Query Frame = 0
Query:    1 QVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGELEEITFALRLGNSDSANEFK 55
            +VI NH  DPRI L+PNAGSDRSWVW+AFDF++GELEE  FALR  +S+ AN+FK
Sbjct:  108 KVIANHAVDPRIKLEPNAGSDRSWVWSAFDFSDGELEETVFALRFADSEIANDFK 162          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8034.18825.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KI29_9PHAE8.070e-3092.73RanBD1 domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LNF2_ECTSI5.250e-2892.73RanBD1 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A1Z5JQI1_FISSO1.340e-2169.09RanBD1 domain-containing protein n=1 Tax=Fistulife... [more]
A0A835YXP9_9STRA3.210e-2170.91RanBP1 domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S1VE37_9STRA8.220e-2169.09Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7S3Q898_9STRA8.360e-2169.09Hypothetical protein (Fragment) n=2 Tax=Chaetocero... [more]
A0A8J2T1Z3_9STRA1.460e-2067.27Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1Z5JPA6_FISSO1.820e-2069.09Ran-binding protein 1 n=1 Tax=Fistulifera solaris ... [more]
B8CAX3_THAPS2.250e-2070.91RanGAP, ran-binding protein 1-like protein (Fragme... [more]
A0A6S8ZTG3_9STRA3.470e-2069.09Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000156Ran binding domainPFAMPF00638Ran_BP1coord: 2..55
e-value: 8.6E-11
score: 42.2
IPR000156Ran binding domainPROSITEPS50196RANBD1coord: 1..55
score: 11.216
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 1..55
e-value: 8.4E-11
score: 43.5
NoneNo IPR availablePANTHERPTHR23138:SF94RAN-SPECIFIC GTPASE-ACTIVATING PROTEINcoord: 2..55
NoneNo IPR availablePANTHERPTHR23138RAN BINDING PROTEINcoord: 2..55
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 1..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8034contigM-pyrifera_M_contig8034:11711..11875 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8034.18825.1mRNA_M-pyrifera_M_contig8034.18825.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8034 11711..11875 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8034.18825.1 ID=prot_M-pyrifera_M_contig8034.18825.1|Name=mRNA_M-pyrifera_M_contig8034.18825.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=55bp
QVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGELEEITFALRLGNSDS
ANEFK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000156Ran_bind_dom
IPR011993PH-like_dom_sf