prot_M-pyrifera_M_contig80280.18808.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig80280.18808.1
Unique Nameprot_M-pyrifera_M_contig80280.18808.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length133
Homology
BLAST of mRNA_M-pyrifera_M_contig80280.18808.1 vs. uniprot
Match: A0A7S0ZFM6_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZFM6_9RHOD)

HSP 1 Score: 112 bits (280), Expect = 1.840e-29
Identity = 62/116 (53.45%), Postives = 80/116 (68.97%), Query Frame = 0
Query:   12 GVSMQAKFDATER-TVQGFSGGQKSLLALALILAIQRCDPAPFYLLDEADAALDTTYRAALAKMIRKQTN--TQFILTTFHRETAEAGDAFFGVYAQARESKMRRQTKEQAIGFLV 124
            GV+M+  FD  E   +Q  SGGQKSL+ALALI AIQR DPAPFY  DE DA LD T+RAA+A +I+ Q +  TQF+ TTF  E   AGD +FGV  + + S + + TKEQA+ F++
Sbjct:    2 GVAMKVSFDGNETYLIQQLSGGQKSLVALALIFAIQRLDPAPFYFFDEIDANLDATHRAAVAGLIQSQASKGTQFVTTTFRPEFVNAGDVWFGVSHRNKISSVDQVTKEQALEFIL 117          
BLAST of mRNA_M-pyrifera_M_contig80280.18808.1 vs. uniprot
Match: A0A8H7SQ93_9FUNG (SMC hinge domain-containing protein (Fragment) n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SQ93_9FUNG)

HSP 1 Score: 115 bits (287), Expect = 3.910e-27
Identity = 63/122 (51.64%), Postives = 81/122 (66.39%), Query Frame = 0
Query:    6 SLATFQGVSMQAKFDATE---RTVQGFSGGQKSLLALALILAIQRCDPAPFYLLDEADAALDTTYRAALAKMIRKQTNT-QFILTTFHRETAEAGDAFFGVYAQARESKMRRQTKEQAIGFL 123
            S+  + G+S+Q  F++      T+Q  SGGQKSL+ALALI AIQRCDPAPFYL DE DA LD  YR A+A+MI K + + QFI TTF  E     D F+GV  Q + S++   TKE A+GF+
Sbjct: 1066 SVDRYSGISIQVSFNSKSDEGMTMQQLSGGQKSLVALALIFAIQRCDPAPFYLFDEIDANLDAQYRTAVAEMIHKLSESAQFITTTFRSELLANADKFYGVTFQGKVSRIHAITKENALGFI 1187          
BLAST of mRNA_M-pyrifera_M_contig80280.18808.1 vs. uniprot
Match: A0A183E3X7_9BILA (SMC_N domain-containing protein n=1 Tax=Gongylonema pulchrum TaxID=637853 RepID=A0A183E3X7_9BILA)

HSP 1 Score: 107 bits (266), Expect = 6.140e-27
Identity = 59/126 (46.83%), Postives = 82/126 (65.08%), Query Frame = 0
Query:    1 KSKLPSLATFQGVSMQAKFDATERTV--QGFSGGQKSLLALALILAIQRCDPAPFYLLDEADAALDTTYRAALAKMIRKQT-NTQFILTTFHRETAEAGDAFFGVYAQARESKMRRQTKEQAIGFL 123
            ++ LP + TF GV+++  F   +  +  Q  SGGQKSL+ALALI AIQ+CDPAPFYL DE DAALD  +R A+A MI + + N QFI TTF  E  +  + +FGV  + + S +   +K+QA  F+
Sbjct:   24 QADLPRVETFTGVAIRVSFTGEDDNLEMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDAALDAQHRKAVADMIHELSQNAQFITTTFRPELLDNAEKYFGVLFRNKVSHINAVSKQQAFDFV 149          
BLAST of mRNA_M-pyrifera_M_contig80280.18808.1 vs. uniprot
Match: UPI00106C7B2D (structural maintenance of chromosomes protein 3-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C7B2D)

HSP 1 Score: 114 bits (285), Expect = 7.280e-27
Identity = 69/126 (54.76%), Postives = 82/126 (65.08%), Query Frame = 0
Query:    2 SKLPSLATFQGVSMQAKF---DATERTVQGFSGGQKSLLALALILAIQRCDPAPFYLLDEADAALDTTYRAALAKMIRKQTN-TQFILTTFHRETAEAGDAFFGVYAQARESKMRRQTKEQAIGFL 123
            SKLPS   F GVS++  F    A  R +   SGGQKSL+ALALI AIQRCDPAPFYL DE D ALD  YR ++A+MIRKQ    QFI TTF  E  EA D F+GV  + + S +   TKE+A  F+
Sbjct: 1087 SKLPS-DKFSGVSIKVSFTGKSAETREMNQLSGGQKSLVALALIFAIQRCDPAPFYLFDEIDQALDPQYRTSVAEMIRKQAEKAQFITTTFRAELLEASDKFYGVRFRNKVSHIDAITKEKAKEFV 1211          
BLAST of mRNA_M-pyrifera_M_contig80280.18808.1 vs. uniprot
Match: A0A8H7RLH5_9FUNG (Structural maintenance of chromosomes protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7RLH5_9FUNG)

HSP 1 Score: 114 bits (284), Expect = 9.910e-27
Identity = 63/128 (49.22%), Postives = 80/128 (62.50%), Query Frame = 0
Query:    6 SLATFQGVSMQAKFDATE---RTVQGFSGGQKSLLALALILAIQRCDPAPFYLLDEADAALDTTYRAALAKMIRKQT-NTQFILTTFHRETAEAGDAFFGVYAQARESKMRRQTKEQAIGFLVAYEGK 129
            S+  + G+S+Q  F++       +Q  SGGQKSL+ALALI AIQRCDPAPFYL DE DA LD  YR A+A MI K + N QFI TTF  E     + F+GV  Q + S++   TKE A+GF+     K
Sbjct: 1060 SIDRYSGISIQVSFNSKSDEGMIMQQLSGGQKSLVALALIFAIQRCDPAPFYLFDEIDANLDAQYRTAVADMIHKMSENAQFITTTFRSELLTNANKFYGVTFQGKVSRIHATTKENALGFVEMVSNK 1187          
BLAST of mRNA_M-pyrifera_M_contig80280.18808.1 vs. uniprot
Match: A0A2G8LGK2_STIJA (Putative structural maintenance of chromosomes protein 3 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LGK2_STIJA)

HSP 1 Score: 107 bits (267), Expect = 1.180e-26
Identity = 63/126 (50.00%), Postives = 80/126 (63.49%), Query Frame = 0
Query:    2 SKLPSLATFQGVSMQAKFDATE---RTVQGFSGGQKSLLALALILAIQRCDPAPFYLLDEADAALDTTYRAALAKMIRKQT-NTQFILTTFHRETAEAGDAFFGVYAQARESKMRRQTKEQAIGFL 123
            S++P +  F GV ++  F       R +Q  SGGQKSL+AL LI AIQ+CDPAPFYL DE D+ALD  +R A+A MI + + N QFI TTF  E  EA D F+GV  + + S +   TKEQA  FL
Sbjct:   62 SQIPLVEQFTGVGIKVSFTGKSGETREMQQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDSALDAQHRKAVADMIHELSDNAQFITTTFRPELLEACDKFYGVKFRNKVSHIDVITKEQAKDFL 187          
BLAST of mRNA_M-pyrifera_M_contig80280.18808.1 vs. uniprot
Match: A0A3P8H9P8_9TREM (SMC_N domain-containing protein n=2 Tax=Echinostoma caproni TaxID=27848 RepID=A0A3P8H9P8_9TREM)

HSP 1 Score: 106 bits (264), Expect = 1.230e-26
Identity = 60/126 (47.62%), Postives = 79/126 (62.70%), Query Frame = 0
Query:    2 SKLPSLATFQGVSMQAKF---DATERTVQGFSGGQKSLLALALILAIQRCDPAPFYLLDEADAALDTTYRAALAKMIRK-QTNTQFILTTFHRETAEAGDAFFGVYAQARESKMRRQTKEQAIGFL 123
            S +P +  F GV ++  F    A  R +   SGGQKSL+AL LI AIQ+CDPAPFYL DE DAALD  YR A+A MIR  ++  QFI TTF  E  E+ + F+GV  + + S +   TK +A+ F+
Sbjct:   24 SAIPDVERFTGVGIRVSFTGDSADMRDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDAQYRKAVADMIRDLKSEAQFITTTFRPELLESAEKFYGVKFRNKVSHIECVTKGEALDFV 149          
BLAST of mRNA_M-pyrifera_M_contig80280.18808.1 vs. uniprot
Match: A0A3S5CC76_9PLAT (Hypothetical protein n=1 Tax=Protopolystoma xenopodis TaxID=117903 RepID=A0A3S5CC76_9PLAT)

HSP 1 Score: 105 bits (263), Expect = 1.650e-26
Identity = 59/126 (46.83%), Postives = 79/126 (62.70%), Query Frame = 0
Query:    2 SKLPSLATFQGVSMQAKF---DATERTVQGFSGGQKSLLALALILAIQRCDPAPFYLLDEADAALDTTYRAALAKMIRK-QTNTQFILTTFHRETAEAGDAFFGVYAQARESKMRRQTKEQAIGFL 123
            S +P +  F GV ++  F    A  R +   SGGQKSL+AL LI AIQ+CDPAPFYL DE DAALD  YR A+A MIR  ++  QFI TTF  E  E+ + ++GV  + + S +   TK +A+ F+
Sbjct:   22 SAIPDIERFTGVGIRVSFTGDSADMRDMNQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDAALDAQYRKAVADMIRDLKSEAQFITTTFRPELLESSEKYYGVKFRNKVSHIECVTKAEALDFV 147          
BLAST of mRNA_M-pyrifera_M_contig80280.18808.1 vs. uniprot
Match: A0A1C7NBX1_9FUNG (Structural maintenance of chromosomes protein n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NBX1_9FUNG)

HSP 1 Score: 113 bits (282), Expect = 1.840e-26
Identity = 63/122 (51.64%), Postives = 80/122 (65.57%), Query Frame = 0
Query:    6 SLATFQGVSMQAKFDATE---RTVQGFSGGQKSLLALALILAIQRCDPAPFYLLDEADAALDTTYRAALAKMIRKQTN-TQFILTTFHRETAEAGDAFFGVYAQARESKMRRQTKEQAIGFL 123
            S+  + GVS+Q  F++       +Q  SGGQKSL+ALALI AIQRCDPAPFYL DE DA LD  YRAA+A MI + ++  QFI TTF  E     D F+GV  Q + S++   TKE A+GF+
Sbjct: 1044 SVDRYSGVSIQVSFNSKSDEGMIMQQLSGGQKSLVALALIFAIQRCDPAPFYLFDEIDANLDAQYRAAVADMIHRMSDKAQFITTTFRPELLSNADKFYGVTFQGKVSRIHAITKENALGFV 1165          
BLAST of mRNA_M-pyrifera_M_contig80280.18808.1 vs. uniprot
Match: A0A7S0NT65_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NT65_9EUKA)

HSP 1 Score: 105 bits (261), Expect = 2.440e-26
Identity = 59/135 (43.70%), Postives = 80/135 (59.26%), Query Frame = 0
Query:    8 ATFQGVSMQAKF--DATERTVQGFSGGQKSLLALALILAIQRCDPAPFYLLDEADAALDTTYRAALAKMIRKQTN-----------TQFILTTFHRETAEAGDAFFGVYAQARESKMRRQTKEQAIGFLVAYEGK 129
            AT+ G+S++ +F   A   T+   SGGQK+++AL LI AIQRCDPAPFY+ DE DA LD  +RA+LAKMI +Q             TQFI TTF  E    GD F+GV  + + S +R   K +A+  +   E +
Sbjct:    1 ATYSGISIKVQFVGGADTYTMAQLSGGQKTMVALCLIFAIQRCDPAPFYIFDEIDANLDAAHRASLAKMIERQAAETDVSGEDRPPTQFITTTFRPELIHTGDKFYGVTHRNKASSIRAVEKSEALRIITESESR 135          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80280.18808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0ZFM6_9RHOD1.840e-2953.45Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A8H7SQ93_9FUNG3.910e-2751.64SMC hinge domain-containing protein (Fragment) n=1... [more]
A0A183E3X7_9BILA6.140e-2746.83SMC_N domain-containing protein n=1 Tax=Gongylonem... [more]
UPI00106C7B2D7.280e-2754.76structural maintenance of chromosomes protein 3-li... [more]
A0A8H7RLH5_9FUNG9.910e-2749.22Structural maintenance of chromosomes protein n=1 ... [more]
A0A2G8LGK2_STIJA1.180e-2650.00Putative structural maintenance of chromosomes pro... [more]
A0A3P8H9P8_9TREM1.230e-2647.62SMC_N domain-containing protein n=2 Tax=Echinostom... [more]
A0A3S5CC76_9PLAT1.650e-2646.83Hypothetical protein n=1 Tax=Protopolystoma xenopo... [more]
A0A1C7NBX1_9FUNG1.840e-2651.64Structural maintenance of chromosomes protein n=1 ... [more]
A0A7S0NT65_9EUKA2.440e-2643.70Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 3..131
e-value: 1.2E-33
score: 118.0
NoneNo IPR availablePANTHERPTHR43977FAMILY NOT NAMEDcoord: 8..122
IPR003395RecF/RecN/SMC, N-terminalPFAMPF02463SMC_Ncoord: 28..107
e-value: 2.6E-27
score: 95.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 21..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80280contigM-pyrifera_M_contig80280:539..937 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80280.18808.1mRNA_M-pyrifera_M_contig80280.18808.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig80280 539..937 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig80280.18808.1 ID=prot_M-pyrifera_M_contig80280.18808.1|Name=mRNA_M-pyrifera_M_contig80280.18808.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp
KSKLPSLATFQGVSMQAKFDATERTVQGFSGGQKSLLALALILAIQRCDP
APFYLLDEADAALDTTYRAALAKMIRKQTNTQFILTTFHRETAEAGDAFF
GVYAQARESKMRRQTKEQAIGFLVAYEGKKKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003395RecF/RecN/SMC_N
IPR027417P-loop_NTPase