prot_M-pyrifera_M_contig80271.18806.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig80271.18806.1
Unique Name	prot_M-pyrifera_M_contig80271.18806.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	246

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig80271.18806.1 vs. uniprot
Match: UPI00155FB900 (interferon-induced protein 44-like n=2 Tax=Acipenser ruthenus TaxID=7906 RepID=UPI00155FB900)

HSP 1 Score: 55.8 bits (133), Expect = 1.310e-5
Identity = 55/209 (26.32%), Postives = 100/209 (47.85%), Query Frame = 0

Query:   32 TLNILTIGERGSGKSSYLNAMLSTVRQ-----RLTELFHAAPSAGDVTTKQSNLSLEPFGLKMGIRDVPGWTSSSNWPTYMRLLRCIISGRTRDQEDLLPLTEDLLL-RLEARPAASFEHQIHCIVILRSI---EDDRPAFVEKVTSIVQEF-DTRVPVMVLLTKVDTKLAANATLENVHAMEDFEGARLKLAKDVCIEANRVLPLASY 230
            T NIL  G  GSGKSS+LN++LS +R+     R+  +    P A    T+  +L    F  KM I D  G+         + +L+ II G   +        +D+L  ++E         +IHC+V++ S+   E+  PA ++     +    +T VP  +L+T +D  +     L++++   D +     +AK++ I  + +L +++Y
Sbjct:   48 TTNILISGNVGSGKSSFLNSVLSELRREELNGRVQNIQAVRPGAQTSVTQ--HLKCHKFIDKMKIFDTAGFELEKTVNATI-ILKKIIDGEVAEGTKF----DDILKSKMEG-------DKIHCVVLVLSLHTAENMHPALIQFYEQFIGMLTETGVPCQLLVTFIDKLVEKTEDLKSLYRRRDMKQKIENIAKNMRISVSNILVVSNY 242

[Close]

BLAST of mRNA_M-pyrifera_M_contig80271.18806.1 vs. uniprot
Match: UPI0015600AF8 (interferon-induced protein 44-like n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=UPI0015600AF8)

HSP 1 Score: 55.5 bits (132), Expect = 1.890e-5
Identity = 58/209 (27.75%), Postives = 97/209 (46.41%), Query Frame = 0

Query:   31 HTLNILTIGERGSGKSSYLNAMLSTVRQ-----RLTELFHAAPSAGDVTTKQSNLSLEPFGLKMGIRDVPGWTSSSNWPTYMRLLRCIISGRTRDQEDLLPLTEDLLLRLEARPAASFEHQIHCIVILRSI---EDDRPAFVEKVTSIVQEF-DTRVPVMVLLTKVDTKLAANATLENVHAMEDFEGARLKLAKDVCIEANRVLPLASY 230
            +T NIL  G  GSGKSS+LN++LS +R+     R+  L    P A    T++  L    F  K+ I D  G+         + +L+ II G   +         D +L+ +         +IHC+V++ S+   E+  PA ++     +    +T VP  +L+T VD  +     L+N++   D +     LAK + I    VL +++Y
Sbjct:   59 YTTNILISGSVGSGKSSFLNSVLSELRRKEFNGRVQTLQAVRPGAQTSVTQR--LRCHKFIEKIKIFDTAGFELEKTVNATI-ILKKIIDGEVAEGTKF-----DNILKSKMEG-----DKIHCVVLVLSLHTAENMDPALIQFYEQFIGMLTETEVPCQLLVTFVDKLVEKTEDLKNLYRRRDIKQKIEMLAKKMRISMCNVLVVSNY 254

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig80271.18806.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig80271.18806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
UPI00155FB900	1.310e-5	26.32	interferon-induced protein 44-like n=2 Tax=Acipens...	[more]
UPI0015600AF8	1.890e-5	27.75	interferon-induced protein 44-like n=1 Tax=Acipens...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 12..226 e-value: 9.9E-12 score: 46.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 17..199

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig80271	contig	M-pyrifera_M_contig80271:210..947 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig80271.18806.1	mRNA_M-pyrifera_M_contig80271.18806.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig80271 210..947 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig80271.18806.1 ID=prot_M-pyrifera_M_contig80271.18806.1|Name=mRNA_M-pyrifera_M_contig80271.18806.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=246bp
MDWTANGRKVLLRNVKEFRAYAPSLANSSEHTLNILTIGERGSGKSSYLN
AMLSTVRQRLTELFHAAPSAGDVTTKQSNLSLEPFGLKMGIRDVPGWTSS
SNWPTYMRLLRCIISGRTRDQEDLLPLTEDLLLRLEARPAASFEHQIHCI
VILRSIEDDRPAFVEKVTSIVQEFDTRVPVMVLLTKVDTKLAANATLENV
HAMEDFEGARLKLAKDVCIEANRVLPLASYGGGVSYPHIHVEILVL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase