prot_M-pyrifera_M_contig80128.18779.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig80128.18779.1
Unique Nameprot_M-pyrifera_M_contig80128.18779.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length58
Homology
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BLAST of mRNA_M-pyrifera_M_contig80128.18779.1 vs. uniprot
Match: D8LAZ3_ECTSI (L-type lectin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAZ3_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 1.740e-24
Identity = 48/58 (82.76%), Postives = 54/58 (93.10%), Query Frame = 0 
Query:    1 RFVSFIANNGTRTTEDVRMLANSCASTLRYYERRDDFNFLKSSRVRLGYHDGAVTLEV 58
            +FVSFIANNGTRTTEDVRM ANSCASTLRYY+ RDDFNFLK SR+RLGY+DG ++LEV
Sbjct:  191 QFVSFIANNGTRTTEDVRMAANSCASTLRYYQGRDDFNFLKMSRIRLGYYDGEISLEV 248
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BLAST of mRNA_M-pyrifera_M_contig80128.18779.1 vs. uniprot
Match: A0A835ZHK2_9STRA (L-type lectin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHK2_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 1.790e-5
Identity = 26/59 (44.07%), Postives = 34/59 (57.63%), Query Frame = 0 
Query:    1 RFVSFIANNGTRTTEDVRMLANSCASTLRYYERRDDFNFLKSSRVRLGYH-DGAVTLEV 58
            R +S + NNG +    V      C + LRY+E RDDF  LKSSR+RL +  D  + LEV
Sbjct:   25 RDISMVTNNGRKGGAQVMTELQGCNANLRYWEGRDDFTVLKSSRLRLRFSSDNTLILEV 83
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80128.18779.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LAZ3_ECTSI1.740e-2482.76L-type lectin-like domain-containing protein n=2 T... [more]
A0A835ZHK2_9STRA1.790e-544.07L-type lectin-like domain-containing protein n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80128contigM-pyrifera_M_contig80128:113..286 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80128.18779.1mRNA_M-pyrifera_M_contig80128.18779.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig80128 113..286 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig80128.18779.1 ID=prot_M-pyrifera_M_contig80128.18779.1|Name=mRNA_M-pyrifera_M_contig80128.18779.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=58bp
RFVSFIANNGTRTTEDVRMLANSCASTLRYYERRDDFNFLKSSRVRLGYH
DGAVTLEV
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